[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5644	8049722	NM_005301	GPR35		G protein-coupled receptor 35

Fetching correlation data, please wait...
Getting list of correlations for id 5644.
Getting list of p-values for id 5644.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.133 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8049722	8049598	NM_194312	ESPNL	0.621427	1.510588e-12	2.617396e-8	2.617396e-8
2	8049722	7949796	NM_206997	GPR152	0.615867	2.704821e-12	4.686643e-8	2.343322e-8
3	8049722	8092468	NM_033259	CAMK2N2	0.614443	3.134316e-12	5.430830e-8	1.810277e-8
4	8049722	7951703	NM_000795	DRD2	0.613625	3.409945e-12	5.908412e-8	1.477103e-8
5	8049722	8153625	NM_017570	OPLAH	0.602619	1.036060e-11	1.795182e-7	3.590363e-8
6	8049722	8101000	ENST00000437185		0.600099	1.328273e-11	2.301498e-7	3.835831e-8
7	8049722	7898556	NM_001040125	PQLC2	0.599972	1.344890e-11	2.330291e-7	3.328987e-8
8	8049722	8078187	NM_015184	PLCL2	-0.599945	1.348525e-11	2.336589e-7	2.920736e-8
9	8049722	8038577	NM_001024656	ASPDH	0.599925	1.351160e-11	2.341155e-7	2.601283e-8
10	8049722	7992552	NM_022372	MLST8	0.597912	1.645140e-11	2.850534e-7	2.850534e-8
11	8049722	7993165			0.597427	1.724715e-11	2.988413e-7	2.716739e-8
12	8049722	7991877	NM_005632	SOLH	0.596109	1.959989e-11	3.396074e-7	2.830061e-8
13	8049722	7971039	NM_001014286	FAM48A	-0.596067	1.968041e-11	3.410025e-7	2.623096e-8
14	8049722	8024038	NM_001700	AZU1	0.595831	2.013456e-11	3.488716e-7	2.491940e-8
15	8049722	8031084	NM_031895	CACNG8	0.595639	2.051175e-11	3.554071e-7	2.369381e-8
16	8049722	8027439	NM_001136156	ZNF507	-0.594773	2.230043e-11	3.863995e-7	2.414997e-8
17	8049722	8123989	NM_005493	RANBP9	-0.594720	2.241383e-11	3.883644e-7	2.284497e-8
18	8049722	7991459	NM_020211	RGMA	0.593289	2.572135e-11	4.456738e-7	2.475966e-8
19	8049722	8128013	NM_020320	RARS2	-0.592523	2.767759e-11	4.795696e-7	2.524050e-8
20	8049722	8151625	AF495523	REXO1L1	0.589830	3.576836e-11	6.197583e-7	3.098792e-8
21	8049722	8151621	AF495523	REXO1L1	0.589830	3.576836e-11	6.197583e-7	2.951230e-8
22	8049722	8151613	AF495523	REXO1L1	0.589830	3.576836e-11	6.197583e-7	2.817083e-8
23	8049722	8151617	AF495523	REXO1L1	0.589830	3.576836e-11	6.197583e-7	2.694601e-8
24	8049722	8151605	AF495523	REXO1L1	0.589830	3.576836e-11	6.197583e-7	2.582326e-8
25	8049722	8109697	NM_004060	CCNG1	-0.589808	3.584159e-11	6.210272e-7	2.484109e-8
26	8049722	8116582	NM_001452	FOXF2	0.589515	3.685197e-11	6.385340e-7	2.455900e-8
27	8049722	8160823	NM_147164	CNTFR	0.589357	3.740796e-11	6.481677e-7	2.400621e-8
28	8049722	8109981	NM_003862	FGF18	0.587351	4.519486e-11	7.830914e-7	2.796755e-8
29	8049722	8011188	ENST00000330676		0.586140	5.063454e-11	8.773447e-7	3.025326e-8
30	8049722	8109597	NM_145049	UBLCP1	-0.584767	5.755996e-11	9.973414e-7	3.324471e-8
31	8049722	8074131	NM_001080420	SHANK3	0.582112	7.362913e-11	1.275772e-6	4.115394e-8
32	8049722	8075211	NM_001007279	RASL10A	0.582041	7.411168e-11	1.284133e-6	4.012916e-8
33	8049722	8160238	NM_033222	PSIP1	-0.581550	7.754366e-11	1.343599e-6	4.071512e-8
34	8049722	7947434	NM_033406	FBXO3	-0.581385	7.872942e-11	1.364145e-6	4.012190e-8
35	8049722	8013259	ENST00000300983		0.581277	7.951847e-11	1.377817e-6	3.936619e-8
36	8049722	7918416	NM_006492	ALX3	0.580486	8.551103e-11	1.481650e-6	4.115694e-8
37	8049722	8104350	NM_015325	KIAA0947	-0.580370	8.642883e-11	1.497552e-6	4.047439e-8
38	8049722	8153346	NM_023946	LYNX1	0.579440	9.411644e-11	1.630756e-6	4.291462e-8
39	8049722	7992775	NM_152341	PAQR4	0.579248	9.578871e-11	1.659731e-6	4.255721e-8
40	8049722	8134180	NM_019004	ANKIB1	-0.579028	9.772713e-11	1.693318e-6	4.233295e-8
41	8049722	7940020	ENST00000411066		0.578646	1.011956e-10	1.753416e-6	4.276625e-8
42	8049722	7961865	NM_033360	KRAS	-0.577972	1.076076e-10	1.864518e-6	4.439327e-8
43	8049722	7904879	ENST00000364272		0.577948	1.078416e-10	1.868571e-6	4.345513e-8
44	8049722	8047736			0.577941	1.079168e-10	1.869874e-6	4.249714e-8
45	8049722	7910503	NM_001004342	TRIM67	0.577803	1.092813e-10	1.893518e-6	4.207817e-8
46	8049722	8167407	NM_181532	ERAS	0.577089	1.165987e-10	2.020305e-6	4.391968e-8
47	8049722	8144044	AK124285	FLJ42291	0.576943	1.181627e-10	2.047405e-6	4.356181e-8
48	8049722	7954613	NM_018318	CCDC91	-0.576701	1.207778e-10	2.092717e-6	4.359827e-8
49	8049722	8091032	NM_023067	FOXL2	0.576345	1.247344e-10	2.161274e-6	4.410763e-8
50	8049722	7903239	NM_000028	AGL	-0.576099	1.275448e-10	2.209968e-6	4.419936e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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