[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
3401	202484_s_at	AF072242	MBD2		methyl-CpG binding domain protein 2

Fetching correlation data, please wait...
Getting list of correlations for id 3401.
Getting list of p-values for id 3401.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.130 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	202484_s_at	203513_at	NM_025137	SPG11	0.621320	2.859621e-10	6.610585e-6	6.610585e-6
2	202484_s_at	230264_s_at	AA551090	AP1S2	0.607046	9.272249e-10	2.143466e-5	1.071733e-5
3	202484_s_at	202391_at	NM_006317	BASP1	0.601046	1.494423e-9	3.454658e-5	1.151553e-5
4	202484_s_at	1557828_a_at	BE675061	C5orf28	0.585824	4.803861e-9	1.110509e-4	2.776271e-5
5	202484_s_at	209239_at	M55643	NFKB1	0.564220	2.280263e-8	5.271284e-4	1.054257e-4
6	202484_s_at	214429_at	U47635	MTMR6	0.563351	2.422014e-8	5.598969e-4	9.331616e-5
7	202484_s_at	202370_s_at	NM_001755	CBFB	0.560464	2.955929e-8	6.833220e-4	9.761743e-5
8	202484_s_at	225558_at	R38084	GIT2	0.560353	2.978439e-8	6.885258e-4	8.606573e-5
9	202484_s_at	221808_at	NM_004251	RAB9A	0.560325	2.984149e-8	6.898456e-4	7.664951e-5
10	202484_s_at	209106_at	BF576458	NCOA1	0.558619	3.353937e-8	7.753297e-4	7.753297e-5
11	202484_s_at	208743_s_at	BC001359	YWHAB	0.558155	3.461590e-8	8.002157e-4	7.274689e-5
12	202484_s_at	218761_at	NM_017610	RNF111	0.555349	4.187435e-8	9.680093e-4	8.066744e-5
13	202484_s_at	55692_at	W22924	ELMO2	0.553276	4.814501e-8	1.112968e-3	8.561293e-5
14	202484_s_at	221840_at	AA775177	PTPRE	0.551980	5.250645e-8	1.213792e-3	8.669940e-5
15	202484_s_at	223592_s_at	BC005084	RNF135	0.547954	6.858143e-8	1.585397e-3	1.056931e-4
16	202484_s_at	212051_at	AA676803	WIPF2	0.545446	8.085606e-8	1.869150e-3	1.168219e-4
17	202484_s_at	217827_s_at	NM_016630	SPG21	0.543599	9.119674e-8	2.108195e-3	1.240115e-4
18	202484_s_at	207643_s_at	NM_001065	TNFRSF1A	0.542356	9.885441e-8	2.285217e-3	1.269565e-4
19	202484_s_at	224810_s_at	AL569476	ANKRD13A	0.541446	1.048394e-7	2.423571e-3	1.275564e-4
20	202484_s_at	234950_s_at	AK001278	RFWD2	0.538690	1.251482e-7	2.893052e-3	1.446526e-4
21	202484_s_at	209721_s_at	BC002857	IFFO1	0.536800	1.411779e-7	3.263609e-3	1.554100e-4
22	202484_s_at	212124_at	AF070622	ZMIZ1	0.536500	1.438927e-7	3.326367e-3	1.511985e-4
23	202484_s_at	31845_at	U32645	ELF4	0.534863	1.596074e-7	3.689645e-3	1.604194e-4
24	202484_s_at	225703_at	AL583509	FBRSL1	0.531060	2.026504e-7	4.684669e-3	1.951945e-4
25	202484_s_at	223017_at	AF131758	TXNDC12	0.528811	2.330659e-7	5.387785e-3	2.155114e-4
26	202484_s_at	219032_x_at	NM_014322	OPN3	0.527528	2.523017e-7	5.832459e-3	2.243253e-4
27	202484_s_at	235352_at	AI270356		0.524998	2.947377e-7	6.813451e-3	2.523500e-4
28	202484_s_at	240600_at	AI342146		0.524195	3.095588e-7	7.156071e-3	2.555740e-4
29	202484_s_at	209444_at	BC001851	RAP1GDS1	0.523469	3.235614e-7	7.479769e-3	2.579231e-4
30	202484_s_at	222537_s_at	W44413	CDC42SE1	0.522838	3.362255e-7	7.772526e-3	2.590842e-4
31	202484_s_at	218467_at	NM_020232	PSMG2	0.522220	3.490784e-7	8.069646e-3	2.603112e-4
32	202484_s_at	218676_s_at	NM_021213	PCTP	0.522206	3.493677e-7	8.076333e-3	2.523854e-4
33	202484_s_at	204336_s_at	NM_005873	RGS19	0.522185	3.498136e-7	8.086642e-3	2.450497e-4
34	202484_s_at	232583_at	AW136457		0.522169	3.501664e-7	8.094796e-3	2.380822e-4
35	202484_s_at	225224_at	AL034550	C20orf112	0.521425	3.662918e-7	8.467568e-3	2.419305e-4
36	202484_s_at	238462_at	AI418293	UBASH3B	0.520093	3.969642e-7	9.176621e-3	2.549061e-4
37	202484_s_at	208933_s_at	AI659005	LGALS8	0.517846	4.542701e-7	1.050136e-2	2.838206e-4
38	202484_s_at	225336_at	AV714014	SRSF2IP	0.516131	5.032171e-7	1.163287e-2	3.061281e-4
39	202484_s_at	223157_at	BC004894	C4orf14	0.515676	5.170135e-7	1.195180e-2	3.064564e-4
40	202484_s_at	215785_s_at	AL161999	CYFIP2	0.514665	5.489553e-7	1.269020e-2	3.172550e-4
41	202484_s_at	225313_at	AI627538		0.514629	5.501192e-7	1.271710e-2	3.101733e-4
42	202484_s_at	217738_at	BF575514	NAMPT	0.512264	6.324444e-7	1.462022e-2	3.481004e-4
43	202484_s_at	209685_s_at	M13975	PRKCB	0.511653	6.555434e-7	1.515420e-2	3.524232e-4
44	202484_s_at	242509_at	R71072		0.510393	7.057022e-7	1.631372e-2	3.707663e-4
45	202484_s_at	237262_at	AI912190		-0.509778	7.314775e-7	1.690957e-2	3.757681e-4
46	202484_s_at	226298_at	BE394201	RUNDC1	0.509703	7.346578e-7	1.698308e-2	3.691975e-4
47	202484_s_at	203300_x_at	NM_003916	AP1S2	0.508695	7.790340e-7	1.800893e-2	3.831687e-4
48	202484_s_at	201371_s_at	AF062537	CUL3	0.508473	7.891791e-7	1.824345e-2	3.800719e-4
49	202484_s_at	222732_at	BF514859	TRIM39	0.508072	8.077272e-7	1.867223e-2	3.810659e-4
50	202484_s_at	200850_s_at	NM_006621	AHCYL1	0.507350	8.422054e-7	1.946926e-2	3.893852e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation