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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
1964	200863_s_at	AI215102	RAB11A		RAB11A, member RAS oncogene family
1965	200864_s_at	NM_004663	RAB11A		RAB11A, member RAS oncogene family

Fetching correlation data, please wait...
Getting list of correlations for id 1964.
Getting list of p-values for id 1964.
1 of 2 done.
Getting list of correlations for id 1965.
Getting list of p-values for id 1965.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.203 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	200864_s_at	217954_s_at	NM_015153	PHF3	0.747890	2.979744e-16	1.377655e-11	1.377655e-11
2	200864_s_at	244650_at	AA581439	FAM105A	0.731703	2.664584e-15	1.231944e-10	6.159719e-11
3	200864_s_at	223236_at	AL136806	CCDC55	0.731106	2.880330e-15	1.331692e-10	4.438972e-11
4	200864_s_at	226952_at	AU149385	EAF1	0.716614	1.789664e-14	8.274332e-10	2.068583e-10
5	200864_s_at	209628_at	AK023289	NXT2	0.712687	2.879252e-14	1.331193e-9	2.662387e-10
6	200864_s_at	201634_s_at	NM_030579	CYB5B	0.712456	2.960276e-14	1.368654e-9	2.281090e-10
7	200864_s_at	233970_s_at	AB032979	TRMT6	0.711044	3.505282e-14	1.620632e-9	2.315189e-10
8	200863_s_at	200712_s_at	AI633566	MAPRE1	0.709680	4.122203e-14	1.905859e-9	2.382324e-10
9	200863_s_at	208517_x_at	NM_001207	BTF3	0.705195	6.981800e-14	3.227965e-9	3.586628e-10
10	200864_s_at	202872_at	AW024925	ATP6V1C1	0.704801	7.309734e-14	3.379583e-9	3.379583e-10
11	200864_s_at	226588_at	AB046824	CWC22	0.704268	7.776009e-14	3.595160e-9	3.268327e-10
12	200863_s_at	218467_at	NM_020232	PSMG2	0.702676	9.346563e-14	4.321290e-9	3.601075e-10
13	200864_s_at	229594_at	AI890299	SPTY2D1	0.701900	1.021884e-13	4.724581e-9	3.634293e-10
14	200864_s_at	222603_at	AL136980	ERMP1	0.700804	1.158605e-13	5.356695e-9	3.826210e-10
15	200864_s_at	221480_at	BG180941	HNRNPD	0.695952	2.006166e-13	9.275307e-9	6.183538e-10
16	200864_s_at	218668_s_at	NM_021183	RAP2C	0.694558	2.344220e-13	1.083827e-8	6.773917e-10
17	200863_s_at	1557915_s_at	U56250	GSTO1	0.692994	2.788956e-13	1.289446e-8	7.584975e-10
18	200864_s_at	228597_at	AW151538	C21orf45	0.692293	3.013614e-13	1.393314e-8	7.740634e-10
19	200864_s_at	221931_s_at	AV701173	SEH1L	0.691867	3.158561e-13	1.460329e-8	7.685943e-10
20	200864_s_at	210260_s_at	BC005352	TNFAIP8	0.691130	3.425452e-13	1.583724e-8	7.918618e-10
21	200864_s_at	227551_at	BE856596	FAM108B1	0.690111	3.830552e-13	1.771017e-8	8.433416e-10
22	200864_s_at	218395_at	NM_022496	ACTR6	0.688670	4.482621e-13	2.072495e-8	9.420432e-10
23	200864_s_at	200073_s_at	M94630	HNRNPD	0.688244	4.694930e-13	2.170654e-8	9.437627e-10
24	200864_s_at	225256_at	AI457965		0.687777	4.938920e-13	2.283460e-8	9.514418e-10
25	200864_s_at	221568_s_at	AF090900	LIN7C	0.687655	5.004769e-13	2.313905e-8	9.255619e-10
26	200864_s_at	214113_s_at	AI738479	RBM8A	0.682369	8.822029e-13	4.078777e-8	1.568760e-9
27	200864_s_at	201132_at	NM_019597	HNRNPH2	0.678612	1.310417e-12	6.058582e-8	2.243919e-9
28	200864_s_at	1552426_a_at	NM_078474	TM2D3	0.678593	1.313064e-12	6.070821e-8	2.168150e-9
29	200864_s_at	227065_at	AA523105	RNF216	0.676613	1.613637e-12	7.460490e-8	2.572583e-9
30	200864_s_at	236283_x_at	AA287921	LOC646214	0.673999	2.113370e-12	9.770953e-8	3.256984e-9
31	200864_s_at	225583_at	AL573637	UXS1	0.673598	2.202109e-12	1.018123e-7	3.284268e-9
32	200863_s_at	217356_s_at	S81916	PGK1	0.673193	2.295424e-12	1.061266e-7	3.316457e-9
33	200864_s_at	209206_at	AV701283	SEC22B	0.673190	2.296201e-12	1.061626e-7	3.217047e-9
34	200864_s_at	227040_at	AI655763	NHLRC3	0.672562	2.448484e-12	1.132032e-7	3.329506e-9
35	200864_s_at	200016_x_at	NM_002136	HNRNPA1	0.672240	2.530128e-12	1.169780e-7	3.342227e-9
36	200863_s_at	217746_s_at	NM_013374	PDCD6IP	0.670866	2.909857e-12	1.345343e-7	3.737064e-9
37	200864_s_at	203739_at	NM_006526	ZNF217	0.667661	4.019747e-12	1.858490e-7	5.022946e-9
38	200863_s_at	211792_s_at	U17074	CDKN2C	0.667584	4.050831e-12	1.872861e-7	4.928583e-9
39	200864_s_at	227908_at	BG236006	TBC1D24	0.666778	4.390954e-12	2.030114e-7	5.205419e-9
40	200864_s_at	216559_x_at	AL050348		0.664829	5.330354e-12	2.464436e-7	6.161090e-9
41	200864_s_at	234998_at	N57510		0.662605	6.639020e-12	3.069485e-7	7.486548e-9
42	200864_s_at	200969_at	BG107676	SERP1	0.662218	6.896077e-12	3.188332e-7	7.591267e-9
43	200864_s_at	225475_at	AI668786	MIER1	0.661864	7.140259e-12	3.301227e-7	7.677273e-9
44	200863_s_at	200803_s_at	AF033095	TMBIM6	0.658718	9.700795e-12	4.485066e-7	1.019333e-8
45	200864_s_at	208289_s_at	NM_004879	EI24	0.657157	1.127946e-11	5.214944e-7	1.158876e-8
46	200864_s_at	201699_at	NM_002806	PSMC6	0.656547	1.196103e-11	5.530062e-7	1.202187e-8
47	200864_s_at	224935_at	BG165815	EIF2S3	0.656534	1.197623e-11	5.537090e-7	1.178104e-8
48	200863_s_at	223273_at	AF277185	C14orf142	0.656522	1.199019e-11	5.543543e-7	1.154905e-8
49	200864_s_at	205664_at	NM_012311	KIN	0.656219	1.234421e-11	5.707221e-7	1.164739e-8
50	200864_s_at	226720_at	AI686303	PWWP2A	0.655243	1.355308e-11	6.266130e-7	1.253226e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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