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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
14584	223945_x_at	AF274938	RP9P		retinitis pigmentosa 9 pseudogene
16802	227035_x_at	BE670798	RP9P		retinitis pigmentosa 9 pseudogene

Fetching correlation data, please wait...
Getting list of correlations for id 14584.
Getting list of p-values for id 14584.
1 of 2 done.
Getting list of correlations for id 16802.
Getting list of p-values for id 16802.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.239 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	227035_x_at	227640_s_at	AI492167		0.707868	5.106465e-14	2.360923e-9	2.360923e-9
2	227035_x_at	221838_at	N38751	KLHL22	0.699491	1.345586e-13	6.221181e-9	3.110591e-9
3	223945_x_at	227640_s_at	AI492167		0.690664	3.605143e-13	1.666802e-8	5.556006e-9
4	227035_x_at	223945_x_at	AF274938	RP9P	0.684371	7.127422e-13	3.295292e-8	8.238230e-9
5	223945_x_at	227035_x_at	BE670798	RP9P	0.684371	7.127422e-13	3.295292e-8	6.590584e-9
6	227035_x_at	228662_at	AI492369	SOCS7	0.677778	1.429520e-12	6.609242e-8	1.101540e-8
7	223945_x_at	203043_at	NM_004729	ZBED1	0.637475	7.014893e-11	3.243266e-6	4.633237e-7
8	227035_x_at	226361_at	BF056095	TMEM42	0.634808	8.896871e-11	4.113379e-6	5.141724e-7
9	227035_x_at	223041_at	AL136580	CD99L2	0.634527	9.120889e-11	4.216952e-6	4.685502e-7
10	223945_x_at	239567_at	AW974998		0.633617	9.884919e-11	4.570194e-6	4.570194e-7
11	227035_x_at	212186_at	BE855983	ACACA	0.630889	1.256298e-10	5.808370e-6	5.280337e-7
12	227035_x_at	209609_s_at	BC004517	MRPL9	0.625271	2.043060e-10	9.445884e-6	7.871570e-7
13	227035_x_at	226206_at	BG231691	MAFK	0.619785	3.254630e-10	1.504746e-5	1.157497e-6
14	223945_x_at	202486_at	NM_006796	AFG3L2	0.619776	3.256962e-10	1.505824e-5	1.075588e-6
15	227035_x_at	207760_s_at	NM_006312	NCOR2	0.619294	3.391550e-10	1.568049e-5	1.045366e-6
16	227035_x_at	217914_at	NM_017901	TPCN1	0.618076	3.755641e-10	1.736383e-5	1.085239e-6
17	227035_x_at	224708_at	AA626884	KIAA2013	0.615646	4.596702e-10	2.125239e-5	1.250141e-6
18	227035_x_at	227625_s_at	AI476536	STUB1	0.615332	4.717818e-10	2.181236e-5	1.211798e-6
19	227035_x_at	224298_s_at	BC004528	UBAC2	0.614466	5.067873e-10	2.343080e-5	1.233200e-6
20	227035_x_at	220966_x_at	NM_030978	ARPC5L	0.614344	5.118816e-10	2.366633e-5	1.183317e-6
21	223945_x_at	203602_s_at	NM_003443	ZBTB17	0.611861	6.276160e-10	2.901720e-5	1.381771e-6
22	227035_x_at	223163_s_at	BC000190	ZC3HC1	0.608729	8.096229e-10	3.743211e-5	1.701459e-6
23	227035_x_at	1553974_at	BC030758		0.607001	9.306327e-10	4.302687e-5	1.870734e-6
24	227035_x_at	218950_at	NM_022481	ARAP3	0.604180	1.166137e-9	5.391518e-5	2.246466e-6
25	227035_x_at	224776_at	BF513102	AGPAT6	0.602909	1.289980e-9	5.964091e-5	2.385637e-6
26	227035_x_at	203602_s_at	NM_003443	ZBTB17	0.601561	1.435029e-9	6.634712e-5	2.551812e-6
27	227035_x_at	223482_at	AF327923	TMEM120A	0.600247	1.591374e-9	7.357557e-5	2.725021e-6
28	227035_x_at	203043_at	NM_004729	ZBED1	0.598844	1.776099e-9	8.211615e-5	2.932720e-6
29	227035_x_at	202337_at	NM_007221	PMF1	0.595504	2.302234e-9	1.064415e-4	3.670396e-6
30	223945_x_at	225657_at	BE563042	LOC152217	0.595435	2.314594e-9	1.070130e-4	3.567098e-6
31	227035_x_at	45828_at	AI768100	ATP5SL	0.594868	2.418094e-9	1.117982e-4	3.606393e-6
32	227035_x_at	204098_at	NM_016024	RBMX2	0.594497	2.488126e-9	1.150360e-4	3.594875e-6
33	227035_x_at	226127_at	BF062547	ALKBH3	0.593860	2.613033e-9	1.208110e-4	3.660939e-6
34	223945_x_at	227852_at	BF438270	RP9	0.592540	2.891208e-9	1.336721e-4	3.931533e-6
35	227035_x_at	225272_at	AA128261	SAT2	0.592428	2.916245e-9	1.348297e-4	3.852276e-6
36	227035_x_at	211458_s_at	AF180519		0.591913	3.033014e-9	1.402284e-4	3.895232e-6
37	227035_x_at	225657_at	BE563042	LOC152217	0.591370	3.161263e-9	1.461578e-4	3.950211e-6
38	227035_x_at	225143_at	AW182455	SFXN4	0.591172	3.209361e-9	1.483816e-4	3.904779e-6
39	227035_x_at	202737_s_at	NM_012321	LSM4	0.589974	3.515147e-9	1.625193e-4	4.167162e-6
40	227035_x_at	203082_at	NM_014753	BMS1	0.588563	3.910878e-9	1.808155e-4	4.520388e-6
41	227035_x_at	209688_s_at	BC005078	CCDC93	0.587705	4.171936e-9	1.928853e-4	4.704519e-6
42	227035_x_at	201270_x_at	NM_015332	NUDCD3	0.587636	4.193710e-9	1.938920e-4	4.616476e-6
43	227035_x_at	213203_at	AI633709	SNAPC5	0.586567	4.544027e-9	2.100885e-4	4.885780e-6
44	227035_x_at	224318_s_at	AF311326	KIAA1310	0.585816	4.806516e-9	2.222244e-4	5.050555e-6
45	227035_x_at	208858_s_at	BC004998	ESYT1	0.585434	4.945803e-9	2.286642e-4	5.081428e-6
46	223945_x_at	46167_at	W22690	TTC4	0.584582	5.270030e-9	2.436546e-4	5.296839e-6
47	223945_x_at	213203_at	AI633709	SNAPC5	0.583269	5.809520e-9	2.685974e-4	5.714838e-6
48	227035_x_at	203606_at	NM_004553	NDUFS6	0.583042	5.908254e-9	2.731622e-4	5.690880e-6
49	223945_x_at	221904_at	AI141670	FAM131A	0.582142	6.314707e-9	2.919541e-4	5.958248e-6
50	223945_x_at	221255_s_at	NM_031298	TMEM93	0.580067	7.355717e-9	3.400842e-4	6.801685e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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