[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5690	205904_at	NM_000247	MICA		MHC class I polypeptide-related sequence A

Fetching correlation data, please wait...
Getting list of correlations for id 5690.
Getting list of p-values for id 5690.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.118 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	205904_at	230937_at	AW008207	LOC285835	0.621870	2.729562e-10	6.309929e-6	6.309929e-6
2	205904_at	235829_at	AW003893		0.451061	1.662425e-5	3.843027e-1	1.921514e-1
3	205904_at	205083_at	NM_001159	AOX1	0.443959	2.336083e-5	5.400323e-1	1.800108e-1
4	205904_at	225293_at	AK021957	COL27A1	0.428438	4.787818e-5	1.106800e+0	2.767000e-1
5	205904_at	201460_at	AI141802	MAPKAPK2	0.418936	7.304334e-5	1.688543e+0	3.377086e-1
6	205904_at	222913_at	AF285837	KLF3	-0.411232	1.019407e-4	2.356562e+0	3.927604e-1
7	205904_at	212556_at	AI469403	SCRIB	0.408034	1.167913e-4	2.699864e+0	3.856948e-1
8	205904_at	227108_at	AB037721	STARD9	0.392531	2.215469e-4	5.121500e+0	6.401875e-1
9	205904_at	206261_at	NM_005674	ZNF239	0.392150	2.249746e-4	5.200737e+0	5.778597e-1
10	205904_at	225480_at	BE408081	C1orf122	0.385277	2.957704e-4	6.837325e+0	6.837325e-1
11	205904_at	226817_at	AU154691	DSC2	0.381472	3.432579e-4	7.935092e+0	7.213720e-1
12	205904_at	1552516_a_at	NM_152696	HIPK1	-0.378489	3.852788e-4	8.906490e+0	7.422075e-1
13	205904_at	50376_at	AI278629	ZNF444	0.377708	3.970405e-4	9.178386e+0	7.060297e-1
14	205904_at	205905_s_at	NM_000247		0.377611	3.985273e-4	9.212755e+0	6.580539e-1
15	205904_at	218978_s_at	NM_018586	SLC25A37	-0.376657	4.133776e-4	9.556051e+0	6.370700e-1
16	205904_at	230757_at	AA195276		0.376063	4.228829e-4	9.775785e+0	6.109865e-1
17	205904_at	202333_s_at	AA877765	UBE2B	-0.373149	4.724774e-4	1.092226e+1	6.424859e-1
18	205904_at	219098_at	NM_014520	MYBBP1A	0.371575	5.014314e-4	1.159159e+1	6.439772e-1
19	205904_at	1569107_s_at	BQ433060	ZNF642	0.371398	5.047833e-4	1.166908e+1	6.141619e-1
20	205904_at	213489_at	BE671156	MAPRE2	0.366946	5.962354e-4	1.378317e+1	6.891587e-1
21	205904_at	222573_s_at	AI679398	SAV1	-0.366620	6.034941e-4	1.395097e+1	6.643321e-1
22	205904_at	209320_at	AF033861	ADCY3	0.366600	6.039405e-4	1.396129e+1	6.346042e-1
23	205904_at	238589_s_at	AW601184		0.366249	6.118634e-4	1.414445e+1	6.149759e-1
24	205904_at	228747_at	AI694646	SEC61A2	0.363633	6.738648e-4	1.557773e+1	6.490722e-1
25	205904_at	229926_at	AI633738		0.361315	7.335273e-4	1.695695e+1	6.782780e-1
26	205904_at	215630_at	AU147528		0.361199	7.366425e-4	1.702896e+1	6.549602e-1
27	205904_at	216942_s_at	D28586	CD58	-0.358420	8.148079e-4	1.883591e+1	6.976264e-1
28	205904_at	229377_at	BF001483	GRTP1	0.357749	8.347744e-4	1.929748e+1	6.891957e-1
29	205904_at	36030_at	AL080214	IFFO1	0.356757	8.651470e-4	1.999960e+1	6.896415e-1
30	205904_at	1562391_at	AK091497	B3GALNT2	0.356412	8.759242e-4	2.024874e+1	6.749580e-1
31	205904_at	213312_at	NM_020425	C6orf162	-0.355482	9.056013e-4	2.093479e+1	6.753157e-1
32	205904_at	230856_at	AI073396		0.354172	9.489858e-4	2.193770e+1	6.855533e-1
33	205904_at	207983_s_at	NM_006603	STAG2	-0.354034	9.536609e-4	2.204578e+1	6.680539e-1
34	205904_at	48117_at	AA160496	CCDC101	-0.351063	1.059581e-3	2.449434e+1	7.204217e-1
35	205904_at	235478_at	T79927	DCLRE1C	0.350165	1.093647e-3	2.528184e+1	7.223384e-1
36	205904_at	212161_at	AA994666	AP2A2	0.349136	1.133859e-3	2.621142e+1	7.280951e-1
37	205904_at	231270_at	BF111998	CA13	0.348802	1.147235e-3	2.652063e+1	7.167737e-1
38	205904_at	49452_at	AI057637	ACACB	0.347091	1.217853e-3	2.815310e+1	7.408710e-1
39	205904_at	40446_at	AL021366	PHF1	0.345071	1.306302e-3	3.019779e+1	7.743024e-1
40	205904_at	226398_s_at	AI804930	FRA10AC1	0.344646	1.325656e-3	3.064518e+1	7.661296e-1
41	205904_at	202697_at	NM_007006	NUDT21	-0.344494	1.332653e-3	3.080695e+1	7.513889e-1
42	205904_at	38398_at	AB002356	MADD	0.344150	1.348575e-3	3.117500e+1	7.422619e-1
43	205904_at	220974_x_at	NM_030971	SFXN3	0.343994	1.355834e-3	3.134282e+1	7.289027e-1
44	205904_at	55081_at	W46406	MICALL1	0.343816	1.364176e-3	3.153565e+1	7.167194e-1
45	205904_at	220957_at	NM_022663	CTAGE1	0.343291	1.389065e-3	3.211102e+1	7.135781e-1
46	205904_at	230620_at	BE550967	USP27X	0.342371	1.433658e-3	3.314187e+1	7.204755e-1
47	205904_at	205584_at	NM_024810	ALG13	0.342167	1.443720e-3	3.337447e+1	7.100952e-1
48	205904_at	36545_s_at	AB011114	SFI1	0.341327	1.485826e-3	3.434783e+1	7.155798e-1
49	205904_at	228512_at	AW138833	PTCD3	0.341009	1.502034e-3	3.472252e+1	7.086229e-1
50	205904_at	219978_s_at	NM_018454	NUSAP1	-0.340996	1.502731e-3	3.473863e+1	6.947725e-1

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation