[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
11526	218256_s_at	NM_017426	NUP54		nucleoporin 54kDa

Fetching correlation data, please wait...
Getting list of correlations for id 11526.
Getting list of p-values for id 11526.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.138 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	218256_s_at	202304_at	NM_014923	FNDC3A	0.714077	2.435574e-14	5.630317e-10	5.630317e-10
2	218256_s_at	202194_at	AL117354	TMED5	0.711763	3.216632e-14	7.435889e-10	3.717944e-10
3	218256_s_at	210621_s_at	M23612	RASA1	0.709849	4.040647e-14	9.340764e-10	3.113588e-10
4	218256_s_at	208773_s_at	AL136943		0.708645	4.659261e-14	1.077081e-9	2.692703e-10
5	218256_s_at	212530_at	AL080111	NEK7	0.707497	5.334166e-14	1.233099e-9	2.466198e-10
6	218256_s_at	225761_at	AI434509	PAPD4	0.703132	8.867727e-14	2.049953e-9	3.416588e-10
7	218256_s_at	222119_s_at	AL117620	FBXO11	0.693740	2.567694e-13	5.935738e-9	8.479625e-10
8	218256_s_at	201018_at	AL079283	EIF1AX	0.689101	4.276981e-13	9.887097e-9	1.235887e-9
9	218256_s_at	230078_at	AI640834	RAPGEF6	0.688188	4.724011e-13	1.092050e-8	1.213389e-9
10	218256_s_at	223007_s_at	AA495988	C9orf5	0.688135	4.751046e-13	1.098299e-8	1.098299e-9
11	218256_s_at	201712_s_at	NM_006267	RANBP2	0.685987	5.992609e-13	1.385311e-8	1.259374e-9
12	218256_s_at	220926_s_at	NM_025191	EDEM3	0.685824	6.098898e-13	1.409882e-8	1.174902e-9
13	218256_s_at	208800_at	AV702627	SRP72	0.682054	9.120889e-13	2.108476e-8	1.621905e-9
14	218256_s_at	225910_at	BF514723	HELZ	0.681064	1.012800e-12	2.341291e-8	1.672350e-9
15	218256_s_at	222531_s_at	AW137526	MUDENG	0.676282	1.669916e-12	3.860345e-8	2.573563e-9
16	218256_s_at	206205_at	NM_022782	MPHOSPH9	0.674383	2.031616e-12	4.696486e-8	2.935304e-9
17	218256_s_at	212754_s_at	AI760249	MON2	0.666477	4.524626e-12	1.045958e-7	6.152692e-9
18	218256_s_at	218185_s_at	NM_018120	ARMC1	0.665865	4.809107e-12	1.111721e-7	6.176229e-9
19	218256_s_at	242277_at	AW880875		0.665124	5.176950e-12	1.196756e-7	6.298714e-9
20	218256_s_at	203689_s_at	AI743037	FMR1	0.663751	5.930152e-12	1.370873e-7	6.854366e-9
21	218256_s_at	201359_at	NM_016451	COPB1	0.660993	7.775056e-12	1.797360e-7	8.558855e-9
22	218256_s_at	227836_at	AI859767	UTP23	0.660000	8.566009e-12	1.980204e-7	9.000928e-9
23	218256_s_at	225928_at	AI984620	VTI1B	0.657336	1.108701e-11	2.562985e-7	1.114341e-8
24	218256_s_at	230659_at	AW139300		0.655684	1.299291e-11	3.003572e-7	1.251488e-8
25	218256_s_at	211929_at	AA527502	HNRNPA3	0.655647	1.303990e-11	3.014433e-7	1.205773e-8
26	218256_s_at	221786_at	BF197222	C6orf120	0.654461	1.460371e-11	3.375940e-7	1.298439e-8
27	218256_s_at	221039_s_at	NM_018482	ASAP1	0.653744	1.563595e-11	3.614562e-7	1.338727e-8
28	218256_s_at	213224_s_at	AK025724	NCRNA00081	0.653382	1.618261e-11	3.740933e-7	1.336048e-8
29	218256_s_at	203100_s_at	NM_004824	CDYL	0.652607	1.741588e-11	4.026030e-7	1.388286e-8
30	218256_s_at	222559_s_at	T79568	RPRD1A	0.652537	1.753225e-11	4.052929e-7	1.350976e-8
31	218256_s_at	226094_at	AI401379	PIK3C2A	0.649744	2.280644e-11	5.272164e-7	1.700698e-8
32	218256_s_at	223085_at	AB029316	RNF19A	0.648758	2.500684e-11	5.780832e-7	1.806510e-8
33	218256_s_at	205062_x_at	NM_002892	ARID4A	0.646542	3.072586e-11	7.102898e-7	2.152393e-8
34	218256_s_at	204313_s_at	AA161486	CREB1	0.646377	3.119978e-11	7.212452e-7	2.121310e-8
35	218256_s_at	225477_s_at	AL138444	NR2C2	0.646364	3.123846e-11	7.221394e-7	2.063255e-8
36	218256_s_at	208775_at	D89729	XPO1	0.645653	3.335751e-11	7.711256e-7	2.142016e-8
37	218256_s_at	202374_s_at	NM_012414	RAB3GAP2	0.643798	3.956203e-11	9.145554e-7	2.471771e-8
38	218256_s_at	203970_s_at	NM_003630	PEX3	0.643577	4.036845e-11	9.331974e-7	2.455783e-8
39	218256_s_at	202798_at	NM_006323	SEC24B	0.640958	5.125036e-11	1.184754e-6	3.037832e-8
40	218256_s_at	209838_at	AA496247	COPS2	0.640522	5.331692e-11	1.232527e-6	3.081318e-8
41	218256_s_at	225132_at	AI983021	FBXL3	0.640225	5.476776e-11	1.266066e-6	3.087967e-8
42	218256_s_at	202396_at	NM_006706	TCERG1	0.639888	5.646455e-11	1.305291e-6	3.107836e-8
43	218256_s_at	226181_at	AI613127	TUBE1	0.639172	6.022815e-11	1.392294e-6	3.237893e-8
44	218256_s_at	205084_at	NM_018844	BCAP29	0.639088	6.068976e-11	1.402965e-6	3.188557e-8
45	218256_s_at	227022_at	AI817388	GNPDA2	0.638939	6.150940e-11	1.421913e-6	3.159806e-8
46	218256_s_at	208796_s_at	BC000196	CCNG1	0.638503	6.396601e-11	1.478702e-6	3.214570e-8
47	218256_s_at	226002_at	AK022142	GAB1	0.637534	6.977731e-11	1.613042e-6	3.432005e-8
48	218256_s_at	218331_s_at	NM_017782	C10orf18	0.637092	7.258965e-11	1.678055e-6	3.495948e-8
49	218256_s_at	206095_s_at	NM_006625	SRSF10	0.634956	8.780760e-11	2.029848e-6	4.142548e-8
50	218256_s_at	204569_at	NM_014920	ICK	0.633574	9.922882e-11	2.293873e-6	4.587745e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation