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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
3083 8094101 NM_001014448 CPZ link to infopage carboxypeptidase Z

Fetching correlation data, please wait...
Getting list of correlations for id 3083.
Getting list of p-values for id 3083.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.141 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8094101 8039273 NM_145057 CDC42EP5 link to infopage 0.799525 1.534987e-24 2.659672e-20 2.659672e-20
2 8094101 8137537 NM_001427 EN2 link to infopage 0.791020 1.032536e-23 1.789074e-19 8.945371e-20
3 8094101 7949080 NM_015080 NRXN2 link to infopage 0.790794 1.084908e-23 1.879820e-19 6.266066e-20
4 8094101 7938090 NM_176875 CCKBR link to infopage 0.785603 3.321867e-23 5.755799e-19 1.438950e-19
5 8094101 7952893 BC024764 IQSEC3 link to infopage 0.778378 1.499494e-22 2.598174e-18 5.196347e-19
6 8094101 7947363 NM_024424 WT1 link to infopage 0.777578 1.765765e-22 3.059542e-18 5.099236e-19
7 8094101 7927854 NM_012207 HNRNPH3 link to infopage -0.777013 1.980682e-22 3.431928e-18 4.902754e-19
8 8094101 7955112 NM_181788 H1FNT link to infopage 0.776424 2.232381e-22 3.868046e-18 4.835058e-19
9 8094101 7949015 NM_001144936 C11orf95 link to infopage 0.774543 3.261635e-22 5.651436e-18 6.279373e-19
10 8094101 8151125 ENST00000340798 link to infopage 0.773626 3.918814e-22 6.790129e-18 6.790129e-19
11 8094101 8061303 NM_002196 INSM1 link to infopage 0.771186 6.360839e-22 1.102143e-17 1.001948e-18
12 8094101 7896929 NM_022834 VWA1 link to infopage 0.770531 7.236142e-22 1.253806e-17 1.044839e-18
13 8094101 8115022 NM_001025105 CSNK1A1 link to infopage -0.769774 8.394928e-22 1.454589e-17 1.118915e-18
14 8094101 8091048 NR_023350 COPB2 link to infopage -0.769189 9.412792e-22 1.630955e-17 1.164968e-18
15 8094101 8074131 NM_001080420 SHANK3 link to infopage 0.768107 1.161988e-21 2.013376e-17 1.342251e-18
16 8094101 8126018 NM_007271 STK38 link to infopage -0.767164 1.394867e-21 2.416887e-17 1.510554e-18
17 8094101 8176149 NM_139250 CTAG1A link to infopage 0.767031 1.431339e-21 2.480081e-17 1.458871e-18
18 8094101 8170965 NM_139250 CTAG1A link to infopage 0.767031 1.431339e-21 2.480081e-17 1.377823e-18
19 8094101 8160472 NM_001004125 TUSC1 link to infopage 0.766483 1.591020e-21 2.756760e-17 1.450926e-18
20 8094101 7947928 NM_031909 C1QTNF4 link to infopage 0.765989 1.749402e-21 3.031189e-17 1.515595e-18
21 8094101 8093425 NM_000203 IDUA link to infopage 0.765526 1.911990e-21 3.312905e-17 1.577574e-18
22 8094101 7897179 NM_001126240 TP73 link to infopage 0.764827 2.185761e-21 3.787268e-17 1.721485e-18
23 8094101 7900931 NM_003780 B4GALT2 link to infopage 0.764743 2.221162e-21 3.848607e-17 1.673307e-18
24 8094101 8131056 NM_017781 CYP2W1 link to infopage 0.763845 2.635734e-21 4.566937e-17 1.902890e-18
25 8094101 8045455 NM_014607 UBXN4 link to infopage -0.762886 3.161464e-21 5.477868e-17 2.191147e-18
26 8094101 8071444 NM_144704 AIFM3 link to infopage 0.762400 3.465707e-21 6.005031e-17 2.309627e-18
27 8094101 7978718 NM_006364 SEC23A link to infopage -0.761185 4.356734e-21 7.548913e-17 2.795894e-18
28 8094101 8161265 NM_001007563 IGFBPL1 link to infopage 0.761035 4.481236e-21 7.764638e-17 2.773085e-18
29 8094101 7937228 NM_001012508 SPRN link to infopage 0.759569 5.893077e-21 1.021093e-16 3.521012e-18
30 8094101 8040479 NM_182828 GDF7 link to infopage 0.759320 6.173179e-21 1.069627e-16 3.565422e-18
31 8094101 8060660 NM_052970 HSPA12B link to infopage 0.758730 6.888082e-21 1.193498e-16 3.849994e-18
32 8094101 8049799 NM_001001891 ANO7 link to infopage 0.758283 7.481473e-21 1.296315e-16 4.050984e-18
33 8094101 7998910 NM_001103175 CCDC64B link to infopage 0.758061 7.796113e-21 1.350833e-16 4.093432e-18
34 8094101 8031489 NM_033113 ZNF628 link to infopage 0.756910 9.638073e-21 1.669989e-16 4.911732e-18
35 8094101 7912004 NM_207370 GPR153 link to infopage 0.756794 9.846477e-21 1.706099e-16 4.874569e-18
36 8094101 8137330 ENST00000356058 link to infopage 0.756460 1.046846e-20 1.813870e-16 5.038527e-18
37 8094101 7997765 NM_001127464 ZNF469 link to infopage 0.756118 1.114472e-20 1.931045e-16 5.219041e-18
38 8094101 8159142 NM_000093 COL5A1 link to infopage 0.756073 1.123732e-20 1.947090e-16 5.123921e-18
39 8094101 8073449 NM_014460 CSDC2 link to infopage 0.755111 1.339760e-20 2.321402e-16 5.952313e-18
40 8094101 8049942 NM_080741 NEU4 link to infopage 0.755026 1.360635e-20 2.357572e-16 5.893929e-18
41 8094101 8008201 NM_002507 NGFR link to infopage 0.754560 1.481052e-20 2.566220e-16 6.259072e-18
42 8094101 8023184 AY669508 SKOR2 link to infopage 0.754265 1.562505e-20 2.707352e-16 6.446077e-18
43 8094101 8054154 NM_207362 C2orf55 link to infopage 0.753401 1.827272e-20 3.166114e-16 7.363057e-18
44 8094101 8032214 NM_000156 GAMT link to infopage 0.753136 1.916612e-20 3.320914e-16 7.547532e-18
45 8094101 8042701 NM_004097 EMX1 link to infopage 0.752334 2.214767e-20 3.837527e-16 8.527838e-18
46 8094101 8166500 NM_003410 ZFX link to infopage -0.752098 2.310837e-20 4.003986e-16 8.704318e-18
47 8094101 7992758 NM_172229 KREMEN2 link to infopage 0.751481 2.581039e-20 4.472167e-16 9.515249e-18
48 8094101 7995193 NM_024742 ARMC5 link to infopage 0.751277 2.677033e-20 4.638496e-16 9.663532e-18
49 8094101 8076302 NM_138481 CHADL link to infopage 0.751093 2.766552e-20 4.793604e-16 9.782866e-18
50 8094101 8065327 NM_033176 NKX2-4 link to infopage 0.751076 2.775376e-20 4.808894e-16 9.617788e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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