[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
7553	7981439	NM_001015049	BAG5		BCL2-associated athanogene 5

Fetching correlation data, please wait...
Getting list of correlations for id 7553.
Getting list of p-values for id 7553.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.126 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7981439	8129706	NM_006620	HBS1L	0.808586	1.816375e-25	3.147232e-21	3.147232e-21
2	7981439	8022170	NM_001024662	RPL6	0.807727	2.234209e-25	3.871213e-21	1.935607e-21
3	7981439	7986769	NM_130839	UBE3A	0.806235	3.194360e-25	5.534867e-21	1.844956e-21
4	7981439	8078270	NM_002948	RPL15	0.804516	4.802916e-25	8.322012e-21	2.080503e-21
5	7981439	7966534	NM_001024662	RPL6	0.804279	5.079475e-25	8.801206e-21	1.760241e-21
6	7981439	7987361	NM_014106	ZNF770	0.800725	1.164342e-24	2.017456e-20	3.362426e-21
7	7981439	8044766	NM_016133	INSIG2	0.799449	1.561729e-24	2.706008e-20	3.865726e-21
8	7981439	7935320	NM_020123	TM9SF3	0.799353	1.596775e-24	2.766733e-20	3.458416e-21
9	7981439	8063283	NM_001316	CSE1L	0.798231	2.063127e-24	3.574780e-20	3.971978e-21
10	7981439	7900395	NM_012421	RLF	0.793776	5.622344e-24	9.741836e-20	9.741836e-21
11	7981439	7913712	NM_006625	SRSF10	0.793463	6.026360e-24	1.044187e-19	9.492613e-21
12	7981439	8101013	NM_015436	RCHY1	0.792348	7.712146e-24	1.336284e-19	1.113570e-20
13	7981439	7901895	NM_032852	ATG4C	0.790398	1.182755e-23	2.049359e-19	1.576430e-20
14	7981439	7954752	NM_012062	DNM1L	0.790224	1.228536e-23	2.128683e-19	1.520488e-20
15	7981439	8039947	NM_006625	SRSF10	0.789921	1.312284e-23	2.273795e-19	1.515864e-20
16	7981439	8152222	NM_015878	AZIN1	0.789550	1.422751e-23	2.465200e-19	1.540750e-20
17	7981439	7924190	NM_144567	ANGEL2	0.789136	1.556262e-23	2.696535e-19	1.586197e-20
18	7981439	8084146	NM_001013439	FXR1	0.788726	1.700841e-23	2.947046e-19	1.637248e-20
19	7981439	8135235	NM_004279	PMPCB	0.787985	1.995692e-23	3.457935e-19	1.819966e-20
20	7981439	7943580	NM_003478	CUL5	0.786721	2.617262e-23	4.534930e-19	2.267465e-20
21	7981439	7908421	NM_004600	TROVE2	0.785362	3.496465e-23	6.058324e-19	2.884916e-20
22	7981439	7912852	NM_001412	EIF1AX	0.784761	3.971769e-23	6.881885e-19	3.128129e-20
23	7981439	7912292	NM_032368	LZIC	0.783548	5.130171e-23	8.889047e-19	3.864803e-20
24	7981439	7939137	NM_006360	EIF3M	0.782839	5.952839e-23	1.031448e-18	4.297702e-20
25	7981439	8042270	NM_001001521	UGP2	0.782022	7.061702e-23	1.223581e-18	4.894324e-20
26	7981439	8045455	NM_014607	UBXN4	0.781975	7.130946e-23	1.235579e-18	4.752227e-20
27	7981439	8115022	NM_001025105	CSNK1A1	0.781874	7.284049e-23	1.262107e-18	4.674471e-20
28	7981439	8040386	NM_004939	DDX1	0.781815	7.373424e-23	1.277593e-18	4.562833e-20
29	7981439	7993872	NM_003366	UQCRC2	0.781363	8.100392e-23	1.403555e-18	4.839844e-20
30	7981439	7989885	NM_001031723	DNAJB14	0.781020	8.699556e-23	1.507372e-18	5.024573e-20
31	7981439	7934812	NM_015045	WAPAL	0.780697	9.301883e-23	1.611737e-18	5.199153e-20
32	7981439	8023605	NM_176787	PIGN	0.779689	1.145623e-22	1.985021e-18	6.203191e-20
33	7981439	7975068	NM_001123329	ZBTB1	0.779035	1.310376e-22	2.270489e-18	6.880270e-20
34	7981439	7924351	NM_004446	EPRS	0.778511	1.459308e-22	2.528544e-18	7.436893e-20
35	7981439	8116969	NM_016167	NOL7	0.777937	1.640968e-22	2.843304e-18	8.123727e-20
36	7981439	7974566	NM_018229	MUDENG	0.777878	1.660691e-22	2.877480e-18	7.992999e-20
37	7981439	8128716	NM_006016	CD164	0.777314	1.863021e-22	3.228057e-18	8.724478e-20
38	7981439	7932678	NM_139312	YME1L1	0.775612	2.630627e-22	4.558087e-18	1.199497e-19
39	7981439	8105714	NM_139168	SFRS12	0.775580	2.647366e-22	4.587092e-18	1.176177e-19
40	7981439	7974725	NM_016475	JKAMP	0.775403	2.743449e-22	4.753574e-18	1.188394e-19
41	7981439	8092564	NM_004593	TRA2B	0.775358	2.768452e-22	4.796897e-18	1.169975e-19
42	7981439	8152465	NM_003756	EIF3H	0.774857	3.062537e-22	5.306458e-18	1.263442e-19
43	7981439	8054771	NM_025181	SLC35F5	0.774791	3.103206e-22	5.376926e-18	1.250448e-19
44	7981439	7957404	BC029120	C12orf26	0.774765	3.119556e-22	5.405254e-18	1.228467e-19
45	7981439	8084694	NM_001967	EIF4A2	0.774397	3.358342e-22	5.818998e-18	1.293111e-19
46	7981439	8017810	NM_002816	PSMD12	0.773719	3.846748e-22	6.665261e-18	1.448970e-19
47	7981439	8116664	NM_003913	PRPF4B	0.773584	3.951686e-22	6.847087e-18	1.456827e-19
48	7981439	8048146	NM_021141	XRCC5	0.772644	4.765344e-22	8.256911e-18	1.720190e-19
49	7981439	7970681	NM_005977	RNF6	0.772472	4.931800e-22	8.545330e-18	1.743945e-19
50	7981439	7971967	NM_014953	DIS3	0.771833	5.597643e-22	9.699036e-18	1.939807e-19

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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