[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 6694.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
6694 8094124 NM_001105662 USP17 link to infopage ubiquitin specific peptidase 17

Fetching correlation data, please wait...
Getting list of correlations for id 6694.
Getting list of p-values for id 6694.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.106 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8094124 8094132 NM_001105662 USP17 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8094124 8094128 NM_001105662 USP17 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 8094124 8094126 NM_001105662 USP17 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
4 8094124 8094116 NM_001105662 USP17 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
5 8094124 8094120 NM_001105662 USP17 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
6 8094124 8094118 NM_001105662 USP17 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
7 8094124 8094122 NM_001105662 USP17 link to infopage 0.988615 1.499539e-86 2.598251e-82 3.711788e-83
8 8094124 8094130 NM_001105662 USP17 link to infopage 0.988337 5.158227e-86 8.937659e-82 1.117207e-82
9 8094124 8009014 NM_006852 TLK2 link to infopage -0.763894 2.611408e-21 4.524787e-17 5.027541e-18
10 8094124 8019334 NM_178493 NOTUM link to infopage 0.745871 6.958143e-20 1.205637e-15 1.205637e-16
11 8094124 8079869 NM_005778 RBM5 link to infopage -0.743069 1.130743e-19 1.959239e-15 1.781127e-16
12 8094124 7919888 NM_001038707 CDC42SE1 link to infopage -0.739756 1.991828e-19 3.451241e-15 2.876034e-16
13 8094124 8050719 NM_006277 ITSN2 link to infopage -0.738153 2.611825e-19 4.525509e-15 3.481161e-16
14 8094124 8062492 NM_020336 RALGAPB link to infopage -0.736771 3.293159e-19 5.706056e-15 4.075755e-16
15 8094124 7916747 NM_002227 JAK1 link to infopage -0.726706 1.708790e-18 2.960821e-14 1.973881e-15
16 8094124 7937089 NM_173575 STK32C link to infopage 0.726482 1.771213e-18 3.068981e-14 1.918113e-15
17 8094124 8015685 NM_001991 EZH1 link to infopage -0.722376 3.393417e-18 5.879774e-14 3.458691e-15
18 8094124 8014865 NM_006160 NEUROD2 link to infopage 0.721465 3.913437e-18 6.780812e-14 3.767118e-15
19 8094124 7995332 link to infopage 0.720057 4.873573e-18 8.444441e-14 4.444442e-15
20 8094124 7988286 NM_025137 SPG11 link to infopage -0.719770 5.095744e-18 8.829396e-14 4.414698e-15
21 8094124 7907310 NM_015172 BAT2L2 link to infopage -0.719182 5.582474e-18 9.672754e-14 4.606073e-15
22 8094124 8143988 NM_170606 MLL3 link to infopage -0.717744 6.969427e-18 1.207593e-13 5.489058e-15
23 8094124 8138592 AB052759 TRA2A link to infopage -0.717598 7.127653e-18 1.235009e-13 5.369602e-15
24 8094124 7926127 NM_001025077 CELF2 link to infopage -0.716739 8.131353e-18 1.408920e-13 5.870498e-15
25 8094124 8012961 NM_006311 NCOR1 link to infopage -0.716639 8.257378e-18 1.430756e-13 5.723023e-15
26 8094124 7920766 NM_018489 ASH1L link to infopage -0.714814 1.090689e-17 1.889837e-13 7.268606e-15
27 8094124 7996448 NM_003946 NOL3 link to infopage 0.714538 1.137380e-17 1.970738e-13 7.299030e-15
28 8094124 7955908 NM_005337 NCKAP1L link to infopage -0.713876 1.257311e-17 2.178542e-13 7.780507e-15
29 8094124 7928870 ENST00000363306 link to infopage 0.712896 1.457816e-17 2.525958e-13 8.710201e-15
30 8094124 8029640 NM_212550 BLOC1S3 link to infopage 0.709326 2.486245e-17 4.307916e-13 1.435972e-14
31 8094124 8073214 NM_001024843 TNRC6B link to infopage -0.709233 2.520607e-17 4.367455e-13 1.408856e-14
32 8094124 7985695 NM_006738 AKAP13 link to infopage -0.708376 2.861761e-17 4.958573e-13 1.549554e-14
33 8094124 8018922 NM_004762 CYTH1 link to infopage -0.707753 3.137380e-17 5.436139e-13 1.647315e-14
34 8094124 8109843 NM_004946 DOCK2 link to infopage -0.707385 3.312156e-17 5.738973e-13 1.687933e-14
35 8094124 7931810 NM_001300 KLF6 link to infopage -0.705788 4.186391e-17 7.253760e-13 2.072503e-14
36 8094124 8110289 NM_022455 NSD1 link to infopage -0.705111 4.621493e-17 8.007662e-13 2.224350e-14
37 8094124 8014650 NM_006310 NPEPPS link to infopage -0.704485 5.062949e-17 8.772572e-13 2.370965e-14
38 8094124 7944850 NM_032811 TBRG1 link to infopage -0.704170 5.299728e-17 9.182839e-13 2.416536e-14
39 8094124 8108510 NM_020690 ANKHD1-EIF4EBP3 link to infopage -0.700575 8.898882e-17 1.541909e-12 3.953613e-14
40 8094124 7913001 NM_020765 UBR4 link to infopage -0.699788 9.958173e-17 1.725453e-12 4.313632e-14
41 8094124 7914809 NM_024874 KIAA0319L link to infopage -0.698753 1.153788e-16 1.999169e-12 4.876021e-14
42 8094124 8126018 NM_007271 STK38 link to infopage -0.698253 1.238703e-16 2.146301e-12 5.110241e-14
43 8094124 8011542 NM_015113 ZZEF1 link to infopage -0.697969 1.289411e-16 2.234163e-12 5.195728e-14
44 8094124 8068289 NM_138927 SON link to infopage -0.697808 1.319227e-16 2.285825e-12 5.195058e-14
45 8094124 8017776 NM_014877 HELZ link to infopage -0.695470 1.833564e-16 3.177016e-12 7.060036e-14
46 8094124 8001693 NM_016284 CNOT1 link to infopage -0.695127 1.923528e-16 3.332897e-12 7.245428e-14
47 8094124 8116591 NM_001453 FOXC1 link to infopage 0.694818 2.008473e-16 3.480081e-12 7.404428e-14
48 8094124 7941769 NM_012308 KDM2A link to infopage -0.694337 2.148222e-16 3.722225e-12 7.754635e-14
49 8094124 8164607 NM_015033 FNBP1 link to infopage -0.694151 2.204572e-16 3.819862e-12 7.795637e-14
50 8094124 8045332 ENST00000458407 link to infopage 0.693982 2.257106e-16 3.910887e-12 7.821774e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!