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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
7345 8003149 NM_172347 KCNG4 link to infopage potassium voltage-gated channel, subfamily G, member 4

Fetching correlation data, please wait...
Getting list of correlations for id 7345.
Getting list of p-values for id 7345.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.133 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8003149 8001014 NM_173502 PRSS36 link to infopage 0.775660 2.604978e-22 4.513645e-18 4.513645e-18
2 8003149 8049166 NM_005199 CHRNG link to infopage 0.757830 8.135795e-21 1.409689e-16 7.048446e-17
3 8003149 7985418 ENST00000342039 link to infopage 0.755634 1.217747e-20 2.109990e-16 7.033299e-17
4 8003149 7985459 ENST00000342039 link to infopage 0.755634 1.217747e-20 2.109990e-16 5.274974e-17
5 8003149 7990928 ENST00000342039 link to infopage 0.755634 1.217747e-20 2.109990e-16 4.219979e-17
6 8003149 8131056 NM_017781 CYP2W1 link to infopage 0.748050 4.748174e-20 8.227161e-16 1.371193e-16
7 8003149 7913450 NM_005529 HSPG2 link to infopage 0.746724 5.994206e-20 1.038616e-15 1.483737e-16
8 8003149 7955589 NM_002135 NR4A1 link to infopage 0.745792 7.054664e-20 1.222362e-15 1.527952e-16
9 8003149 7964388 NM_020142 NDUFA4L2 link to infopage 0.744470 8.876999e-20 1.538118e-15 1.709020e-16
10 8003149 8135099 NM_133457 EMID2 link to infopage 0.742699 1.205131e-19 2.088131e-15 2.088131e-16
11 8003149 7922590 AK125993 NCRNA00083 link to infopage 0.741635 1.446316e-19 2.506032e-15 2.278211e-16
12 8003149 8060126 NM_198998 AQP12A link to infopage 0.738334 2.533122e-19 4.389140e-15 3.657617e-16
13 8003149 8170825 NM_001048181 OPN1MW2 link to infopage 0.737879 2.734991e-19 4.738920e-15 3.645323e-16
14 8003149 8014269 NM_139285 GAS2L2 link to infopage 0.737281 3.023765e-19 5.239278e-15 3.742342e-16
15 8003149 8032051 NM_182577 ODF3L2 link to infopage 0.737226 3.051546e-19 5.287414e-15 3.524943e-16
16 8003149 7923347 NM_005558 LAD1 link to infopage 0.736255 3.589913e-19 6.220242e-15 3.887652e-16
17 8003149 8067409 NM_005560 LAMA5 link to infopage 0.732255 6.957778e-19 1.205574e-14 7.091613e-16
18 8003149 8151609 NM_172239 REXO1L1 link to infopage 0.732197 7.024019e-19 1.217052e-14 6.761399e-16
19 8003149 8006679 ENST00000411344 link to infopage 0.731109 8.391973e-19 1.454077e-14 7.653037e-16
20 8003149 8016640 NR_024193 HILS1 link to infopage 0.730968 8.586061e-19 1.487707e-14 7.438534e-16
21 8003149 8024373 NM_001039846 IZUMO4 link to infopage 0.730496 9.272033e-19 1.606565e-14 7.650310e-16
22 8003149 7897066 NR_024445 LOC100128003 link to infopage 0.729813 1.035959e-18 1.795007e-14 8.159123e-16
23 8003149 8035254 NM_031941 USHBP1 link to infopage 0.727054 1.616264e-18 2.800500e-14 1.217609e-15
24 8003149 8067506 BC137326 C20orf151 link to infopage 0.726947 1.644041e-18 2.848629e-14 1.186929e-15
25 8003149 8049729 NM_198998 AQP12A link to infopage 0.726633 1.728769e-18 2.995438e-14 1.198175e-15
26 8003149 8049509 NM_015893 PRLH link to infopage 0.725228 2.162856e-18 3.747581e-14 1.441377e-15
27 8003149 8053872 NM_001002036 ASTL link to infopage 0.723207 2.977629e-18 5.159338e-14 1.910866e-15
28 8003149 7921936 NM_177398 LMX1A link to infopage 0.722814 3.167596e-18 5.488493e-14 1.960176e-15
29 8003149 7928838 NM_007078 LDB3 link to infopage 0.722694 3.227879e-18 5.592946e-14 1.928602e-15
30 8003149 8067820 BC024764 IQSEC3 link to infopage 0.721843 3.688715e-18 6.391436e-14 2.130479e-15
31 8003149 8083887 NM_005602 CLDN11 link to infopage 0.720331 4.670392e-18 8.092388e-14 2.610448e-15
32 8003149 8087271 NM_017730 QRICH1 link to infopage -0.719986 4.927932e-18 8.538628e-14 2.668321e-15
33 8003149 7937560 NM_002457 MUC2 link to infopage 0.718868 5.860465e-18 1.015443e-13 3.077099e-15
34 8003149 8006999 NM_172220 CSF3 link to infopage 0.718507 6.195761e-18 1.073540e-13 3.157469e-15
35 8003149 8170562 NM_175742 MAGEA2 link to infopage 0.718404 6.295033e-18 1.090740e-13 3.116401e-15
36 8003149 7927383 NM_153034 ZNF488 link to infopage 0.717518 7.215229e-18 1.250183e-13 3.472730e-15
37 8003149 7940654 NM_003357 SCGB1A1 link to infopage 0.717462 7.277342e-18 1.260945e-13 3.407960e-15
38 8003149 8005328 NM_016239 MYO15A link to infopage 0.716987 7.828588e-18 1.356460e-13 3.569630e-15
39 8003149 7898616 NM_022819 PLA2G2F link to infopage 0.716354 8.625134e-18 1.494477e-13 3.831992e-15
40 8003149 8125568 NM_080680 COL11A2 link to infopage 0.715699 9.532683e-18 1.651728e-13 4.129320e-15
41 8003149 8170716 NM_005393 PLXNB3 link to infopage 0.714941 1.069720e-17 1.853503e-13 4.520740e-15
42 8003149 8066668 NM_020967 NCOA5 link to infopage -0.714668 1.115059e-17 1.932063e-13 4.600150e-15
43 8003149 8028407 NM_000540 RYR1 link to infopage 0.714490 1.145547e-17 1.984889e-13 4.616021e-15
44 8003149 8175732 NM_175742 MAGEA2 link to infopage 0.713550 1.320741e-17 2.288447e-13 5.201016e-15
45 8003149 8010287 NM_030968 C1QTNF1 link to infopage 0.712744 1.491442e-17 2.584221e-13 5.742713e-15
46 8003149 8090044 NM_001031702 SEMA5B link to infopage 0.712279 1.599510e-17 2.771471e-13 6.024937e-15
47 8003149 8107897 NM_003687 PDLIM4 link to infopage 0.712179 1.623842e-17 2.813630e-13 5.986447e-15
48 8003149 7897196 NM_152492 CCDC27 link to infopage 0.712166 1.627021e-17 2.819139e-13 5.873207e-15
49 8003149 7999291 NM_152459 C16orf89 link to infopage 0.712042 1.657668e-17 2.872241e-13 5.861717e-15
50 8003149 8086985 NM_000094 COL7A1 link to infopage 0.711546 1.785464e-17 3.093673e-13 6.187345e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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