[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 7 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4021	203242_s_at	BG054550	PDLIM5		PDZ and LIM domain 5
4022	203243_s_at	NM_006457	PDLIM5		PDZ and LIM domain 5
8174	211681_s_at	AF116705	PDLIM5		PDZ and LIM domain 5
8710	212412_at	AV715767	PDLIM5		PDZ and LIM domain 5
9666	213684_s_at	BF671400	PDLIM5		PDZ and LIM domain 5
10804	216804_s_at	AK027217	PDLIM5		PDZ and LIM domain 5
13397	221994_at	AA196325	PDLIM5		PDZ and LIM domain 5

Fetching correlation data, please wait...
Getting list of correlations for id 4021.
Getting list of p-values for id 4021.
1 of 7 done.
Getting list of correlations for id 4022.
Getting list of p-values for id 4022.
2 of 7 done.
Getting list of correlations for id 8174.
Getting list of p-values for id 8174.
3 of 7 done.
Getting list of correlations for id 8710.
Getting list of p-values for id 8710.
4 of 7 done.
Getting list of correlations for id 9666.
Getting list of p-values for id 9666.
5 of 7 done.
Getting list of correlations for id 10804.
Getting list of p-values for id 10804.
6 of 7 done.
Getting list of correlations for id 13397.
Getting list of p-values for id 13397.
7 of 7 done.
Calculating corrections for multiple testing (n=161819), please wait...
Done; whole program took 0.706 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	221994_at	203863_at	W63731	ACTN2	0.982881	5.155796e-62	8.343058e-57	8.343058e-57
2	221994_at	205374_at	NM_003063	SLN	0.980572	8.837206e-60	1.430028e-54	7.150139e-55
3	221994_at	214365_at	X04201	TPM3	0.979727	4.973366e-59	8.047851e-54	2.682617e-54
4	221994_at	238079_at	AV713323	TPM3	0.978942	2.326271e-58	3.764349e-53	9.410873e-54
5	221994_at	219772_s_at	NM_014332	SMPX	0.977617	2.763384e-57	4.471680e-52	8.943359e-53
6	221994_at	212654_at	AL566786	TPM2	0.977051	7.617350e-57	1.232632e-51	2.054387e-52
7	221994_at	204540_at	NM_001958	EEF1A2	0.976300	2.809576e-56	4.546427e-51	6.494896e-52
8	221994_at	225894_at	AL589603	SYNPO2	0.974965	2.585700e-55	4.184154e-50	5.230192e-51
9	221994_at	235004_at	AI677701	RBM24	0.974678	4.102451e-55	6.638545e-50	7.376161e-51
10	221994_at	228621_at	AA948096	HFE2	0.974531	5.189667e-55	8.397867e-50	8.397867e-51
11	221994_at	203861_s_at	AU146889	ACTN2	0.974280	7.715990e-55	1.248594e-49	1.135085e-50
12	221994_at	219728_at	NM_006790	MYOT	0.973658	2.031800e-54	3.287839e-49	2.739865e-50
13	221994_at	209621_s_at	AF002280	PDLIM3	0.972814	7.278126e-54	1.177739e-48	9.059531e-50
14	221994_at	244839_at	AW975934	TTN	0.972785	7.600477e-54	1.229902e-48	8.785012e-50
15	221994_at	219645_at	NM_001231	CASQ1	0.971977	2.483548e-53	4.018853e-48	2.679235e-49
16	221994_at	219106_s_at	NM_006063	KBTBD10	0.971845	2.999931e-53	4.854459e-48	3.034037e-49
17	221994_at	226864_at	BF245954	PKIA	0.971606	4.227411e-53	6.840754e-48	4.023973e-49
18	221994_at	223762_at	AF177173	TMOD4	0.971540	4.638115e-53	7.505351e-48	4.169639e-49
19	221994_at	219509_at	NM_021245	MYOZ1	0.971240	7.086790e-53	1.146777e-47	6.035670e-49
20	221994_at	213201_s_at	AJ011712	TNNT1	0.971124	8.342051e-53	1.349902e-47	6.749512e-49
21	221994_at	205577_at	NM_005609	PYGM	0.970609	1.704845e-52	2.758763e-47	1.313697e-48
22	221994_at	206353_at	NM_005205	COX6A2	0.970563	1.816688e-52	2.939747e-47	1.336249e-48
23	221994_at	233520_s_at	AL359338	CMYA5	0.969959	4.127082e-52	6.678403e-47	2.903653e-48
24	221994_at	239057_at	BF438844	LMOD2	0.969909	4.415511e-52	7.145136e-47	2.977140e-48
25	213684_s_at	226864_at	BF245954	PKIA	0.969888	4.543203e-52	7.351765e-47	2.940706e-48
26	213684_s_at	204940_at	NM_002667	PLN	0.969503	7.590447e-52	1.228278e-46	4.724148e-48
27	221994_at	229052_at	AI637712		0.969476	7.861664e-52	1.272167e-46	4.711728e-48
28	213684_s_at	205356_at	NM_003940	USP13	0.968916	1.637386e-51	2.649602e-46	9.462865e-48
29	221994_at	236972_at	AI351421	TRIM63	0.968727	2.093218e-51	3.387225e-46	1.168009e-47
30	221994_at	203862_s_at	H16245	ACTN2	0.967604	8.699471e-51	1.407740e-45	4.692465e-47
31	221994_at	212390_at	AB007923	PDE4DIP	0.967522	9.632285e-51	1.558687e-45	5.028022e-47
32	221994_at	202222_s_at	NM_001927	DES	0.967433	1.074815e-50	1.739255e-45	5.435173e-47
33	213684_s_at	204939_s_at	NM_002667	PLN	0.967279	1.301476e-50	2.106035e-45	6.381924e-47
34	213684_s_at	204570_at	NM_001864	COX7A1	0.965991	6.175575e-50	9.993254e-45	2.939192e-46
35	213684_s_at	239398_at	AI743156	KLHL31	0.965529	1.063622e-49	1.721143e-44	4.917550e-46
36	221994_at	205054_at	NM_004543	NEB	0.965507	1.091901e-49	1.766903e-44	4.908064e-46
37	221994_at	212554_at	N90755	CAP2	0.964867	2.291229e-49	3.707644e-44	1.002066e-45
38	221994_at	228406_at	BF060984	SMYD1	0.964759	2.591739e-49	4.193927e-44	1.103665e-45
39	213684_s_at	201540_at	NM_001449	FHL1	0.964536	3.340974e-49	5.406331e-44	1.386239e-45
40	221994_at	205295_at	NM_001825	CKMT2	0.964439	3.731115e-49	6.037653e-44	1.509413e-45
41	221994_at	205589_at	NM_000258	MYL3	0.964405	3.877831e-49	6.275067e-44	1.530504e-45
42	213684_s_at	212390_at	AB007923	PDE4DIP	0.964278	4.474795e-49	7.241069e-44	1.724064e-45
43	221994_at	235617_x_at	AI378282		0.963888	6.928414e-49	1.121149e-43	2.607323e-45
44	213684_s_at	224663_s_at	BF576053	CFL2	0.963493	1.074474e-48	1.738702e-43	3.951597e-45
45	221994_at	214027_x_at	AA889653		0.963143	1.578042e-48	2.553571e-43	5.674603e-45
46	213684_s_at	221994_at	AA196325	PDLIM5	0.963102	1.650549e-48	2.670902e-43	5.806308e-45
47	221994_at	213684_s_at	BF671400	PDLIM5	0.963102	1.650549e-48	2.670902e-43	5.682769e-45
48	221994_at	208195_at	NM_003319	TTN	0.963043	1.758381e-48	2.845394e-43	5.927905e-45
49	221994_at	204483_at	NM_001976	ENO3	0.962890	2.077720e-48	3.362146e-43	6.861523e-45
50	213684_s_at	238079_at	AV713323	TPM3	0.962756	2.401481e-48	3.886053e-43	7.772106e-45

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation