[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 8119.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
8119 8144414 NR_027000 LOC349196 link to infopage hypothetical LOC349196

Fetching correlation data, please wait...
Getting list of correlations for id 8119.
Getting list of p-values for id 8119.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.092 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8144414 8144412 NR_027000 LOC349196 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8144414 8149216 NR_027000 LOC349196 link to infopage 0.894157 9.979661e-38 1.729176e-33 8.645879e-34
3 8144414 8149165 NR_027000 LOC349196 link to infopage 0.889032 9.962912e-37 1.726274e-32 5.754246e-33
4 8144414 8149167 NR_027000 LOC349196 link to infopage 0.889032 9.962912e-37 1.726274e-32 4.315684e-33
5 8144414 8144490 NR_027000 LOC349196 link to infopage 0.876346 1.882804e-34 3.262334e-30 6.524668e-31
6 8144414 8144492 NR_027000 LOC349196 link to infopage 0.876346 1.882804e-34 3.262334e-30 5.437223e-31
7 8144414 8144416 NR_027000 LOC349196 link to infopage 0.876346 1.882804e-34 3.262334e-30 4.660477e-31
8 8144414 8144418 NR_027000 LOC349196 link to infopage 0.876346 1.882804e-34 3.262334e-30 4.077917e-31
9 8144414 8149226 NR_027000 LOC349196 link to infopage 0.872069 9.694236e-34 1.679720e-29 1.866356e-30
10 8144414 8149224 NR_027000 LOC349196 link to infopage 0.872069 9.694236e-34 1.679720e-29 1.679720e-30
11 8144414 8149220 NR_027000 LOC349196 link to infopage 0.872069 9.694236e-34 1.679720e-29 1.527018e-30
12 8144414 8149218 NR_027000 LOC349196 link to infopage 0.872069 9.694236e-34 1.679720e-29 1.399767e-30
13 8144414 8149222 NR_027000 LOC349196 link to infopage 0.872069 9.694236e-34 1.679720e-29 1.292092e-30
14 8144414 8144410 NR_027000 LOC349196 link to infopage 0.845644 7.607696e-30 1.318185e-25 9.415610e-27
15 8144414 8149151 NR_027000 LOC349196 link to infopage 0.831463 4.805602e-28 8.326666e-24 5.551111e-25
16 8144414 8149214 NR_027000 LOC349196 link to infopage 0.831463 4.805602e-28 8.326666e-24 5.204166e-25
17 8144414 8144420 NR_027000 LOC349196 link to infopage 0.818317 1.611566e-26 2.792361e-22 1.642565e-23
18 8144414 8144494 NR_027000 LOC349196 link to infopage 0.818317 1.611566e-26 2.792361e-22 1.551312e-23
19 8144414 8149157 NR_027000 LOC349196 link to infopage 0.784095 4.572030e-23 7.921956e-19 4.169450e-20
20 8144414 8149153 NR_027000 LOC349196 link to infopage 0.784095 4.572030e-23 7.921956e-19 3.960978e-20
21 8144414 8149210 NR_027000 LOC349196 link to infopage 0.740251 1.831487e-19 3.173417e-15 1.511151e-16
22 8144414 8149161 NR_027000 LOC349196 link to infopage 0.740251 1.831487e-19 3.173417e-15 1.442462e-16
23 8144414 7953735 NR_027000 LOC349196 link to infopage 0.664013 1.154482e-14 2.000370e-10 8.697262e-12
24 8144414 8149228 NR_027000 LOC349196 link to infopage 0.607529 6.343773e-12 1.099185e-7 4.579940e-9
25 8144414 8000600 ENST00000357418 link to infopage 0.470013 4.221797e-7 7.315108e-3 2.926043e-4
26 8144414 7952268 NM_006288 THY1 link to infopage 0.459713 8.084297e-7 1.400766e-2 5.387562e-4
27 8144414 8020878 NM_014268 MAPRE2 link to infopage -0.446225 1.834089e-6 3.177926e-2 1.177010e-3
28 8144414 7994350 ENST00000357646 link to infopage 0.444467 2.035607e-6 3.527096e-2 1.259677e-3
29 8144414 8029854 NM_005628 SLC1A5 link to infopage 0.443278 2.183450e-6 3.783264e-2 1.304574e-3
30 8144414 7991815 NM_006849 PDIA2 link to infopage 0.438900 2.820595e-6 4.887244e-2 1.629081e-3
31 8144414 8037363 NM_145296 CADM4 link to infopage 0.438621 2.866680e-6 4.967096e-2 1.602289e-3
32 8144414 8144488 NR_027000 LOC349196 link to infopage 0.434643 3.605803e-6 6.247774e-2 1.952429e-3
33 8144414 8035408 NM_000923 PDE4C link to infopage 0.433210 3.913726e-6 6.781313e-2 2.054943e-3
34 8144414 8040949 NM_173853 KRTCAP3 link to infopage 0.432578 4.057172e-6 7.029861e-2 2.067606e-3
35 8144414 7898537 NM_002584 PAX7 link to infopage 0.428532 5.100617e-6 8.837839e-2 2.525097e-3
36 8144414 8042532 NM_012476 VAX2 link to infopage 0.424900 6.248185e-6 1.082623e-1 3.007286e-3
37 8144414 7997245 link to infopage 0.422901 6.979648e-6 1.209364e-1 3.268550e-3
38 8144414 8173486 NR_002226 INGX link to infopage 0.412416 1.233169e-5 2.136712e-1 5.622928e-3
39 8144414 8010590 NM_001080519 BAHCC1 link to infopage 0.411660 1.283886e-5 2.224590e-1 5.704076e-3
40 8144414 8107328 NR_027706 FLJ11235 link to infopage 0.408170 1.544609e-5 2.676345e-1 6.690861e-3
41 8144414 8153625 NM_017570 OPLAH link to infopage 0.407866 1.569492e-5 2.719459e-1 6.632826e-3
42 8144414 7978054 link to infopage 0.407399 1.608485e-5 2.787022e-1 6.635766e-3
43 8144414 8167407 NM_181532 ERAS link to infopage 0.403791 1.942047e-5 3.364985e-1 7.825547e-3
44 8144414 7949440 NM_001099409 EHBP1L1 link to infopage 0.403535 1.968062e-5 3.410061e-1 7.750139e-3
45 8144414 7960117 NM_018663 PXMP2 link to infopage 0.403521 1.969530e-5 3.412604e-1 7.583565e-3
46 8144414 7999196 NM_021646 ZNF500 link to infopage 0.403376 1.984359e-5 3.438298e-1 7.474561e-3
47 8144414 8005833 NR_003064 PYY2 link to infopage 0.402633 2.062264e-5 3.573286e-1 7.602735e-3
48 8144414 8031090 NM_145814 CACNG6 link to infopage 0.402484 2.078148e-5 3.600808e-1 7.501683e-3
49 8144414 8004784 NM_001141 ALOX15B link to infopage 0.402325 2.095303e-5 3.630532e-1 7.409250e-3
50 8144414 7989718 NM_016563 RASL12 link to infopage 0.402173 2.111879e-5 3.659252e-1 7.318504e-3

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!