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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
12545	219715_s_at	NM_018319	TDP1		tyrosyl-DNA phosphodiesterase 1
16058	226044_at	AK023514	TDP1		tyrosyl-DNA phosphodiesterase 1

Fetching correlation data, please wait...
Getting list of correlations for id 12545.
Getting list of p-values for id 12545.
1 of 2 done.
Getting list of correlations for id 16058.
Getting list of p-values for id 16058.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.237 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	219715_s_at	160020_at	Z48481	MMP14	-0.675400	1.829593e-12	8.458938e-8	8.458938e-8
2	219715_s_at	224847_at	AW051349	CDK6	0.667593	4.047240e-12	1.871201e-7	9.356006e-8
3	226044_at	222627_at	AK002205	VPS54	0.661593	7.332393e-12	3.390059e-7	1.130020e-7
4	219715_s_at	222398_s_at	BC002360	EFTUD2	0.654436	1.463920e-11	6.768289e-7	1.692072e-7
5	219715_s_at	218768_at	NM_020401	NUP107	0.653910	1.539026e-11	7.115533e-7	1.423107e-7
6	226044_at	227577_at	AI168350	EXOC8	0.651991	1.846070e-11	8.535119e-7	1.422520e-7
7	226044_at	205527_s_at	NM_015487	GEMIN4	0.651256	1.978556e-11	9.147654e-7	1.306808e-7
8	226044_at	229285_at	AI669749	RNASEL	0.645786	3.295165e-11	1.523487e-6	1.904358e-7
9	226044_at	219303_at	NM_024546	RNF219	0.644366	3.755213e-11	1.736185e-6	1.929095e-7
10	226044_at	227904_at	BF000175	AZI2	0.644005	3.881941e-11	1.794777e-6	1.794777e-7
11	219715_s_at	202691_at	NM_006938	SNRPD1	0.642170	4.590484e-11	2.122364e-6	1.929422e-7
12	226044_at	235232_at	AI061377	GMEB1	0.641597	4.836299e-11	2.236015e-6	1.863346e-7
13	226044_at	218104_at	NM_017746	TEX10	0.641594	4.837611e-11	2.236621e-6	1.720478e-7
14	226044_at	221509_at	AB014731	DENR	0.640670	5.260824e-11	2.432289e-6	1.737349e-7
15	226044_at	219258_at	NM_017858	TIPIN	0.639411	5.894512e-11	2.725268e-6	1.816846e-7
16	219715_s_at	225904_at	N64686	C1orf96	0.636368	7.744139e-11	3.580425e-6	2.237766e-7
17	219715_s_at	217978_s_at	NM_017582	UBE2Q1	0.635762	8.173263e-11	3.778826e-6	2.222839e-7
18	226044_at	214221_at	AI825212	ALMS1	0.634452	9.181992e-11	4.245202e-6	2.358446e-7
19	226044_at	225702_at	AA973041	C8orf76	0.632575	1.083568e-10	5.009768e-6	2.636720e-7
20	219715_s_at	227578_at	H28597	LOC100128191	0.630793	1.266897e-10	5.857370e-6	2.928685e-7
21	226044_at	213725_x_at	AI693140	XYLT1	0.629518	1.415811e-10	6.545862e-6	3.117077e-7
22	219715_s_at	204478_s_at	NM_002871	RABIF	0.629223	1.452683e-10	6.716334e-6	3.052879e-7
23	219715_s_at	221998_s_at	BF062886	VRK3	0.626809	1.790101e-10	8.276353e-6	3.598414e-7
24	219715_s_at	223060_at	AF061731	C14orf119	0.622746	2.534120e-10	1.171625e-5	4.881770e-7
25	219715_s_at	218057_x_at	NM_006067	COX4NB	0.622259	2.641127e-10	1.221098e-5	4.884394e-7
26	226044_at	208107_s_at	NM_030941	LOC81691	0.622047	2.689056e-10	1.243258e-5	4.781761e-7
27	219715_s_at	202462_s_at	NM_014829	DDX46	0.622002	2.699163e-10	1.247931e-5	4.621967e-7
28	219715_s_at	227533_at	AA732944		0.620001	3.196024e-10	1.477650e-5	5.277320e-7
29	226044_at	229743_at	AI886666	ZNF438	0.619955	3.208251e-10	1.483303e-5	5.114836e-7
30	226044_at	205769_at	NM_003645	SLC27A2	0.618372	3.663705e-10	1.693877e-5	5.646258e-7
31	226044_at	212688_at	BC003393	PIK3CB	0.617565	3.919103e-10	1.811958e-5	5.845026e-7
32	226044_at	224414_s_at	AF356193	CARD6	0.613652	5.419406e-10	2.505608e-5	7.830025e-7
33	219715_s_at	212131_at	BG054966	LSM14A	0.612924	5.752965e-10	2.659826e-5	8.060078e-7
34	226044_at	226826_at	AU152993		0.612671	5.873934e-10	2.715754e-5	7.987513e-7
35	226044_at	208715_at	BF002031	TMCO1	0.612353	6.028957e-10	2.787428e-5	7.964080e-7
36	226044_at	211137_s_at	AF189723	ATP2C1	0.611364	6.536240e-10	3.021965e-5	8.394348e-7
37	219715_s_at	220615_s_at	NM_018099	FAR2	0.611345	6.546267e-10	3.026601e-5	8.180003e-7
38	226044_at	223590_at	AL136732	ZNF700	0.610911	6.782207e-10	3.135685e-5	8.251804e-7
39	226044_at	215093_at	U82671	NSDHL	0.610538	6.991187e-10	3.232305e-5	8.287962e-7
40	226044_at	36553_at	AA669799	ASMTL	0.609956	7.329939e-10	3.388924e-5	8.472310e-7
41	219715_s_at	212108_at	AB020694	FAF2	0.609804	7.421035e-10	3.431041e-5	8.368393e-7
42	219715_s_at	212621_at	AB006624	TMEM194A	0.609680	7.495995e-10	3.465698e-5	8.251663e-7
43	226044_at	208940_at	AI885670	SEPHS1	0.609275	7.746245e-10	3.581399e-5	8.328835e-7
44	226044_at	225073_at	NM_016488	PPHLN1	0.609270	7.749084e-10	3.582711e-5	8.142526e-7
45	226044_at	238005_s_at	AI760013	SIN3A	0.608991	7.926316e-10	3.664653e-5	8.143673e-7
46	219715_s_at	213361_at	AW129593	TDRD7	0.606700	9.533880e-10	4.407894e-5	9.582379e-7
47	226044_at	227211_at	BE544837	PHF19	0.606200	9.924279e-10	4.588391e-5	9.762534e-7
48	219715_s_at	226012_at	AI686514	ANKRD11	0.605794	1.025204e-9	4.739929e-5	9.874851e-7
49	219715_s_at	1552863_a_at	NM_145815	CACNG6	-0.605196	1.075422e-9	4.972107e-5	1.014716e-6
50	226044_at	212493_s_at	AI761110	SETD2	0.602985	1.282232e-9	5.928272e-5	1.185654e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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