[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
374	1554614_a_at	AB051233	PTBP2		polypyrimidine tract binding protein 2
11882	218683_at	NM_021190	PTBP2		polypyrimidine tract binding protein 2

Fetching correlation data, please wait...
Getting list of correlations for id 374.
Getting list of p-values for id 374.
1 of 2 done.
Getting list of correlations for id 11882.
Getting list of p-values for id 11882.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.231 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	1554614_a_at	207563_s_at	U77413	OGT	0.816339	3.027051e-21	1.399527e-16	1.399527e-16
2	1554614_a_at	208867_s_at	AF119911	CSNK1A1	0.812792	6.146766e-21	2.841896e-16	1.420948e-16
3	1554614_a_at	207564_x_at	NM_003605	OGT	0.810270	1.008095e-20	4.660827e-16	1.553609e-16
4	1554614_a_at	222502_s_at	BC005193	UFM1	0.805022	2.756456e-20	1.274420e-15	3.186050e-16
5	1554614_a_at	200604_s_at	M18468	PRKAR1A	0.801020	5.816270e-20	2.689094e-15	5.378189e-16
6	1554614_a_at	202162_s_at	AI769416	CNOT8	0.800618	6.263532e-20	2.895881e-15	4.826469e-16
7	218683_at	226641_at	AU157224		0.792316	2.788155e-19	1.289075e-14	1.841536e-15
8	1554614_a_at	201742_x_at	NM_006924	SRSF1	0.789012	4.957205e-19	2.291914e-14	2.864893e-15
9	1554614_a_at	222719_s_at	AB033831	PDGFC	0.788900	5.054507e-19	2.336901e-14	2.596556e-15
10	1554614_a_at	222846_at	AB038995	RAB8B	0.788459	5.452977e-19	2.521129e-14	2.521129e-15
11	218683_at	226366_at	AI828221	SHPRH	0.787660	6.255063e-19	2.891966e-14	2.629060e-15
12	1554614_a_at	1555996_s_at	AI332397	EIF4A2	0.787146	6.830078e-19	3.157818e-14	2.631515e-15
13	218683_at	227268_at	N51514	RNFT1	0.784584	1.055197e-18	4.878598e-14	3.752768e-15
14	218683_at	234997_x_at	AA343057		0.784563	1.058823e-18	4.895360e-14	3.496686e-15
15	1554614_a_at	214895_s_at	AU135154	ADAM10	0.784156	1.133983e-18	5.242855e-14	3.495237e-15
16	218683_at	218090_s_at	NM_018117	WDR11	0.783821	1.199603e-18	5.546243e-14	3.466402e-15
17	1554614_a_at	200641_s_at	U28964	YWHAZ	0.782165	1.582274e-18	7.315486e-14	4.303227e-15
18	218683_at	201448_at	AL046419	TIA1	0.782135	1.590166e-18	7.351973e-14	4.084429e-15
19	1554614_a_at	212514_x_at	R60068	DDX3X	0.781204	1.855907e-18	8.580600e-14	4.516105e-15
20	1554614_a_at	221428_s_at	NM_030921	TBL1XR1	0.776265	4.161794e-18	1.924164e-13	9.620820e-15
21	1554614_a_at	1552660_a_at	BC021215	C5orf22	0.776175	4.222530e-18	1.952245e-13	9.296403e-15
22	1554614_a_at	202164_s_at	AF180476	CNOT8	0.773659	6.320278e-18	2.922118e-13	1.328235e-14
23	1554614_a_at	209754_s_at	AF113682	TMPO	0.772430	7.681990e-18	3.551691e-13	1.544214e-14
24	1554614_a_at	200769_s_at	NM_005911	MAT2A	0.770399	1.057711e-17	4.890221e-13	2.037592e-14
25	1554614_a_at	208097_s_at	NM_030755	TMX1	0.770334	1.068520e-17	4.940196e-13	1.976078e-14
26	1554614_a_at	205884_at	NM_000885	ITGA4	0.769271	1.261558e-17	5.832685e-13	2.243340e-14
27	1554614_a_at	204427_s_at	NM_006815	TMED2	0.766664	1.888459e-17	8.731103e-13	3.233742e-14
28	1554614_a_at	204426_at	NM_006815	TMED2	0.764233	2.738156e-17	1.265959e-12	4.521282e-14
29	218683_at	204407_at	AF080255	TTF2	0.763379	3.116871e-17	1.441054e-12	4.969153e-14
30	1554614_a_at	201992_s_at	NM_004521	KIF5B	0.763173	3.215431e-17	1.486622e-12	4.955408e-14
31	218683_at	221763_at	AI694023	JMJD1C	0.762094	3.783413e-17	1.749223e-12	5.642656e-14
32	1554614_a_at	1554868_s_at	BC013916	PCNP	0.761529	4.118340e-17	1.904073e-12	5.950229e-14
33	1554614_a_at	213548_s_at	BG257762	CDV3	0.760615	4.721611e-17	2.182990e-12	6.615120e-14
34	1554614_a_at	213584_s_at	AI432137	CREBZF	0.759913	5.242315e-17	2.423732e-12	7.128624e-14
35	218683_at	208882_s_at	U69567	UBR5	0.759632	5.465248e-17	2.526803e-12	7.219437e-14
36	1554614_a_at	210786_s_at	M93255	FLI1	0.759468	5.599963e-17	2.589087e-12	7.191908e-14
37	218683_at	213883_s_at	AA012917	TM2D1	0.759261	5.774556e-17	2.669808e-12	7.215697e-14
38	218683_at	222553_x_at	AL541048	OXR1	0.758677	6.296517e-17	2.911132e-12	7.660873e-14
39	1554614_a_at	208884_s_at	AF006010	UBR5	0.758404	6.555482e-17	3.030862e-12	7.771440e-14
40	218683_at	209028_s_at	AF006516	ABI1	0.758392	6.566805e-17	3.036097e-12	7.590242e-14
41	218683_at	218649_x_at	NM_004713	SDCCAG1	0.757762	7.206412e-17	3.331813e-12	8.126372e-14
42	1554614_a_at	210543_s_at	U34994	PRKDC	0.756785	8.318018e-17	3.845752e-12	9.156553e-14
43	1554614_a_at	217301_x_at	X71810	RBBP4	0.755242	1.041864e-16	4.816953e-12	1.120222e-13
44	1554614_a_at	220735_s_at	NM_020654	SENP7	0.755042	1.072630e-16	4.959196e-12	1.127090e-13
45	1554614_a_at	1554930_a_at	AB049740	FUT8	0.753270	1.386217e-16	6.409036e-12	1.424230e-13
46	218683_at	216713_at	AL049325	KRIT1	0.753075	1.425563e-16	6.590947e-12	1.432815e-13
47	1554614_a_at	206959_s_at	NM_023011	UPF3A	0.752878	1.466613e-16	6.780738e-12	1.442710e-13
48	1554614_a_at	202316_x_at	AW241715	UBE4B	0.751821	1.706573e-16	7.890171e-12	1.643786e-13
49	1554614_a_at	208852_s_at	AI761759	CANX	0.751483	1.791051e-16	8.280745e-12	1.689948e-13
50	1554614_a_at	203372_s_at	AB004903	SOCS2	0.751109	1.889369e-16	8.735307e-12	1.747061e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation