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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
2621	201589_at	D80000	SMC1A		structural maintenance of chromosomes 1A
21104	239688_at	AI733356	SMC1A		structural maintenance of chromosomes 1A

Fetching correlation data, please wait...
Getting list of correlations for id 2621.
Getting list of p-values for id 2621.
1 of 2 done.
Getting list of correlations for id 21104.
Getting list of p-values for id 21104.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.206 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	239688_at	205312_at	NM_003120	SPI1	0.700628	1.182050e-13	5.465089e-9	5.465089e-9
2	239688_at	200707_at	NM_002743	PRKCSH	0.691372	3.335546e-13	1.542156e-8	7.710781e-9
3	239688_at	203523_at	NM_002339	LSP1	0.688574	4.529942e-13	2.094373e-8	6.981245e-9
4	239688_at	212090_at	AL571424	GRINA	0.683236	8.045340e-13	3.719683e-8	9.299206e-9
5	239688_at	234068_s_at	AC006942	AP2A1	0.676356	1.657305e-12	7.662382e-8	1.532476e-8
6	239688_at	36564_at	W27419	RNF19B	0.673857	2.144345e-12	9.914165e-8	1.652361e-8
7	239688_at	227528_s_at	AI394529	MLL2	0.658036	1.036309e-11	4.791271e-7	6.844672e-8
8	239688_at	218045_x_at	NM_002824	PTMS	0.656578	1.192511e-11	5.513457e-7	6.891821e-8
9	239688_at	215954_s_at	AI200896	C19orf29	0.654846	1.407694e-11	6.508330e-7	7.231478e-8
10	239688_at	91952_at	AI363375	DCAF15	0.652556	1.750092e-11	8.091376e-7	8.091376e-8
11	239688_at	207824_s_at	NM_002383	MAZ	0.652318	1.789857e-11	8.275226e-7	7.522933e-8
12	239688_at	213746_s_at	AW051856	FLNA	0.651725	1.893024e-11	8.752209e-7	7.293508e-8
13	239688_at	1558215_s_at	AU145147	UBTF	0.648590	2.540223e-11	1.174447e-6	9.034206e-8
14	239688_at	221849_s_at	AA733079	DCAF15	0.648420	2.580758e-11	1.193188e-6	8.522770e-8
15	239688_at	203239_s_at	NM_014516	CNOT3	0.648118	2.654437e-11	1.227252e-6	8.181682e-8
16	239688_at	209367_at	AB002559	STXBP2	0.647883	2.713182e-11	1.254413e-6	7.840079e-8
17	239688_at	205740_s_at	NM_024321	RBM42	0.647210	2.888263e-11	1.335360e-6	7.855056e-8
18	239688_at	40850_at	L37033	FKBP8	0.646027	3.222631e-11	1.489951e-6	8.277507e-8
19	239688_at	218148_at	NM_025082	CENPT	0.644491	3.712405e-11	1.716393e-6	9.033650e-8
20	239688_at	214080_x_at	AI815793	PRKCSH	0.641233	4.998767e-11	2.311130e-6	1.155565e-7
21	239688_at	204610_s_at	NM_006848	CCDC85B	0.637679	6.887824e-11	3.184516e-6	1.516436e-7
22	239688_at	216253_s_at	N73272	PARVB	0.637587	6.944899e-11	3.210904e-6	1.459502e-7
23	239688_at	203370_s_at	NM_005451	PDLIM7	0.637334	7.103895e-11	3.284415e-6	1.428006e-7
24	239688_at	229884_s_at	AA187325	MRPL2	0.636966	7.341506e-11	3.394272e-6	1.414280e-7
25	239688_at	200649_at	BC002356	NUCB1	0.634500	9.142318e-11	4.226859e-6	1.690744e-7
26	201589_at	209022_at	AK026678	STAG2	0.634445	9.187018e-11	4.247526e-6	1.633664e-7
27	239688_at	202161_at	NM_002741	PKN1	0.633879	9.659264e-11	4.465864e-6	1.654024e-7
28	239688_at	221972_s_at	AL571362	SDF4	0.633855	9.679520e-11	4.475229e-6	1.598296e-7
29	239688_at	58994_at	AI689402	CC2D1A	0.632304	1.109742e-10	5.130781e-6	1.769235e-7
30	239688_at	208830_s_at	AI494567	SUPT6H	0.631929	1.146898e-10	5.302569e-6	1.767523e-7
31	239688_at	211121_s_at	AF180527	DOK1	0.631725	1.167633e-10	5.398436e-6	1.741431e-7
32	239688_at	223346_at	AF308802	VPS18	0.630859	1.259613e-10	5.823696e-6	1.819905e-7
33	239688_at	224981_at	AL520900	TMEM219	0.630721	1.274865e-10	5.894210e-6	1.786124e-7
34	239688_at	200646_s_at	NM_006184	NUCB1	0.629239	1.450653e-10	6.706950e-6	1.972632e-7
35	239688_at	217992_s_at	NM_024329	EFHD2	0.629213	1.453971e-10	6.722289e-6	1.920654e-7
36	239688_at	222995_s_at	AF226732	RHBDD2	0.628301	1.573592e-10	7.275346e-6	2.020929e-7
37	239688_at	244587_at	AA534039	ATF7	0.627474	1.690341e-10	7.815124e-6	2.112196e-7
38	239688_at	200922_at	NM_006801	KDELR1	0.627024	1.757327e-10	8.124826e-6	2.138112e-7
39	201589_at	200693_at	NM_006826	YWHAQ	0.626986	1.763009e-10	8.151096e-6	2.090025e-7
40	239688_at	218555_at	NM_013366	ANAPC2	0.626423	1.850697e-10	8.556513e-6	2.139128e-7
41	201589_at	201930_at	NM_005915	MCM6	0.626179	1.889870e-10	8.737625e-6	2.131128e-7
42	239688_at	221851_at	AI073983	DCAF15	0.624958	2.098681e-10	9.703041e-6	2.310248e-7
43	239688_at	200001_at	NM_001749	CAPNS1	0.624479	2.186425e-10	1.010872e-5	2.350865e-7
44	239688_at	200041_s_at	NM_004640	BAT1	0.624332	2.214031e-10	1.023635e-5	2.326443e-7
45	239688_at	212064_x_at	AI471665	MAZ	0.624145	2.249616e-10	1.040088e-5	2.311306e-7
46	239688_at	201388_at	NM_002809	PSMD3	0.622937	2.493475e-10	1.152833e-5	2.506159e-7
47	239688_at	207440_at	NM_005660	SLC35A2	0.621111	2.910632e-10	1.345702e-5	2.863195e-7
48	239688_at	209192_x_at	BC000166	KAT5	0.620862	2.972430e-10	1.374273e-5	2.863069e-7
49	239688_at	212167_s_at	AK021419	SMARCB1	0.620167	3.151570e-10	1.457097e-5	2.973667e-7
50	239688_at	208626_s_at	BC001913	VAT1	0.619493	3.335204e-10	1.541998e-5	3.083996e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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