[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4185	8033789	NM_001008727	ZNF121		zinc finger protein 121

Fetching correlation data, please wait...
Getting list of correlations for id 4185.
Getting list of p-values for id 4185.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.124 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8033789	8028227	NM_152604	ZNF383	0.789402	1.469246e-23	2.545763e-19	2.545763e-19
2	8033789	8027416	NM_003796	C19orf2	0.775560	2.658223e-22	4.605903e-18	2.302952e-18
3	8033789	7901418	NM_152265	BTF3L4	0.771738	5.703187e-22	9.881912e-18	3.293971e-18
4	8033789	8128472	NM_006828	ASCC3	0.771200	6.342551e-22	1.098974e-17	2.747434e-18
5	8033789	7938313	NM_006391	IPO7	0.768325	1.113827e-21	1.929928e-17	3.859855e-18
6	8033789	7961964	NM_018164	C12orf11	0.766319	1.641890e-21	2.844903e-17	4.741505e-18
7	8033789	8150818	NM_006756	TCEA1	0.764033	2.543195e-21	4.406594e-17	6.295134e-18
8	8033789	8147156	NM_007013	WWP1	0.763681	2.719188e-21	4.711536e-17	5.889421e-18
9	8033789	8027650	NM_005499	UBA2	0.757516	8.620031e-21	1.493593e-16	1.659547e-17
10	8033789	7957540	NM_014050	MRPL42	0.754272	1.560461e-20	2.703811e-16	2.703811e-17
11	8033789	8089584	NM_015412	C3orf17	0.753703	1.729936e-20	2.997460e-16	2.724964e-17
12	8033789	8028186	NM_007145	ZNF146	0.753280	1.867581e-20	3.235958e-16	2.696632e-17
13	8033789	8036813	NM_001005851	ZNF780B	0.749473	3.692268e-20	6.397593e-16	4.921225e-17
14	8033789	8142019	NM_002553	ORC5L	0.749342	3.778578e-20	6.547143e-16	4.676530e-17
15	8033789	7916928	NM_030816	ANKRD13C	0.748349	4.504734e-20	7.805353e-16	5.203569e-17
16	8033789	7943297	NM_014679	CEP57	0.748338	4.513287e-20	7.820173e-16	4.887608e-17
17	8033789	7947221	NM_018362	LIN7C	0.746433	6.307534e-20	1.092906e-15	6.428861e-17
18	8033789	8046759	NM_018981	DNAJC10	0.746407	6.336019e-20	1.097842e-15	6.099122e-17
19	8033789	7968835	NM_016248	AKAP11	0.745905	6.916679e-20	1.198453e-15	6.307647e-17
20	8033789	8078600	NM_006756	TCEA1	0.744905	8.232551e-20	1.426454e-15	7.132270e-17
21	8033789	7975224	NM_004094	EIF2S1	0.744901	8.237587e-20	1.427327e-15	6.796794e-17
22	8033789	8088219	NM_001112736	C3orf63	0.744627	8.639303e-20	1.496932e-15	6.804236e-17
23	8033789	7919157	NM_001143883	PPIAL4B	0.744176	9.340944e-20	1.618505e-15	7.036980e-17
24	8033789	8140730	NM_024315	C7orf23	0.743997	9.634095e-20	1.669300e-15	6.955415e-17
25	8033789	7946812	NM_001017	RPS13	0.743745	1.006382e-19	1.743758e-15	6.975034e-17
26	8033789	8041149	NM_015131	WDR43	0.743254	1.095431e-19	1.898053e-15	7.300205e-17
27	8033789	8063283	NM_001316	CSE1L	0.742647	1.216037e-19	2.107028e-15	7.803808e-17
28	8033789	7917103	NM_015534	ZZZ3	0.742127	1.329585e-19	2.303772e-15	8.227757e-17
29	8033789	8058052	NM_002156	HSPD1	0.741778	1.411424e-19	2.445574e-15	8.433014e-17
30	8033789	7980891	NM_001128596	TC2N	0.741481	1.484873e-19	2.572839e-15	8.576129e-17
31	8033789	7999520	NM_015659	RSL1D1	0.741223	1.551976e-19	2.689108e-15	8.674543e-17
32	8033789	8158372	NM_003011	SET	0.740885	1.643992e-19	2.848546e-15	8.901705e-17
33	8033789	7939137	NM_006360	EIF3M	0.740275	1.823995e-19	3.160437e-15	9.577081e-17
34	8033789	8083333	NM_032025	EIF2A	0.740202	1.846582e-19	3.199572e-15	9.410507e-17
35	8033789	8052562	NM_006430	CCT4	0.740119	1.872853e-19	3.245092e-15	9.271690e-17
36	8033789	8106025	NM_018429	BDP1	0.736498	3.447185e-19	5.972937e-15	1.659149e-16
37	8033789	7986765	NM_000969	RPL5	0.735878	3.823240e-19	6.624528e-15	1.790413e-16
38	8033789	7955425	NM_005171	ATF1	0.735823	3.858201e-19	6.685105e-15	1.759238e-16
39	8033789	7915995	NM_007051	FAF1	0.735671	3.957297e-19	6.856809e-15	1.758156e-16
40	8033789	7962427	NM_031292	PUS7L	0.735204	4.276816e-19	7.410438e-15	1.852610e-16
41	8033789	8177560	NM_018429	BDP1	0.733921	5.289303e-19	9.164776e-15	2.235311e-16
42	8033789	7939093	NM_181706	DNAJC24	0.733874	5.330502e-19	9.236160e-15	2.199086e-16
43	8033789	8051707	NM_003618	MAP4K3	0.732629	6.542968e-19	1.133700e-14	2.636512e-16
44	8033789	8098985	NM_024511	HAUS3	0.732621	6.551606e-19	1.135197e-14	2.579993e-16
45	8033789	7909992	NM_015176	FBXO28	0.732415	6.777754e-19	1.174381e-14	2.609737e-16
46	8033789	8022170	NM_001024662	RPL6	0.730726	8.931284e-19	1.547524e-14	3.364182e-16
47	8033789	8021418	NM_006785	MALT1	0.730639	9.059851e-19	1.569800e-14	3.340001e-16
48	8033789	8155946	NM_033305	VPS13A	0.730200	9.729122e-19	1.685765e-14	3.512010e-16
49	8033789	7971563	NM_020357	PCNP	0.729391	1.109425e-18	1.922300e-14	3.923062e-16
50	8033789	7975068	NM_001123329	ZBTB1	0.729158	1.151997e-18	1.996065e-14	3.992130e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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