[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
241	1553992_s_at	BC034248	NBR2		neighbor of BRCA1 gene 2 (non-protein coding)

Fetching correlation data, please wait...
Getting list of correlations for id 241.
Getting list of p-values for id 241.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.110 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	1553992_s_at	202192_s_at	NM_005890	GAS7	0.557971	3.505418e-8	8.103475e-4	8.103475e-4
2	1553992_s_at	229852_at	AW779092	NMNAT1	0.526015	2.769270e-7	6.401722e-3	3.200861e-3
3	1553992_s_at	202461_at	NM_014239	EIF2B2	0.513453	5.897028e-7	1.363216e-2	4.544053e-3
4	1553992_s_at	237340_at	BE551631	SLC26A8	0.512251	6.329158e-7	1.463112e-2	3.657779e-3
5	1553992_s_at	223407_at	AL136786	C16orf48	0.509724	7.337999e-7	1.696325e-2	3.392651e-3
6	1553992_s_at	209688_s_at	BC005078	CCDC93	0.500263	1.263099e-6	2.919907e-2	4.866511e-3
7	1553992_s_at	206583_at	NM_017776	ZNF673	0.497184	1.502060e-6	3.472313e-2	4.960447e-3
8	1553992_s_at	229351_at	AA634138		0.495602	1.640897e-6	3.793262e-2	4.741577e-3
9	1553992_s_at	206090_s_at	NM_018662	DISC1	0.479733	3.887253e-6	8.986164e-2	9.984626e-3
10	1553992_s_at	219067_s_at	NM_017615	NSMCE4A	0.478052	4.248475e-6	9.821199e-2	9.821199e-3
11	1553992_s_at	213596_at	AL050391	CASP4	0.476220	4.677763e-6	1.081359e-1	9.830532e-3
12	1553992_s_at	212733_at	AI798908	KIAA0226	0.474839	5.028279e-6	1.162387e-1	9.686560e-3
13	1553992_s_at	1569073_x_at	BC033232	SMARCA4	-0.470719	6.225836e-6	1.439226e-1	1.107097e-2
14	1553992_s_at	213659_at	AA209420	ZNF75D	0.469313	6.692426e-6	1.547088e-1	1.105063e-2
15	1553992_s_at	218873_at	NM_017710	GON4L	0.467223	7.447240e-6	1.721578e-1	1.147719e-2
16	1553992_s_at	226423_at	AW006774	PAQR8	0.467049	7.513497e-6	1.736895e-1	1.085559e-2
17	1553992_s_at	1556042_s_at	BI912454	LOC338799	0.466266	7.818922e-6	1.807500e-1	1.063235e-2
18	1553992_s_at	225473_at	BE044516	C20orf117	0.466210	7.841063e-6	1.812619e-1	1.007010e-2
19	1553992_s_at	210524_x_at	AF078844		0.464435	8.578731e-6	1.983145e-1	1.043761e-2
20	1553992_s_at	226026_at	AI147467	DIRC2	0.463231	9.115661e-6	2.107267e-1	1.053634e-2
21	1553992_s_at	213028_at	AI887378	NFRKB	0.462269	9.567205e-6	2.211651e-1	1.053167e-2
22	1553992_s_at	212719_at	AB011178	PHLPP1	0.461393	9.995981e-6	2.310771e-1	1.050350e-2
23	1553992_s_at	227847_at	BF432224	EPM2AIP1	0.459415	1.103290e-5	2.550476e-1	1.108903e-2
24	1553992_s_at	228516_at	AI122852	CDAN1	0.458169	1.173629e-5	2.713078e-1	1.130449e-2
25	1553992_s_at	225066_at	AI459157	PPP2R2D	0.457468	1.215034e-5	2.808794e-1	1.123518e-2
26	1553992_s_at	219968_at	NM_016089	ZNF589	0.455412	1.344538e-5	3.108168e-1	1.195449e-2
27	1553992_s_at	203513_at	NM_025137	SPG11	0.454736	1.389889e-5	3.213006e-1	1.190002e-2
28	1553992_s_at	225257_at	AA534536	CCDC97	0.454615	1.398191e-5	3.232197e-1	1.154356e-2
29	1553992_s_at	217978_s_at	NM_017582	UBE2Q1	0.454448	1.409634e-5	3.258652e-1	1.123673e-2
30	1553992_s_at	206296_x_at	NM_007181	MAP4K1	0.454303	1.419681e-5	3.281877e-1	1.093959e-2
31	1553992_s_at	224912_at	AB032966	TTC7A	0.452521	1.548652e-5	3.580020e-1	1.154845e-2
32	1553992_s_at	228159_at	N45312		0.452322	1.563745e-5	3.614910e-1	1.129659e-2
33	1553992_s_at	74694_s_at	AA907940	RABEP2	0.450684	1.693027e-5	3.913770e-1	1.185991e-2
34	1553992_s_at	219627_at	NM_024910	ZNF767	0.449152	1.822911e-5	4.214023e-1	1.239418e-2
35	1553992_s_at	211745_x_at	BC005931		0.449009	1.835549e-5	4.243239e-1	1.212354e-2
36	1553992_s_at	217216_x_at	AC006530	MLH3	0.448065	1.920700e-5	4.440083e-1	1.233356e-2
37	1553992_s_at	210062_s_at	AF114817	ZNF589	0.447203	2.001702e-5	4.627334e-1	1.250631e-2
38	1553992_s_at	223773_s_at	AF277181	SNHG12	0.445356	2.186193e-5	5.053823e-1	1.329953e-2
39	1553992_s_at	225904_at	N64686	C1orf96	0.444858	2.238527e-5	5.174802e-1	1.326872e-2
40	1553992_s_at	209110_s_at	AL050259	RGL2	0.444008	2.330587e-5	5.387619e-1	1.346905e-2
41	1553992_s_at	226869_at	AI655611	MEGF6	0.443963	2.335571e-5	5.399140e-1	1.316863e-2
42	1553992_s_at	212429_s_at	AW194657	GTF3C2	0.443404	2.398215e-5	5.543955e-1	1.319989e-2
43	1553992_s_at	226115_at	AI138934	AHCTF1	0.442049	2.556530e-5	5.909931e-1	1.374403e-2
44	1553992_s_at	229707_at	AI817719	ZNF606	0.441321	2.645681e-5	6.116021e-1	1.390005e-2
45	1553992_s_at	242931_at	AI218358	LONRF3	0.440773	2.714539e-5	6.275199e-1	1.394489e-2
46	1553992_s_at	217896_s_at	NM_024946	FAM192A	0.440042	2.809139e-5	6.493887e-1	1.411714e-2
47	1553992_s_at	202153_s_at	NM_016553	NUP62	0.438665	2.995740e-5	6.925252e-1	1.473458e-2
48	1553992_s_at	48117_at	AA160496	CCDC101	-0.438166	3.066112e-5	7.087931e-1	1.476652e-2
49	1553992_s_at	202963_at	AW027312	RFX5	0.437240	3.200876e-5	7.399466e-1	1.510095e-2
50	1553992_s_at	212051_at	AA676803	WIPF2	0.436880	3.254716e-5	7.523927e-1	1.504785e-2

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation