[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
6564 8002051 NM_001138 AGRP link to infopage agouti related protein homolog (mouse)

Fetching correlation data, please wait...
Getting list of correlations for id 6564.
Getting list of p-values for id 6564.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.169 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8002051 7905507 NM_178428 LCE2A link to infopage 0.716056 9.027101e-18 1.564126e-13 1.564126e-13
2 8002051 8024754 NM_032607 CREB3L3 link to infopage 0.712376 1.576498e-17 2.731598e-13 1.365799e-13
3 8002051 8019585 NM_030966 KRTAP1-3 link to infopage 0.692173 2.901077e-16 5.026697e-12 1.675566e-12
4 8002051 8015189 NM_030966 KRTAP1-3 link to infopage 0.692173 2.901077e-16 5.026697e-12 1.256674e-12
5 8002051 7987701 NM_016642 SPTBN5 link to infopage 0.687814 5.272297e-16 9.135309e-12 1.827062e-12
6 8002051 7897066 NR_024445 LOC100128003 link to infopage 0.685937 6.797157e-16 1.177743e-11 1.962906e-12
7 8002051 8004802 NM_017622 C17orf59 link to infopage 0.682266 1.110994e-15 1.925020e-11 2.750028e-12
8 8002051 8049152 NM_000751 CHRND link to infopage 0.679371 1.628764e-15 2.822159e-11 3.527699e-12
9 8002051 7955589 NM_002135 NR4A1 link to infopage 0.678635 1.793955e-15 3.108385e-11 3.453761e-12
10 8002051 8032839 NM_032108 SEMA6B link to infopage 0.674599 3.030934e-15 5.251699e-11 5.251699e-12
11 8002051 8012887 NM_001007530 CDRT15 link to infopage 0.674231 3.177981e-15 5.506488e-11 5.005898e-12
12 8002051 7913450 NM_005529 HSPG2 link to infopage 0.673831 3.345787e-15 5.797246e-11 4.831038e-12
13 8002051 8013465 NM_005557 KRT16 link to infopage 0.672737 3.850197e-15 6.671236e-11 5.131720e-12
14 8002051 8137151 NM_198455 SSPO link to infopage 0.671916 4.276144e-15 7.409274e-11 5.292339e-12
15 8002051 7977216 NM_015656 KIF26A link to infopage 0.670470 5.140013e-15 8.906101e-11 5.937400e-12
16 8002051 8001014 NM_173502 PRSS36 link to infopage 0.670105 5.383092e-15 9.327283e-11 5.829552e-12
17 8002051 8013384 NM_000691 ALDH3A1 link to infopage 0.667251 7.713293e-15 1.336482e-10 7.861660e-12
18 8002051 7992302 NM_020825 CRAMP1L link to infopage 0.666510 8.462700e-15 1.466332e-10 8.146289e-12
19 8002051 8038225 NM_020904 PLEKHA4 link to infopage 0.664488 1.088441e-14 1.885942e-10 9.926010e-12
20 8002051 7973510 NM_006032 CPNE6 link to infopage 0.663617 1.212429e-14 2.100776e-10 1.050388e-11
21 8002051 7896921 NM_152228 TAS1R3 link to infopage 0.662041 1.472219e-14 2.550914e-10 1.214721e-11
22 8002051 8114550 NM_004883 NRG2 link to infopage 0.662000 1.479625e-14 2.563746e-10 1.165339e-11
23 8002051 8037888 NM_015063 SLC8A2 link to infopage 0.660380 1.804425e-14 3.126528e-10 1.359360e-11
24 8002051 7945688 NR_003512 INS-IGF2 link to infopage 0.659391 2.035366e-14 3.526678e-10 1.469449e-11
25 8002051 8175815 NM_001039582 PNCK link to infopage 0.657955 2.422634e-14 4.197698e-10 1.679079e-11
26 8002051 8153322 NM_015193 ARC link to infopage 0.657457 2.572905e-14 4.458073e-10 1.714644e-11
27 8002051 7920297 NM_020672 S100A14 link to infopage 0.657453 2.574248e-14 4.460400e-10 1.652000e-11
28 8002051 8037732 NM_001029861 NANOS2 link to infopage 0.656701 2.818335e-14 4.883328e-10 1.744046e-11
29 8002051 8070933 NM_006657 FTCD link to infopage 0.656247 2.976585e-14 5.157529e-10 1.778458e-11
30 8002051 8030753 NM_001030047 KLK3 link to infopage 0.655995 3.068043e-14 5.315999e-10 1.772000e-11
31 8002051 7921936 NM_177398 LMX1A link to infopage 0.654651 3.604079e-14 6.244788e-10 2.014448e-11
32 8002051 7992518 NM_014353 RAB26 link to infopage 0.654463 3.685940e-14 6.386628e-10 1.995821e-11
33 8002051 8164440 NM_052844 WDR34 link to infopage 0.652708 4.541798e-14 7.869574e-10 2.384719e-11
34 8002051 8032051 NM_182577 ODF3L2 link to infopage 0.652278 4.779326e-14 8.281138e-10 2.435629e-11
35 8002051 8164580 NM_004878 PTGES link to infopage 0.651358 5.328429e-14 9.232570e-10 2.637877e-11
36 8002051 7980889 ENST00000363172 link to infopage 0.651103 5.490903e-14 9.514088e-10 2.642802e-11
37 8002051 7936762 NM_001001976 ATE1 link to infopage -0.650937 5.599455e-14 9.702176e-10 2.622210e-11
38 8002051 8067409 NM_005560 LAMA5 link to infopage 0.650821 5.676217e-14 9.835181e-10 2.588206e-11
39 8002051 7989785 NM_020962 IGDCC4 link to infopage 0.650315 6.024600e-14 1.043882e-9 2.676621e-11
40 8002051 8059028 NM_194302 CCDC108 link to infopage 0.650163 6.133077e-14 1.062678e-9 2.656696e-11
41 8002051 7937560 NM_002457 MUC2 link to infopage 0.648391 7.547701e-14 1.307790e-9 3.189732e-11
42 8002051 8125843 NM_012391 SPDEF link to infopage 0.648043 7.859565e-14 1.361827e-9 3.242445e-11
43 8002051 8059244 NM_024536 CHPF link to infopage 0.647064 8.808525e-14 1.526253e-9 3.549426e-11
44 8002051 8067820 BC024764 IQSEC3 link to infopage 0.646955 8.920680e-14 1.545686e-9 3.512923e-11
45 8002051 7942715 NM_006189 OMP link to infopage 0.646624 9.269046e-14 1.606048e-9 3.568995e-11
46 8002051 7936826 NM_022466 IKZF5 link to infopage -0.646353 9.565356e-14 1.657389e-9 3.603020e-11
47 8002051 8075016 NM_207644 C22orf36 link to infopage 0.646320 9.601796e-14 1.663703e-9 3.539794e-11
48 8002051 8028407 NM_000540 RYR1 link to infopage 0.644707 1.156705e-13 2.004223e-9 4.175465e-11
49 8002051 8032699 NM_015174 ZFR2 link to infopage 0.644241 1.220412e-13 2.114608e-9 4.315526e-11
50 8002051 7980352 NM_021257 NGB link to infopage 0.644203 1.225829e-13 2.123993e-9 4.247986e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!