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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 4 variables:
id Label1 AccNum GeneSym Info Gene Name
13072 8155422 NM_201453 CBWD3 link to infopage COBW domain containing 3
13751 8161537 NM_201453 CBWD3 link to infopage COBW domain containing 3
13864 8155636 NM_201453 CBWD3 link to infopage COBW domain containing 3
13933 8161587 NM_201453 CBWD3 link to infopage COBW domain containing 3

Fetching correlation data, please wait...
Getting list of correlations for id 13072.
Getting list of p-values for id 13072.
1 of 4 done.
Getting list of correlations for id 13751.
Getting list of p-values for id 13751.
2 of 4 done.
Getting list of correlations for id 13864.
Getting list of p-values for id 13864.
3 of 4 done.
Getting list of correlations for id 13933.
Getting list of p-values for id 13933.
4 of 4 done.
Calculating corrections for multiple testing (n=69308), please wait...
Done; whole program took 0.420 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8161587 8155636 NM_201453 CBWD3 link to infopage 0.994969 9.556153e-105 6.623179e-100 6.623179e-100
2 8155636 8161587 NM_201453 CBWD3 link to infopage 0.994969 9.556153e-105 6.623179e-100 3.311589e-100
3 8161537 8155636 NM_201453 CBWD3 link to infopage 0.991699 1.394972e-93 9.668269e-89 3.222756e-89
4 8155636 8161537 NM_201453 CBWD3 link to infopage 0.991699 1.394972e-93 9.668269e-89 2.417067e-89
5 8161537 8161587 NM_201453 CBWD3 link to infopage 0.990974 1.018401e-91 7.058331e-87 1.411666e-87
6 8161587 8161537 NM_201453 CBWD3 link to infopage 0.990974 1.018401e-91 7.058331e-87 1.176388e-87
7 8161587 8159815 NM_001145355 CBWD1 link to infopage 0.989961 2.384062e-89 1.652346e-84 2.360494e-85
8 8155636 8159815 NM_001145355 CBWD1 link to infopage 0.988940 3.398652e-87 2.355537e-82 2.944422e-83
9 8155636 8044613 NM_001145355 CBWD1 link to infopage 0.988072 1.631805e-85 1.130972e-80 1.256635e-81
10 8161587 8044613 NM_001145355 CBWD1 link to infopage 0.986976 1.465651e-83 1.015814e-78 1.015814e-79
11 8161537 8159815 NM_001145355 CBWD1 link to infopage 0.986122 3.782233e-82 2.621390e-77 2.383082e-78
12 8155422 8161587 NM_201453 CBWD3 link to infopage 0.985847 1.030233e-81 7.140336e-77 5.950280e-78
13 8161587 8155422 NM_201453 CBWD3 link to infopage 0.985847 1.030233e-81 7.140336e-77 5.492566e-78
14 8161537 8044613 NM_001145355 CBWD1 link to infopage 0.983799 1.033127e-78 7.160393e-74 5.114567e-75
15 8155636 8155422 NM_201453 CBWD3 link to infopage 0.982510 5.158526e-77 3.575271e-72 2.383514e-73
16 8155422 8155636 NM_201453 CBWD3 link to infopage 0.982510 5.158526e-77 3.575271e-72 2.234545e-73
17 8155422 8159815 NM_001145355 CBWD1 link to infopage 0.980281 2.351689e-74 1.629909e-69 9.587698e-71
18 8155422 8044613 NM_001145355 CBWD1 link to infopage 0.978321 2.947106e-72 2.042581e-67 1.134767e-68
19 8155422 8161537 NM_201453 CBWD3 link to infopage 0.970881 9.703137e-66 6.725050e-61 3.539500e-62
20 8161537 8155422 NM_201453 CBWD3 link to infopage 0.970881 9.703137e-66 6.725050e-61 3.362525e-62
21 8155422 8161575 ENST00000377395 link to infopage 0.935597 2.251533e-48 1.560493e-43 7.430917e-45
22 8155422 8042601 NM_014497 ZNF638 link to infopage 0.918590 2.535838e-43 1.757538e-38 7.988811e-40
23 8155636 8161575 ENST00000377395 link to infopage 0.915492 1.602139e-42 1.110410e-37 4.827870e-39
24 8155422 7933947 NM_022079 HERC4 link to infopage 0.913644 4.653493e-42 3.225243e-37 1.343851e-38
25 8155636 7926836 NM_021252 RAB18 link to infopage 0.913442 5.220027e-42 3.617896e-37 1.447158e-38
26 8155422 7926836 NM_021252 RAB18 link to infopage 0.910771 2.331042e-41 1.615598e-36 6.213840e-38
27 8155636 8045919 NM_022826 MARCH7 link to infopage 0.910710 2.411013e-41 1.671025e-36 6.188981e-38
28 8161587 8161575 ENST00000377395 link to infopage 0.910046 3.469480e-41 2.404627e-36 8.587954e-38
29 8155422 7970907 NM_014887 N4BP2L2 link to infopage 0.909989 3.580271e-41 2.481414e-36 8.556600e-38
30 8155636 7933947 NM_022079 HERC4 link to infopage 0.909778 4.017405e-41 2.784383e-36 9.281276e-38
31 8155636 8042601 NM_014497 ZNF638 link to infopage 0.908887 6.512016e-41 4.513348e-36 1.455919e-37
32 8161587 7933947 NM_022079 HERC4 link to infopage 0.908820 6.749967e-41 4.678267e-36 1.461958e-37
33 8161587 8042601 NM_014497 ZNF638 link to infopage 0.907737 1.205426e-40 8.354568e-36 2.531687e-37
34 8155636 7958216 NM_015275 KIAA1033 link to infopage 0.907473 1.387587e-40 9.617085e-36 2.828554e-37
35 8161587 7926836 NM_021252 RAB18 link to infopage 0.907128 1.665305e-40 1.154189e-35 3.297684e-37
36 8155422 8045919 NM_022826 MARCH7 link to infopage 0.906842 1.936964e-40 1.342471e-35 3.729085e-37
37 8155422 8022767 NM_014939 KIAA1012 link to infopage 0.905512 3.883625e-40 2.691663e-35 7.274764e-37
38 8161587 8045919 NM_022826 MARCH7 link to infopage 0.905480 3.947322e-40 2.735810e-35 7.199501e-37
39 8155422 8058127 NR_027856 CLK1 link to infopage 0.905370 4.180420e-40 2.897365e-35 7.429142e-37
40 8161587 7958216 NM_015275 KIAA1033 link to infopage 0.903556 1.060457e-39 7.349814e-35 1.837453e-36
41 8161537 7926836 NM_021252 RAB18 link to infopage 0.903236 1.246851e-39 8.641672e-35 2.107725e-36
42 8155636 7970907 NM_014887 N4BP2L2 link to infopage 0.902684 1.647936e-39 1.142152e-34 2.719409e-36
43 8155422 8138401 NM_015132 SNX13 link to infopage 0.902629 1.694037e-39 1.174103e-34 2.730472e-36
44 8155422 8115022 NM_001025105 CSNK1A1 link to infopage 0.901410 3.114701e-39 2.158737e-34 4.906220e-36
45 8155422 7968516 NM_015032 PDS5B link to infopage 0.901066 3.693781e-39 2.560086e-34 5.689079e-36
46 8155422 8069711 NM_015565 RNF160 link to infopage 0.900559 4.742635e-39 3.287025e-34 7.145707e-36
47 8161587 8058127 NR_027856 CLK1 link to infopage 0.899766 6.992267e-39 4.846200e-34 1.031106e-35
48 8155422 7958216 NM_015275 KIAA1033 link to infopage 0.899613 7.536309e-39 5.223265e-34 1.088180e-35
49 8155422 7935320 NM_020123 TM9SF3 link to infopage 0.899500 7.962668e-39 5.518766e-34 1.126279e-35
50 8161587 7970907 NM_014887 N4BP2L2 link to infopage 0.898548 1.262112e-38 8.747442e-34 1.749488e-35

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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