[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
1850	7950654	NM_024079	ALG8		asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)

Fetching correlation data, please wait...
Getting list of correlations for id 1850.
Getting list of p-values for id 1850.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.138 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7950654	7913571	NM_001102398	HNRNPR	0.790882	1.064105e-23	1.843774e-19	1.843774e-19
2	7950654	8009366	NM_015462	NOL11	0.790062	1.272858e-23	2.205481e-19	1.102740e-19
3	7950654	8136401	NM_015135	NUP205	0.779755	1.130091e-22	1.958108e-18	6.527027e-19
4	7950654	8017235	NM_006380	APPBP2	0.779435	1.207055e-22	2.091464e-18	5.228661e-19
5	7950654	7917156	NM_003902	FUBP1	0.776704	2.109217e-22	3.654640e-18	7.309280e-19
6	7950654	8160622	NM_018225	SMU1	0.775444	2.721254e-22	4.715116e-18	7.858527e-19
7	7950654	8054614	NM_022662	ANAPC1	0.775225	2.843918e-22	4.927657e-18	7.039510e-19
8	7950654	8093191	NM_001098424	DLG1	0.773729	3.839392e-22	6.652514e-18	8.315642e-19
9	7950654	7966368	NM_002710	PPP1CC	0.773190	4.275098e-22	7.407463e-18	8.230514e-19
10	7950654	7954021	NM_001310	CREBL2	0.773012	4.428916e-22	7.673983e-18	7.673983e-19
11	7950654	7946728	NM_148976	PSMA1	0.771706	5.739906e-22	9.945535e-18	9.041396e-19
12	7950654	7914180	NM_014752	SPCS2	0.770006	8.021121e-22	1.389820e-17	1.158183e-18
13	7950654	7924351	NM_004446	EPRS	0.769864	8.247883e-22	1.429111e-17	1.099316e-18
14	7950654	8073799	NM_013236	ATXN10	0.768595	1.056757e-21	1.831043e-17	1.307888e-18
15	7950654	7968835	NM_016248	AKAP11	0.768176	1.146492e-21	1.986526e-17	1.324351e-18
16	7950654	7924190	NM_144567	ANGEL2	0.767804	1.232455e-21	2.135474e-17	1.334671e-18
17	7950654	8001496	NM_007006	NUDT21	0.767671	1.264575e-21	2.191128e-17	1.288899e-18
18	7950654	7942553	NM_014752	SPCS2	0.767662	1.266697e-21	2.194806e-17	1.219336e-18
19	7950654	7969703	NM_002271	IPO5	0.765604	1.883767e-21	3.264002e-17	1.717896e-18
20	7950654	7899957	NM_005095	ZMYM4	0.765367	1.971413e-21	3.415867e-17	1.707934e-18
21	7950654	8173713	NM_032121	MAGT1	0.764419	2.363053e-21	4.094462e-17	1.949744e-18
22	7950654	7916969	NM_005455	ZRANB2	0.764113	2.504969e-21	4.340360e-17	1.972891e-18
23	7950654	8173629	NM_004299	ABCB7	0.763302	2.922024e-21	5.062991e-17	2.201301e-18
24	7950654	7971513	NM_001984	ESD	0.763061	3.058919e-21	5.300189e-17	2.208412e-18
25	7950654	7916562	NM_002136	HNRNPA1	0.761832	3.857545e-21	6.683968e-17	2.673587e-18
26	7950654	7916185	NM_001009881	ZCCHC11	0.761683	3.967676e-21	6.874792e-17	2.644151e-18
27	7950654	7987325	NM_014691	AQR	0.761601	4.028803e-21	6.980707e-17	2.585447e-18
28	7950654	8103859	NM_001012732	DCTD	0.761335	4.235942e-21	7.339617e-17	2.621292e-18
29	7950654	8099649	NM_001358	DHX15	0.760402	5.044737e-21	8.741017e-17	3.014144e-18
30	7950654	8047641	NM_177538	CYP20A1	0.759958	5.480644e-21	9.496312e-17	3.165437e-18
31	7950654	8041257	NM_017964	SLC30A6	0.759888	5.552645e-21	9.621068e-17	3.103570e-18
32	7950654	8132070	NM_002047	GARS	0.759384	6.099665e-21	1.056889e-16	3.302778e-18
33	7950654	8137596	NM_014671	UBE3C	0.759327	6.164122e-21	1.068057e-16	3.236538e-18
34	7950654	7956910	NM_018448	CAND1	0.759173	6.343744e-21	1.099180e-16	3.232884e-18
35	7950654	8084971	NM_152699	SENP5	0.758097	7.744198e-21	1.341837e-16	3.833821e-18
36	7950654	8078569	NM_002078	GOLGA4	0.757674	8.372533e-21	1.450709e-16	4.029747e-18
37	7950654	7974146	NM_017922	PRPF39	0.757560	8.551845e-21	1.481778e-16	4.004806e-18
38	7950654	7957633	NM_006838	METAP2	0.757527	8.604045e-21	1.490823e-16	3.923218e-18
39	7950654	8106534	NM_001114394	PAPD4	0.757472	8.691712e-21	1.506013e-16	3.861572e-18
40	7950654	8162850	NM_017746	TEX10	0.757388	8.826177e-21	1.529312e-16	3.823279e-18
41	7950654	7974387	NM_145251	STYX	0.757324	8.931494e-21	1.547560e-16	3.774536e-18
42	7950654	8163795	NM_005047	PSMD5	0.754757	1.428780e-20	2.475648e-16	5.894400e-18
43	7950654	7971820	NM_016075	VPS36	0.753908	1.667117e-20	2.888614e-16	6.717706e-18
44	7950654	8097543	NM_014487	ZNF330	0.753782	1.705422e-20	2.954985e-16	6.715876e-18
45	7950654	8117140	NM_017774	CDKAL1	0.753554	1.777224e-20	3.079397e-16	6.843104e-18
46	7950654	8020241	NM_020232	PSMG2	0.753480	1.801136e-20	3.120829e-16	6.784411e-18
47	7950654	8105545	NM_016338	IPO11	0.752877	2.008324e-20	3.479822e-16	7.403877e-18
48	7950654	8156718	NM_002486	NCBP1	0.752051	2.330464e-20	4.037995e-16	8.412489e-18
49	7950654	7914791	NM_005066	SFPQ	0.751111	2.757690e-20	4.778249e-16	9.751528e-18
50	7950654	7983335	NM_016396	CTDSPL2	0.751035	2.795705e-20	4.844117e-16	9.688235e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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	KEGG Pathway:
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