[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4489	203832_at	NM_003095	SNRPF		small nuclear ribonucleoprotein polypeptide F

Fetching correlation data, please wait...
Getting list of correlations for id 4489.
Getting list of p-values for id 4489.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.145 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	203832_at	211787_s_at	BC006210	EIF4A1	0.856822	2.627153e-25	6.073190e-21	6.073190e-21
2	203832_at	222443_s_at	AF182415	RBM8A	0.852316	8.514905e-25	1.968391e-20	9.841953e-21
3	203832_at	200019_s_at	NM_001997	FAU	0.850512	1.348537e-24	3.117412e-20	1.039137e-20
4	203832_at	201530_x_at	NM_001416	EIF4A1	0.836527	3.928289e-23	9.081025e-19	2.270256e-19
5	203832_at	224637_at	BF211019	OST4	0.834717	5.937751e-23	1.372630e-18	2.745260e-19
6	203832_at	210908_s_at	AB055804	PFDN5	0.833028	8.692570e-23	2.009461e-18	3.349102e-19
7	203832_at	203729_at	NM_001425	EMP3	0.830874	1.404357e-22	3.246452e-18	4.637789e-19
8	203832_at	210240_s_at	U20498	CDKN2D	0.828916	2.159718e-22	4.992620e-18	6.240775e-19
9	203832_at	202596_at	BC000436	ENSA	0.824747	5.303707e-22	1.226058e-17	1.362287e-18
10	203832_at	209511_at	BC003582	POLR2F	0.814468	4.407256e-21	1.018825e-16	1.018825e-17
11	203832_at	204766_s_at	NM_002452	NUDT1	0.811594	7.781766e-21	1.798911e-16	1.635373e-17
12	203832_at	218117_at	NM_014248	RBX1	0.801121	5.709396e-20	1.319841e-15	1.099868e-16
13	203832_at	207769_s_at	NM_005710	PQBP1	0.797703	1.066470e-19	2.465358e-15	1.896429e-16
14	203832_at	207132_x_at	NM_002624	PFDN5	0.792035	2.929172e-19	6.771367e-15	4.836691e-16
15	203832_at	204767_s_at	BC000323	FEN1	0.791447	3.247104e-19	7.506329e-15	5.004220e-16
16	203832_at	220948_s_at	NM_000701	ATP1A1	0.787936	5.965956e-19	1.379150e-14	8.619688e-16
17	203832_at	222477_s_at	BC005176	TM7SF3	0.786175	8.059967e-19	1.863223e-14	1.096013e-15
18	203832_at	200819_s_at	NM_001018	RPS15	0.785852	8.514314e-19	1.968254e-14	1.093474e-15
19	203832_at	202483_s_at	NM_002882	RANBP1	0.784848	1.009173e-18	2.332906e-14	1.227845e-15
20	203832_at	202726_at	NM_000234	LIG1	0.784563	1.058926e-18	2.447920e-14	1.223960e-15
21	203832_at	226011_at	BG107767	CCDC12	0.779527	2.447168e-18	5.657118e-14	2.693866e-15
22	203832_at	203391_at	NM_004470	FKBP2	0.778940	2.694085e-18	6.227915e-14	2.830871e-15
23	203832_at	202029_x_at	NM_000999	RPL38	0.778560	2.866976e-18	6.627587e-14	2.881560e-15
24	203832_at	205436_s_at	NM_002105	H2AFX	0.778261	3.010412e-18	6.959169e-14	2.899654e-15
25	203832_at	216237_s_at	AA807529	MCM5	0.777860	3.213481e-18	7.428605e-14	2.971442e-15
26	203832_at	1558215_s_at	AU145147	UBTF	0.777811	3.239074e-18	7.487768e-14	2.879911e-15
27	203832_at	212315_s_at	AA502912	NUP210	0.777326	3.505178e-18	8.102921e-14	3.001082e-15
28	203832_at	208117_s_at	NM_031206	LAS1L	0.775988	4.351990e-18	1.006050e-13	3.593034e-15
29	203832_at	201970_s_at	NM_002482	NASP	0.775796	4.488439e-18	1.037593e-13	3.577905e-15
30	203832_at	202188_at	NM_014669	NUP93	0.775336	4.833319e-18	1.117318e-13	3.724395e-15
31	203832_at	224330_s_at	AB049647	MRPL27	0.772047	8.161942e-18	1.886796e-13	6.086439e-15
32	203832_at	218188_s_at	NM_012458	TIMM13	0.771118	9.447700e-18	2.184025e-13	6.825077e-15
33	203832_at	226936_at	BG492359	CENPW	0.770810	9.917517e-18	2.292632e-13	6.947371e-15
34	203832_at	214527_s_at	AB041836	PQBP1	0.769266	1.262436e-17	2.918372e-13	8.583448e-15
35	203832_at	200805_at	NM_006816	LMAN2	0.767941	1.550787e-17	3.584954e-13	1.024273e-14
36	203832_at	226437_at	AI079540	YIF1B	0.767067	1.774978e-17	4.103216e-13	1.139782e-14
37	203832_at	212114_at	BE967207	ATXN7L3B	0.766534	1.926738e-17	4.454040e-13	1.203795e-14
38	203832_at	201755_at	NM_006739	MCM5	0.763007	3.296760e-17	7.621121e-13	2.005558e-14
39	203832_at	202264_s_at	NM_006114	TOMM40	0.762212	3.716513e-17	8.591463e-13	2.202939e-14
40	203832_at	209796_s_at	BC001027	CNPY2	0.762166	3.742325e-17	8.651132e-13	2.162783e-14
41	203832_at	218206_x_at	NM_016558	SCAND1	0.759772	5.352797e-17	1.237406e-12	3.018064e-14
42	203832_at	202356_s_at	NM_002096	GTF2F1	0.758225	6.731131e-17	1.556035e-12	3.704846e-14
43	203832_at	200968_s_at	NM_000942	PPIB	0.757738	7.231895e-17	1.671797e-12	3.887900e-14
44	203832_at	223640_at	AF285447	HCST	0.757310	7.701606e-17	1.780380e-12	4.046319e-14
45	203832_at	228879_at	BG502554	SNORD104	0.757165	7.867384e-17	1.818703e-12	4.041562e-14
46	203832_at	221711_s_at	BC006244	C19orf62	0.755803	9.601810e-17	2.219650e-12	4.825327e-14
47	203832_at	217747_s_at	NM_001013	RPS9	0.755573	9.929895e-17	2.295494e-12	4.884029e-14
48	203832_at	218391_at	NM_007241	SNF8	0.755279	1.036380e-16	2.395799e-12	4.991248e-14
49	203832_at	212085_at	AA916851	SLC25A6	0.753877	1.269827e-16	2.935459e-12	5.990733e-14
50	203832_at	208675_s_at	D29643	DDOST	0.753697	1.303412e-16	3.013097e-12	6.026193e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation