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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 5 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
1031	1559052_s_at	U25975	PAK2		p21 protein (Cdc42/Rac)-activated kinase 2
6710	208875_s_at	BF796470	PAK2		p21 protein (Cdc42/Rac)-activated kinase 2
6711	208876_s_at	AI076186	PAK2		p21 protein (Cdc42/Rac)-activated kinase 2
6712	208877_at	W74494	PAK2		p21 protein (Cdc42/Rac)-activated kinase 2
6713	208878_s_at	AF092132	PAK2		p21 protein (Cdc42/Rac)-activated kinase 2

Fetching correlation data, please wait...
Getting list of correlations for id 1031.
Getting list of p-values for id 1031.
1 of 5 done.
Getting list of correlations for id 6710.
Getting list of p-values for id 6710.
2 of 5 done.
Getting list of correlations for id 6711.
Getting list of p-values for id 6711.
3 of 5 done.
Getting list of correlations for id 6712.
Getting list of p-values for id 6712.
4 of 5 done.
Getting list of correlations for id 6713.
Getting list of p-values for id 6713.
5 of 5 done.
Calculating corrections for multiple testing (n=115585), please wait...
Done; whole program took 0.400 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208875_s_at	1559052_s_at	U25975	PAK2	0.833391	8.010638e-23	9.259095e-18	9.259095e-18
2	1559052_s_at	208875_s_at	BF796470	PAK2	0.833391	8.010638e-23	9.259095e-18	4.629548e-18
3	208877_at	235542_at	BF675754	TET3	0.764798	2.512869e-17	2.904499e-12	9.681665e-13
4	208877_at	223420_at	AA156470	DNAJC14	0.741240	7.474621e-16	8.639540e-11	2.159885e-11
5	208877_at	222409_at	AL162070	CORO1C	0.738223	1.124143e-15	1.299341e-10	2.598682e-11
6	208877_at	218586_at	NM_018270	C20orf20	0.723892	7.254505e-15	8.385120e-10	1.397520e-10
7	208877_at	212408_at	AK023204	TOR1AIP1	0.721773	9.463636e-15	1.093854e-9	1.562649e-10
8	208877_at	201237_at	AV685920	CAPZA2	0.720868	1.059319e-14	1.224414e-9	1.530518e-10
9	208877_at	225125_at	BF978280	MMGT1	0.718674	1.389993e-14	1.606624e-9	1.785138e-10
10	208877_at	228597_at	AW151538	C21orf45	0.716961	1.715257e-14	1.982579e-9	1.982579e-10
11	208877_at	219166_at	NM_018139	C14orf104	0.716892	1.729841e-14	1.999437e-9	1.817670e-10
12	208877_at	208652_at	BC000400	PPP2CA	0.716668	1.777707e-14	2.054763e-9	1.712303e-10
13	208877_at	226954_at	BE221883	UBE2R2	0.712940	2.793184e-14	3.228502e-9	2.483463e-10
14	208877_at	208931_s_at	AF147209	ILF3	0.711747	3.222667e-14	3.724920e-9	2.660657e-10
15	208877_at	205169_at	NM_005057	RBBP5	0.710656	3.670890e-14	4.242998e-9	2.828665e-10
16	208877_at	200945_s_at	NM_014933	SEC31A	0.710079	3.931563e-14	4.544298e-9	2.840186e-10
17	208877_at	204520_x_at	NM_014577	BRD1	0.708839	4.554007e-14	5.263748e-9	3.096323e-10
18	208877_at	235940_at	AW983691	C9orf64	0.707081	5.601171e-14	6.474113e-9	3.596729e-10
19	208877_at	200947_s_at	NM_005271	GLUD1	0.706242	6.179052e-14	7.142057e-9	3.758977e-10
20	208877_at	224985_at	BE964484	NRAS	0.705314	6.885840e-14	7.958999e-9	3.979499e-10
21	208877_at	219492_at	NM_012110	CHIC2	0.701746	1.040150e-13	1.202257e-8	5.725034e-10
22	208877_at	204618_s_at	NM_005254	GABPB1	0.700321	1.224232e-13	1.415028e-8	6.431946e-10
23	208877_at	225197_at	W58461		0.700095	1.256248e-13	1.452034e-8	6.313192e-10
24	208877_at	201276_at	AF267863	RAB5B	0.699849	1.291882e-13	1.493221e-8	6.221756e-10
25	208877_at	235286_at	BG533580		0.696831	1.817792e-13	2.101094e-8	8.404378e-10
26	1559052_s_at	208351_s_at	NM_002745	MAPK1	0.696571	1.871652e-13	2.163349e-8	8.320573e-10
27	208876_s_at	212770_at	AW873621	TLE3	0.693138	2.744873e-13	3.172661e-8	1.175060e-9
28	208877_at	219675_s_at	NM_025076	UXS1	0.692867	2.828360e-13	3.269160e-8	1.167557e-9
29	208877_at	227335_at	AW664953	DIDO1	0.692093	3.081029e-13	3.561207e-8	1.228003e-9
30	208877_at	202010_s_at	NM_021188	ZNF410	0.692034	3.101001e-13	3.584291e-8	1.194764e-9
31	208877_at	218134_s_at	NM_018047	RBM22	0.691632	3.241461e-13	3.746642e-8	1.208594e-9
32	208877_at	210878_s_at	BC001202	KDM3B	0.691259	3.377408e-13	3.903777e-8	1.219930e-9
33	208877_at	202225_at	AW612311		0.691128	3.426138e-13	3.960101e-8	1.200031e-9
34	208877_at	208910_s_at	L04636	C1QBP	0.689076	4.288760e-13	4.957164e-8	1.457989e-9
35	208877_at	224748_at	AK025925	DCAF7	0.686784	5.499683e-13	6.356808e-8	1.816231e-9
36	208877_at	200639_s_at	NM_003406	YWHAZ	0.685742	6.152629e-13	7.111517e-8	1.975421e-9
37	208877_at	211048_s_at	BC006344	PDIA4	0.685204	6.518957e-13	7.534937e-8	2.036469e-9
38	208877_at	225475_at	AI668786	MIER1	0.683406	7.901019e-13	9.132393e-8	2.403261e-9
39	208875_s_at	1552617_a_at	NM_022457	RFWD2	0.682865	8.368890e-13	9.673181e-8	2.480303e-9
40	208877_at	226008_at	AA627644	NDNL2	0.682262	8.922742e-13	1.031335e-7	2.578338e-9
41	208877_at	200655_s_at	NM_006888	CALM1	0.680261	1.102229e-12	1.274011e-7	3.107345e-9
42	208877_at	225002_s_at	BE349022	SUMF2	0.677201	1.518030e-12	1.754615e-7	4.177655e-9
43	208877_at	223144_s_at	BC000764	AKIRIN2	0.676673	1.603582e-12	1.853500e-7	4.310465e-9
44	208877_at	215460_x_at	AL080149	BRD1	0.675455	1.819179e-12	2.102698e-7	4.778860e-9
45	208877_at	209157_at	AF011793	DNAJA2	0.675069	1.893062e-12	2.188096e-7	4.862436e-9
46	208877_at	217803_at	NM_022130	GOLPH3	0.674819	1.942380e-12	2.245100e-7	4.880651e-9
47	208877_at	213518_at	AI689429	PRKCI	0.673730	2.172475e-12	2.511055e-7	5.342671e-9
48	208877_at	219433_at	NM_017745	BCOR	0.673572	2.208013e-12	2.552132e-7	5.316941e-9
49	208877_at	218564_at	BC002574	RFWD3	0.669572	3.316679e-12	3.833583e-7	7.823639e-9
50	208878_s_at	201297_s_at	AK023321	MOBKL1B	0.667001	4.294012e-12	4.963233e-7	9.926467e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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