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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
2221	201140_s_at	NM_004583	RAB5C		RAB5C, member RAS oncogene family
2237	201156_s_at	AF141304	RAB5C		RAB5C, member RAS oncogene family

Fetching correlation data, please wait...
Getting list of correlations for id 2221.
Getting list of p-values for id 2221.
1 of 2 done.
Getting list of correlations for id 2237.
Getting list of p-values for id 2237.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.173 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	201156_s_at	201140_s_at	NM_004583	RAB5C	0.865855	2.193512e-26	1.014148e-21	1.014148e-21
2	201140_s_at	201156_s_at	AF141304	RAB5C	0.865855	2.193512e-26	1.014148e-21	5.070742e-22
3	201156_s_at	215159_s_at	AI239732	NADK	0.787401	6.538997e-19	3.023240e-14	1.007747e-14
4	201156_s_at	208917_x_at	BE674658	NADK	0.764511	2.625099e-17	1.213688e-12	3.034220e-13
5	201156_s_at	213607_x_at	BE551347	NADK	0.762761	3.421478e-17	1.581886e-12	3.163772e-13
6	201140_s_at	234973_at	BG325630	SLC38A5	0.759455	5.611249e-17	2.594305e-12	4.323841e-13
7	201140_s_at	218389_s_at	NM_016022	APH1A	0.752718	1.500766e-16	6.938639e-12	9.912342e-13
8	201156_s_at	201043_s_at	NM_006305	ANP32A	0.712541	2.930141e-14	1.354721e-9	1.693402e-10
9	201140_s_at	201043_s_at	NM_006305	ANP32A	0.710075	3.933591e-14	1.818656e-9	2.020729e-10
10	201156_s_at	211136_s_at	BC004865	CLPTM1	0.697693	1.649468e-13	7.626153e-9	7.626153e-10
11	201140_s_at	213607_x_at	BE551347	NADK	0.694455	2.371381e-13	1.096384e-8	9.967131e-10
12	201156_s_at	210978_s_at	BC002616	TAGLN2	0.694052	2.480220e-13	1.146705e-8	9.555874e-10
13	201140_s_at	202876_s_at	NM_002586	PBX2	0.693391	2.668840e-13	1.233912e-8	9.491627e-10
14	201156_s_at	211622_s_at	M33384	ARF3	0.682371	8.819408e-13	4.077565e-8	2.912547e-9
15	201156_s_at	206665_s_at	NM_001191	BCL2L1	0.680891	1.031431e-12	4.768717e-8	3.179145e-9
16	201156_s_at	1554574_a_at	AF361370	CYB5R3	0.680609	1.062583e-12	4.912747e-8	3.070467e-9
17	201156_s_at	209880_s_at	U02297	SELPLG	0.677705	1.440464e-12	6.659839e-8	3.917553e-9
18	201140_s_at	225119_at	AW299290	CHMP4B	0.677641	1.450182e-12	6.704772e-8	3.724873e-9
19	201156_s_at	201950_x_at	NM_004930	CAPZB	0.676655	1.606659e-12	7.428228e-8	3.909594e-9
20	201140_s_at	215159_s_at	AI239732	NADK	0.670271	3.090418e-12	1.428824e-7	7.144120e-9
21	201140_s_at	203388_at	NM_004313	ARRB2	0.668749	3.603862e-12	1.666210e-7	7.934331e-9
22	201156_s_at	1555730_a_at	D00682	CFL1	0.668346	3.752607e-12	1.734980e-7	7.886274e-9
23	201140_s_at	208917_x_at	BE674658	NADK	0.667326	4.156832e-12	1.921870e-7	8.355956e-9
24	201156_s_at	206491_s_at	NM_003827	NAPA	0.666559	4.488092e-12	2.075025e-7	8.645936e-9
25	201156_s_at	217930_s_at	NM_019009	TOLLIP	0.665343	5.065550e-12	2.342006e-7	9.368025e-9
26	201140_s_at	210886_x_at	AB007457	TP53TG1	0.663831	5.883754e-12	2.720295e-7	1.046267e-8
27	201156_s_at	207824_s_at	NM_002383	MAZ	0.663827	5.885844e-12	2.721261e-7	1.007875e-8
28	201140_s_at	208751_at	BC001165	NAPA	0.658497	9.911000e-12	4.582252e-7	1.636519e-8
29	201140_s_at	207824_s_at	NM_002383	MAZ	0.658427	9.978484e-12	4.613452e-7	1.590846e-8
30	201156_s_at	202198_s_at	AF233438	MTMR3	0.655363	1.339841e-11	6.194619e-7	2.064873e-8
31	201156_s_at	225294_s_at	BG340967	TRAPPC1	0.654451	1.461809e-11	6.758529e-7	2.180171e-8
32	201156_s_at	218813_s_at	NM_020145	SH3GLB2	0.654399	1.469075e-11	6.792121e-7	2.122538e-8
33	201156_s_at	202855_s_at	AL513917	SLC16A3	0.651925	1.857596e-11	8.588409e-7	2.602548e-8
34	201140_s_at	201055_s_at	NM_006805	HNRNPA0	0.650708	2.083293e-11	9.631895e-7	2.832910e-8
35	201140_s_at	201216_at	NM_006817	ERP29	0.650679	2.089098e-11	9.658736e-7	2.759639e-8
36	201156_s_at	202290_at	NM_014891	PDAP1	0.650394	2.145624e-11	9.920080e-7	2.755578e-8
37	201156_s_at	205346_at	NM_006927	ST3GAL2	0.648994	2.446354e-11	1.131047e-6	3.056884e-8
38	201140_s_at	228910_at	AI870617		0.648836	2.482606e-11	1.147808e-6	3.020548e-8
39	201140_s_at	208478_s_at	NM_004324	BAX	0.647990	2.686193e-11	1.241935e-6	3.184448e-8
40	201156_s_at	215037_s_at	U72398	BCL2L1	0.646804	2.998959e-11	1.386539e-6	3.466347e-8
41	201156_s_at	228851_s_at	AV726322	ENSA	0.646599	3.056463e-11	1.413125e-6	3.446646e-8
42	201156_s_at	213554_s_at	AI928407	CDV3	0.644941	3.561800e-11	1.646763e-6	3.920864e-8
43	201140_s_at	202290_at	NM_014891	PDAP1	0.644098	3.848723e-11	1.779419e-6	4.138183e-8
44	201156_s_at	213986_s_at	AI805266	C19orf6	0.639881	5.650025e-11	2.612233e-6	5.936892e-8
45	201156_s_at	218260_at	NM_024050	DDA1	0.638607	6.337082e-11	2.929887e-6	6.510859e-8
46	201140_s_at	202855_s_at	AL513917	SLC16A3	0.636311	7.783335e-11	3.598547e-6	7.822929e-8
47	201156_s_at	213490_s_at	AI762811	MAP2K2	0.635859	8.103687e-11	3.746659e-6	7.971614e-8
48	201156_s_at	211102_s_at	U82277	LILRA2	0.633175	1.027816e-10	4.752003e-6	9.900006e-8
49	201140_s_at	222165_x_at	AK022885	C9orf16	0.632233	1.116675e-10	5.162836e-6	1.053640e-7
50	201156_s_at	208677_s_at	AL550657	BSG	0.632055	1.134293e-10	5.244290e-6	1.048858e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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