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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
536	1555778_a_at	AY140646	POSTN		periostin, osteoblast specific factor
7878	210809_s_at	D13665	POSTN		periostin, osteoblast specific factor

Fetching correlation data, please wait...
Getting list of correlations for id 536.
Getting list of p-values for id 536.
1 of 2 done.
Getting list of correlations for id 7878.
Getting list of p-values for id 7878.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.192 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	210809_s_at	1555778_a_at	AY140646	POSTN	0.912211	1.609370e-33	7.440761e-29	7.440761e-29
2	1555778_a_at	210809_s_at	D13665	POSTN	0.912211	1.609370e-33	7.440761e-29	3.720381e-29
3	210809_s_at	211161_s_at	AF130082	COL3A1	0.791314	3.323272e-19	1.536481e-14	5.121605e-15
4	1555778_a_at	201852_x_at	AI813758	COL3A1	0.785268	9.399830e-19	4.345917e-14	1.086479e-14
5	1555778_a_at	215076_s_at	AU144167	COL3A1	0.763577	3.024723e-17	1.398451e-12	2.796901e-13
6	210809_s_at	215076_s_at	AU144167	COL3A1	0.758890	6.101311e-17	2.820880e-12	4.701467e-13
7	1555778_a_at	201438_at	NM_004369	COL6A3	0.758154	6.802346e-17	3.144997e-12	4.492852e-13
8	210809_s_at	201852_x_at	AI813758	COL3A1	0.753854	1.274051e-16	5.890448e-12	7.363060e-13
9	1555778_a_at	200907_s_at	AU157932	PALLD	0.749071	2.522877e-16	1.166427e-11	1.296030e-12
10	210809_s_at	211071_s_at	BC006471	MLLT11	0.748958	2.563444e-16	1.185183e-11	1.185183e-12
11	210809_s_at	201438_at	NM_004369	COL6A3	0.748809	2.618074e-16	1.210440e-11	1.100400e-12
12	210809_s_at	200907_s_at	AU157932	PALLD	0.747892	2.978849e-16	1.377241e-11	1.147701e-12
13	210809_s_at	218820_at	NM_020215	C14orf132	0.746478	3.630563e-16	1.678554e-11	1.291196e-12
14	1555778_a_at	211161_s_at	AF130082	COL3A1	0.745719	4.035539e-16	1.865791e-11	1.332708e-12
15	210809_s_at	223235_s_at	AB014737	SMOC2	0.742329	6.442126e-16	2.978452e-11	1.985635e-12
16	1555778_a_at	205991_s_at	NM_006902	PRRX1	0.737890	1.175602e-15	5.435277e-11	3.397048e-12
17	210809_s_at	44783_s_at	R61374	HEY1	0.730463	3.131370e-15	1.447758e-10	8.516222e-12
18	210809_s_at	203700_s_at	NM_013989	DIO2	0.726254	5.378114e-15	2.486517e-10	1.381398e-11
19	1555778_a_at	224928_at	AK024846	SETD7	0.724185	6.991484e-15	3.232443e-10	1.701286e-11
20	1555778_a_at	223235_s_at	AB014737	SMOC2	0.720418	1.120288e-14	5.179540e-10	2.589770e-11
21	1555778_a_at	209200_at	AL536517	MEF2C	0.719251	1.294487e-14	5.984931e-10	2.849967e-11
22	1555778_a_at	224895_at	AA557632	YAP1	0.715099	2.151983e-14	9.949477e-10	4.522489e-11
23	210809_s_at	200897_s_at	NM_016081	PALLD	0.714857	2.216011e-14	1.024550e-9	4.454567e-11
24	210809_s_at	204517_at	BE962749	PPIC	0.714749	2.245177e-14	1.038035e-9	4.325147e-11
25	1555778_a_at	212325_at	AK027231	LIMCH1	0.713681	2.554641e-14	1.181113e-9	4.724451e-11
26	1555778_a_at	1554966_a_at	AF329092	FILIP1L	0.712374	2.989742e-14	1.382277e-9	5.316451e-11
27	1555778_a_at	204992_s_at	NM_002628	PFN2	0.711561	3.295262e-14	1.523531e-9	5.642709e-11
28	1555778_a_at	1554089_s_at	BC010183		0.710961	3.540057e-14	1.636710e-9	5.845393e-11
29	210809_s_at	204992_s_at	NM_002628	PFN2	0.710619	3.687246e-14	1.704761e-9	5.878488e-11
30	1555778_a_at	219087_at	NM_017680	ASPN	0.710126	3.910002e-14	1.807750e-9	6.025834e-11
31	1555778_a_at	200897_s_at	NM_016081	PALLD	0.710106	3.919298e-14	1.812048e-9	5.845318e-11
32	210809_s_at	226930_at	AI345957	FNDC1	0.708803	4.573262e-14	2.114402e-9	6.607506e-11
33	210809_s_at	211980_at	AI922605	COL4A1	0.708335	4.833158e-14	2.234562e-9	6.771401e-11
34	1555778_a_at	225019_at	BF797381	CAMK2D	0.704326	7.723831e-14	3.571036e-9	1.050305e-10
35	210809_s_at	225721_at	AI658662	SYNPO2	0.703331	8.666095e-14	4.006682e-9	1.144766e-10
36	1555778_a_at	204688_at	NM_003919	SGCE	0.702487	9.552272e-14	4.416397e-9	1.226777e-10
37	210809_s_at	1556097_at	CA442342		0.701509	1.068760e-13	4.941305e-9	1.335488e-10
38	1555778_a_at	225278_at	BF593382	PRKAB2	0.701426	1.078907e-13	4.988219e-9	1.312689e-10
39	1555778_a_at	1556097_at	CA442342		0.701260	1.099668e-13	5.084205e-9	1.303642e-10
40	210809_s_at	203477_at	NM_001855	COL15A1	0.701202	1.106955e-13	5.117897e-9	1.279474e-10
41	1555778_a_at	222433_at	AK025108	ENAH	0.698715	1.469466e-13	6.793930e-9	1.657056e-10
42	210809_s_at	202598_at	NM_005979	S100A13	0.697197	1.744311e-13	8.064645e-9	1.920154e-10
43	210809_s_at	204688_at	NM_003919	SGCE	0.696750	1.834419e-13	8.481252e-9	1.972384e-10
44	1555778_a_at	215034_s_at	AI189753	TM4SF1	0.696120	1.968701e-13	9.102093e-9	2.068657e-10
45	1555778_a_at	204776_at	NM_003248	THBS4	0.695623	2.081485e-13	9.623536e-9	2.138564e-10
46	210809_s_at	204547_at	NM_006822	RAB40B	0.694397	2.386730e-13	1.103481e-8	2.398871e-10
47	210809_s_at	219087_at	NM_017680	ASPN	0.693754	2.563638e-13	1.185272e-8	2.521856e-10
48	210809_s_at	213428_s_at	AA292373	COL6A1	0.693612	2.604448e-13	1.204140e-8	2.508626e-10
49	210809_s_at	226145_s_at	AL157471	FRAS1	0.693484	2.641688e-13	1.221358e-8	2.492567e-10
50	1555778_a_at	202566_s_at	AF051851	SVIL	0.692732	2.871002e-13	1.327379e-8	2.654758e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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