[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
User requested variable id 15716.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
15716	8164607	NM_015033	FNBP1		formin binding protein 1

Fetching correlation data, please wait...
Getting list of correlations for id 15716.
Getting list of p-values for id 15716.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.107 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8164607	7944285	NM_001655	ARCN1	0.908679	7.282415e-41	1.261824e-36	1.261824e-36
2	8164607	8001693	NM_016284	CNOT1	0.889137	9.517427e-37	1.649085e-32	8.245423e-33
3	8164607	7907310	NM_015172	BAT2L2	0.884040	8.431159e-36	1.460867e-31	4.869556e-32
4	8164607	7916747	NM_002227	JAK1	0.883478	1.065379e-35	1.845982e-31	4.614956e-32
5	8164607	7977693	NM_020920	CHD8	0.881451	2.455436e-35	4.254535e-31	8.509069e-32
6	8164607	7952557	NM_003139	SRPR	0.872308	8.858625e-34	1.534934e-29	2.558223e-30
7	8164607	8006850	NM_016507	CDK12	0.871513	1.194089e-33	2.068998e-29	2.955711e-30
8	8164607	8012961	NM_006311	NCOR1	0.868832	3.222035e-33	5.582821e-29	6.978526e-30
9	8164607	8002729	NR_027264	GLG1	0.868184	4.083334e-33	7.075193e-29	7.861325e-30
10	8164607	8014551	NM_007247	SYNRG	0.865957	9.123233e-33	1.580783e-28	1.580783e-29
11	8164607	7936614	NM_003750	EIF3A	0.864916	1.321651e-32	2.290024e-28	2.081840e-29
12	8164607	8164177	NM_001006617	MAPKAP1	0.864403	1.585034e-32	2.746388e-28	2.288657e-29
13	8164607	8108510	NM_020690	ANKHD1-EIF4EBP3	0.863558	2.134685e-32	3.698769e-28	2.845207e-29
14	8164607	8062492	NM_020336	RALGAPB	0.863333	2.309795e-32	4.002182e-28	2.858702e-29
15	8164607	8100251	NM_015030	FRYL	0.862632	2.950598e-32	5.112502e-28	3.408335e-29
16	8164607	7990487	NM_015477	SIN3A	0.862328	3.279809e-32	5.682924e-28	3.551828e-29
17	8164607	8160914	NM_007126	VCP	0.862258	3.359881e-32	5.821666e-28	3.424509e-29
18	8164607	8068289	NM_138927	SON	0.861455	4.437609e-32	7.689045e-28	4.271691e-29
19	8164607	8154059	NM_003070	SMARCA2	0.861396	4.529220e-32	7.847780e-28	4.130410e-29
20	8164607	8008213	NM_007067	MYST2	0.861158	4.915717e-32	8.517462e-28	4.258731e-29
21	8164607	7947894	NM_198700	CELF1	0.860808	5.544325e-32	9.606651e-28	4.574596e-29
22	8164607	7920766	NM_018489	ASH1L	0.860524	6.113065e-32	1.059211e-27	4.814594e-29
23	8164607	8101324	NM_031370	HNRNPD	0.860116	7.028284e-32	1.217791e-27	5.294743e-29
24	8164607	7905700	NM_014847	UBAP2L	0.859055	1.008345e-31	1.747159e-27	7.279829e-29
25	8164607	7972069	NM_015057	MYCBP2	0.858020	1.429694e-31	2.477231e-27	9.908925e-29
26	8164607	8152148	NM_015902	UBR5	0.856252	2.580264e-31	4.470823e-27	1.719547e-28
27	8164607	7971422	NM_015070	ZC3H13	0.856233	2.596782e-31	4.499445e-27	1.666461e-28
28	8164607	7915882	NM_014774	KIAA0494	0.855506	3.302567e-31	5.722359e-27	2.043699e-28
29	8164607	8126018	NM_007271	STK38	0.854658	4.364071e-31	7.561626e-27	2.607457e-28
30	8164607	7978718	NM_006364	SEC23A	0.853936	5.524697e-31	9.572642e-27	3.190881e-28
31	8164607	8172119	NM_004229	MED14	0.853816	5.746298e-31	9.956611e-27	3.211810e-28
32	8164607	8163972	NM_001100588	RC3H2	0.853668	6.029367e-31	1.044708e-26	3.264714e-28
33	8164607	8045090	NM_020120	UGGT1	0.853113	7.219941e-31	1.250999e-26	3.790907e-28
34	8164607	8124059	NM_005124	NUP153	0.852627	8.447381e-31	1.463678e-26	4.304934e-28
35	8164607	8158783	NM_005085	NUP214	0.850810	1.513067e-30	2.621691e-26	7.490546e-28
36	8164607	8018922	NM_004762	CYTH1	0.848746	2.905202e-30	5.033843e-26	1.398290e-27
37	8164607	8009014	NM_006852	TLK2	0.847926	3.754972e-30	6.506240e-26	1.758443e-27
38	8164607	8083282	NM_032383	HPS3	0.847291	4.575705e-30	7.928323e-26	2.086401e-27
39	8164607	8041283	NM_016252	BIRC6	0.846841	5.260671e-30	9.115165e-26	2.337222e-27
40	8164607	8150599	NM_006904	PRKDC	0.846137	6.538349e-30	1.132900e-25	2.832250e-27
41	8164607	8087951	NM_018165	PBRM1	0.845573	7.774164e-30	1.347029e-25	3.285438e-27
42	8164607	8062213	NM_016436	PHF20	0.844945	9.423231e-30	1.632763e-25	3.887532e-27
43	8164607	7960594	NM_001273	CHD4	0.844527	1.070455e-29	1.854777e-25	4.313435e-27
44	8164607	8017776	NM_014877	HELZ	0.844400	1.112552e-29	1.927719e-25	4.381179e-27
45	8164607	8049199	NM_001103147	GIGYF2	0.844008	1.253196e-29	2.171412e-25	4.825360e-27
46	8164607	8145954	NM_006283	TACC1	0.843415	1.499762e-29	2.598637e-25	5.649211e-27
47	8164607	8063242	NM_006420	ARFGEF2	0.842999	1.700330e-29	2.946162e-25	6.268429e-27
48	8164607	7948814	NM_001079559	HNRNPUL2	0.842291	2.103193e-29	3.644203e-25	7.592089e-27
49	8164607	7914791	NM_005066	SFPQ	0.842065	2.250715e-29	3.899813e-25	7.958802e-27
50	8164607	8133309	NR_027775	PMS2L5	0.841182	2.928841e-29	5.074803e-25	1.014961e-26

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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