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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
411	1554860_at	AF394064	PTPN7		protein tyrosine phosphatase, non-receptor type 7
5163	204852_s_at	NM_002832	PTPN7		protein tyrosine phosphatase, non-receptor type 7

Fetching correlation data, please wait...
Getting list of correlations for id 411.
Getting list of p-values for id 411.
1 of 2 done.
Getting list of correlations for id 5163.
Getting list of p-values for id 5163.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.233 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	1554860_at	210528_at	AF010447	MR1	0.747174	3.294246e-16	1.523062e-11	1.523062e-11
2	1554860_at	242797_x_at	AA629668		0.732137	2.517828e-15	1.164093e-10	5.820464e-11
3	1554860_at	234156_at	AK026905		0.729207	3.683584e-15	1.703068e-10	5.676894e-11
4	1554860_at	244842_x_at	AA235663		0.727123	4.814085e-15	2.225744e-10	5.564360e-11
5	1554860_at	233193_x_at	AK000455	INTS4	0.722010	9.188023e-15	4.247991e-10	8.495981e-11
6	1554860_at	207365_x_at	NM_014709	USP34	0.718525	1.415741e-14	6.545536e-10	1.090923e-10
7	1554860_at	231812_x_at	AK023255	PHAX	0.717774	1.552609e-14	7.178330e-10	1.025476e-10
8	1554860_at	206565_x_at	NM_006780	SMA4	0.714890	2.207225e-14	1.020488e-9	1.275610e-10
9	1554860_at	1570210_x_at	BC022346	PPP6R2	0.712664	2.887463e-14	1.334990e-9	1.483322e-10
10	1554860_at	232169_x_at	AK002110	NDUFS8	0.712233	3.040696e-14	1.405835e-9	1.405835e-10
11	1554860_at	1557751_at	AI537913		0.710365	3.800542e-14	1.757142e-9	1.597402e-10
12	1554860_at	220352_x_at	NM_024305	FLJ42627	0.708818	4.565445e-14	2.110788e-9	1.758990e-10
13	1554860_at	233702_x_at	AK024599		0.707799	5.148023e-14	2.380137e-9	1.830875e-10
14	1554860_at	223647_x_at	BC000004	HSCB	0.707714	5.200092e-14	2.404210e-9	1.717293e-10
15	1554860_at	242398_x_at	AA605121		0.706259	6.167391e-14	2.851431e-9	1.900954e-10
16	1554860_at	207499_x_at	NM_017979	UNC45A	0.705189	6.987007e-14	3.230373e-9	2.018983e-10
17	1554860_at	219290_x_at	NM_014395	DAPP1	0.703121	8.878589e-14	4.104927e-9	2.414663e-10
18	1554860_at	242364_x_at	AI809752	LOC100131096	0.701382	1.084395e-13	5.013591e-9	2.785328e-10
19	1554860_at	208246_x_at	NM_017618		0.701100	1.119948e-13	5.177969e-9	2.725247e-10
20	1554860_at	233473_x_at	AU156202		0.698660	1.478656e-13	6.836418e-9	3.418209e-10
21	1554860_at	231992_x_at	AK024371	LOC493754	0.698484	1.508445e-13	6.974145e-9	3.321021e-10
22	1554860_at	232168_x_at	AK023821	MACF1	0.698147	1.567064e-13	7.245164e-9	3.293256e-10
23	1554860_at	231696_x_at	AV648424		0.697918	1.608202e-13	7.435359e-9	3.232765e-10
24	1554860_at	209584_x_at	AF165520	APOBEC3C	0.696715	1.841529e-13	8.514125e-9	3.547552e-10
25	1554860_at	233041_x_at	AK025009		0.696698	1.845047e-13	8.530389e-9	3.412156e-10
26	1554860_at	208137_x_at	NM_030972	ZNF611	0.694302	2.411987e-13	1.115158e-8	4.289070e-10
27	1554860_at	234423_x_at	AK024210		0.693834	2.541018e-13	1.174814e-8	4.351164e-10
28	1554860_at	222104_x_at	AI569458	GTF2H3	0.693556	2.620513e-13	1.211568e-8	4.327029e-10
29	1554860_at	208301_at	NM_025033		0.693025	2.779464e-13	1.285057e-8	4.431232e-10
30	1554860_at	207598_x_at	NM_005431	XRCC2	0.692995	2.788808e-13	1.289377e-8	4.297925e-10
31	1554860_at	208238_x_at	NM_013344		0.692871	2.827294e-13	1.307171e-8	4.216680e-10
32	1554860_at	220242_x_at	NM_018260	ZNF701	0.691400	3.325256e-13	1.537399e-8	4.804372e-10
33	1554860_at	203943_at	NM_004798	KIF3B	0.690608	3.627453e-13	1.677117e-8	5.082171e-10
34	1554860_at	220252_x_at	NM_025159	CXorf21	0.690469	3.683101e-13	1.702845e-8	5.008367e-10
35	1554860_at	241727_x_at	AA578546	DHFRL1	0.688935	4.355126e-13	2.013549e-8	5.752997e-10
36	1554860_at	243147_x_at	AW118707		0.688782	4.428598e-13	2.047518e-8	5.687550e-10
37	1554860_at	208884_s_at	AF006010	UBR5	-0.688588	4.523034e-13	2.091180e-8	5.651837e-10
38	1554860_at	239333_x_at	BF525633		0.688345	4.644038e-13	2.147124e-8	5.650327e-10
39	1554860_at	223697_x_at	BC004407	C9orf64	0.688104	4.767044e-13	2.203995e-8	5.651270e-10
40	1554860_at	232266_x_at	AK024379	CDK13	0.687583	5.044028e-13	2.332056e-8	5.830140e-10
41	204852_s_at	210981_s_at	AF040751	GRK6	0.686339	5.769653e-13	2.667541e-8	6.506198e-10
42	1554860_at	235084_x_at	AI809831		0.686035	5.962215e-13	2.756570e-8	6.563263e-10
43	1554860_at	217662_x_at	AI393960		0.685302	6.450642e-13	2.982390e-8	6.935790e-10
44	1554860_at	243801_x_at	AA971709		0.685275	6.469318e-13	2.991025e-8	6.797783e-10
45	1554860_at	217703_x_at	AA401963		0.685112	6.583327e-13	3.043736e-8	6.763857e-10
46	1554860_at	214715_x_at	AK024789	ZNF160	0.684754	6.840844e-13	3.162796e-8	6.875643e-10
47	1554860_at	235035_at	BF342223	SLC35E1	0.684752	6.842652e-13	3.163632e-8	6.731131e-10
48	1554860_at	236715_x_at	BF056139	UACA	0.684015	7.403653e-13	3.423005e-8	7.131260e-10
49	1554860_at	215179_x_at	AK023843	PGF	0.683294	7.995321e-13	3.696557e-8	7.543993e-10
50	1554860_at	232215_x_at	AK000296	PRR11	0.683085	8.175593e-13	3.779904e-8	7.559807e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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