[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
11969	218806_s_at	AF118887	VAV3		vav 3 guanine nucleotide exchange factor
11970	218807_at	NM_006113	VAV3		vav 3 guanine nucleotide exchange factor

Fetching correlation data, please wait...
Getting list of correlations for id 11969.
Getting list of p-values for id 11969.
1 of 2 done.
Getting list of correlations for id 11970.
Getting list of p-values for id 11970.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.229 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	218807_at	225603_s_at	BE962119	C8orf83	0.692279	3.018337e-13	1.395498e-8	1.395498e-8
2	218806_s_at	236122_at	H40696		0.690090	3.839138e-13	1.774987e-8	8.874935e-9
3	218806_s_at	218972_at	NM_018259	TTC17	0.689631	4.036816e-13	1.866382e-8	6.221272e-9
4	218807_at	207540_s_at	NM_003177	SYK	0.685969	6.004685e-13	2.776206e-8	6.940515e-9
5	218807_at	242521_at	BF512556		0.670638	2.977939e-12	1.376821e-7	2.753641e-8
6	218807_at	239294_at	AA810265		0.667881	3.932093e-12	1.817964e-7	3.029939e-8
7	218806_s_at	224200_s_at	AB035274	RAD18	0.666711	4.420610e-12	2.043825e-7	2.919750e-8
8	218807_at	204220_at	NM_004877	GMFG	0.660343	8.284234e-12	3.830133e-7	4.787666e-8
9	218806_s_at	208679_s_at	AF279893	ARPC2	0.659860	8.683588e-12	4.014770e-7	4.460855e-8
10	218807_at	202156_s_at	N36839	CELF2	0.659129	9.322451e-12	4.310142e-7	4.310142e-8
11	218807_at	65472_at	AI161338	C2orf68	0.657353	1.106876e-11	5.117530e-7	4.652300e-8
12	218806_s_at	234993_at	BE301702	ABHD13	0.655069	1.378112e-11	6.371565e-7	5.309637e-8
13	218807_at	228159_at	N45312		0.653471	1.604629e-11	7.418842e-7	5.706802e-8
14	218806_s_at	234488_s_at	AF198534		0.649356	2.364922e-11	1.093398e-6	7.809985e-8
15	218806_s_at	216997_x_at	AL358975	TLE4	0.645477	3.390456e-11	1.567543e-6	1.045029e-7
16	218806_s_at	208325_s_at	NM_006738	AKAP13	0.644456	3.724281e-11	1.721884e-6	1.076178e-7
17	218807_at	230925_at	AI093231	APBB1IP	0.642141	4.602752e-11	2.128036e-6	1.251786e-7
18	218807_at	223451_s_at	AF096895	CKLF	0.641460	4.896866e-11	2.264017e-6	1.257787e-7
19	218806_s_at	208249_s_at	NM_014305	TGDS	0.639265	5.972540e-11	2.761344e-6	1.453339e-7
20	218806_s_at	204291_at	NM_014803	ZNF518A	0.639089	6.068327e-11	2.805630e-6	1.402815e-7
21	218806_s_at	241863_x_at	AA703326		0.632964	1.047133e-10	4.841313e-6	2.305387e-7
22	218806_s_at	218519_at	NM_017945	SLC35A5	0.632269	1.113198e-10	5.146759e-6	2.339436e-7
23	218806_s_at	242760_x_at	AA808203	PIGB	0.630664	1.281284e-10	5.923891e-6	2.575605e-7
24	218807_at	229597_s_at	BF592952	WDFY4	0.629547	1.412335e-10	6.529791e-6	2.720746e-7
25	218807_at	205804_s_at	NM_025228	TRAF3IP3	0.629001	1.480955e-10	6.847048e-6	2.738819e-7
26	218806_s_at	218006_s_at	NM_006963	ZNF22	0.628991	1.482212e-10	6.852858e-6	2.635714e-7
27	218806_s_at	236125_at	AA832073		0.628731	1.516113e-10	7.009598e-6	2.596147e-7
28	218807_at	239734_at	AI807627		0.628731	1.516131e-10	7.009680e-6	2.503457e-7
29	218807_at	235568_at	BF433657	C19orf59	0.628678	1.523027e-10	7.041563e-6	2.428125e-7
30	218806_s_at	203620_s_at	NM_014824	FCHSD2	0.627347	1.709036e-10	7.901558e-6	2.633853e-7
31	218806_s_at	215040_at	AL049218	RNASEH2B	0.625649	1.977987e-10	9.145025e-6	2.950008e-7
32	218806_s_at	242693_at	AW664859		0.624635	2.157365e-10	9.974363e-6	3.116989e-7
33	218806_s_at	240673_at	BF115851		0.622696	2.545054e-10	1.176680e-5	3.565698e-7
34	218806_s_at	239598_s_at	AA789296	LPCAT2	0.621804	2.744992e-10	1.269120e-5	3.732705e-7
35	218807_at	204613_at	NM_002661	PLCG2	0.619176	3.425172e-10	1.583594e-5	4.524555e-7
36	218807_at	227645_at	BG236366	PIK3R5	0.618281	3.691678e-10	1.706811e-5	4.741140e-7
37	218807_at	226917_s_at	AA604393	ANAPC4	0.618263	3.697218e-10	1.709372e-5	4.619924e-7
38	218806_s_at	214499_s_at	AF249273	BCLAF1	0.618228	3.708263e-10	1.714478e-5	4.511785e-7
39	218807_at	227929_at	AU151342		0.617939	3.798771e-10	1.756324e-5	4.503394e-7
40	218807_at	230263_s_at	BF447954	DOCK5	0.616973	4.117187e-10	1.903540e-5	4.758851e-7
41	218807_at	212098_at	AL134724		0.616296	4.355632e-10	2.013783e-5	4.911666e-7
42	218806_s_at	201317_s_at	NM_002787	PSMA2	0.614362	5.111514e-10	2.363257e-5	5.626803e-7
43	218806_s_at	212460_at	BE738425	C14orf147	0.613708	5.394376e-10	2.494036e-5	5.800084e-7
44	218807_at	244845_at	BF725383		0.613302	5.577224e-10	2.578574e-5	5.860395e-7
45	218806_s_at	242946_at	AW293276	CD53	0.612693	5.863254e-10	2.710817e-5	6.024037e-7
46	218807_at	229285_at	AI669749	RNASEL	0.612528	5.943063e-10	2.747716e-5	5.973295e-7
47	218806_s_at	227033_at	AI825800	PDIA3	0.612321	6.044371e-10	2.794555e-5	5.945861e-7
48	218806_s_at	202074_s_at	NM_021980	OPTN	-0.611432	6.500370e-10	3.005381e-5	6.261210e-7
49	218807_at	202553_s_at	NM_015484	SYF2	0.611312	6.564175e-10	3.034881e-5	6.193634e-7
50	218807_at	217714_x_at	AV756729	STMN1	0.610676	6.913498e-10	3.196387e-5	6.392773e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation