[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id Label1 AccNum GeneSym Info Gene Name
5928 8003583 NM_007317 KIF22 link to infopage kinesin family member 22
6485 7994620 NM_007317 KIF22 link to infopage kinesin family member 22

Fetching correlation data, please wait...
Getting list of correlations for id 5928.
Getting list of p-values for id 5928.
1 of 2 done.
Getting list of correlations for id 6485.
Getting list of p-values for id 6485.
2 of 2 done.
Calculating corrections for multiple testing (n=34654), please wait...
Done; whole program took 0.183 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7994620 8003583 NM_007317 KIF22 link to infopage 0.991329 1.301332e-92 4.509634e-88 4.509634e-88
2 8003583 7994620 NM_007317 KIF22 link to infopage 0.991329 1.301332e-92 4.509634e-88 2.254817e-88
3 8003583 8025788 NM_001128849 SMARCA4 link to infopage 0.615173 2.906464e-12 1.007206e-7 3.357354e-8
4 8003583 8036525 NM_001042600 MAP4K1 link to infopage 0.611096 4.418797e-12 1.531290e-7 3.828224e-8
5 8003583 7994541 NM_014387 LAT link to infopage 0.607620 6.285819e-12 2.178288e-7 4.356575e-8
6 7994620 8025788 NM_001128849 SMARCA4 link to infopage 0.607090 6.630306e-12 2.297666e-7 3.829444e-8
7 7994620 7994541 NM_014387 LAT link to infopage 0.604980 8.192398e-12 2.838994e-7 4.055705e-8
8 7994620 8036525 NM_001042600 MAP4K1 link to infopage 0.602553 1.042775e-11 3.613632e-7 4.517040e-8
9 8003583 8032576 NM_198969 AES link to infopage 0.602457 1.052802e-11 3.648382e-7 4.053757e-8
10 8003583 8163525 NR_027261 POLE3 link to infopage 0.594871 2.209149e-11 7.655585e-7 7.655585e-8
11 7994620 8032576 NM_198969 AES link to infopage 0.594751 2.234762e-11 7.744343e-7 7.040312e-8
12 8003583 7992828 NM_001012631 IL32 link to infopage 0.587798 4.333642e-11 1.501780e-6 1.251484e-7
13 7994620 7941136 NM_013265 C11orf2 link to infopage 0.587387 4.504445e-11 1.560970e-6 1.200746e-7
14 8003583 7967202 NM_019034 RHOF link to infopage 0.587284 4.547992e-11 1.576061e-6 1.125758e-7
15 7994620 8163525 NR_027261 POLE3 link to infopage 0.586449 4.918840e-11 1.704575e-6 1.136383e-7
16 7994620 7992021 NM_005861 STUB1 link to infopage 0.581874 7.525827e-11 2.608000e-6 1.630000e-7
17 8003583 7992021 NM_005861 STUB1 link to infopage 0.575682 1.324428e-10 4.589673e-6 2.699807e-7
18 8003583 7941136 NM_013265 C11orf2 link to infopage 0.575667 1.326305e-10 4.596176e-6 2.553431e-7
19 7994620 7992828 NM_001012631 IL32 link to infopage 0.575415 1.356778e-10 4.701780e-6 2.474621e-7
20 7994620 8001924 NR_024525 FAM96B link to infopage 0.574644 1.454414e-10 5.040126e-6 2.520063e-7
21 8003583 7951896 NM_004716 PCSK7 link to infopage 0.574086 1.529237e-10 5.299417e-6 2.523532e-7
22 8003583 7906185 NM_144772 APOA1BP link to infopage 0.573398 1.626701e-10 5.637169e-6 2.562350e-7
23 8003583 7937802 NM_004356 CD81 link to infopage 0.570557 2.095909e-10 7.263163e-6 3.157897e-7
24 7994620 7967202 NM_019034 RHOF link to infopage 0.570421 2.121400e-10 7.351498e-6 3.063124e-7
25 8003583 8000869 NM_052838 SEPT1 link to infopage 0.569256 2.351988e-10 8.150578e-6 3.260231e-7
26 7994620 7951896 NM_004716 PCSK7 link to infopage 0.568663 2.478551e-10 8.589170e-6 3.303527e-7
27 8003583 8001924 NR_024525 FAM96B link to infopage 0.565144 3.374817e-10 1.169509e-5 4.331515e-7
28 8003583 7899753 NM_005356 LCK link to infopage 0.565066 3.397795e-10 1.177472e-5 4.205257e-7
29 8003583 8034806 NM_005804 DDX39 link to infopage 0.564417 3.595365e-10 1.245938e-5 4.296337e-7
30 7994620 7964522 NM_000075 CDK4 link to infopage 0.563832 3.782754e-10 1.310875e-5 4.369585e-7
31 8003583 8079772 NM_001640 APEH link to infopage 0.561660 4.564804e-10 1.581887e-5 5.102862e-7
32 7994620 8029969 NM_003009 SEPW1 link to infopage 0.558642 5.913221e-10 2.049167e-5 6.403648e-7
33 7994620 8000869 NM_052838 SEPT1 link to infopage 0.558048 6.220096e-10 2.155512e-5 6.531855e-7
34 7994620 8019376 NM_022156 DUS1L link to infopage 0.557862 6.319456e-10 2.189944e-5 6.441012e-7
35 8003583 8005171 NM_016113 TRPV2 link to infopage 0.557578 6.474170e-10 2.243559e-5 6.410168e-7
36 7994620 7906185 NM_144772 APOA1BP link to infopage 0.556732 6.956398e-10 2.410670e-5 6.696306e-7
37 7994620 7937802 NM_004356 CD81 link to infopage 0.556341 7.190778e-10 2.491892e-5 6.734844e-7
38 8003583 8119648 NM_057161 KLHDC3 link to infopage 0.555884 7.474101e-10 2.590075e-5 6.815987e-7
39 8003583 7974249 NM_001663 ARF6 link to infopage 0.555067 8.007899e-10 2.775057e-5 7.115532e-7
40 7994620 8079772 NM_001640 APEH link to infopage 0.552895 9.611621e-10 3.330811e-5 8.327027e-7
41 7994620 8034806 NM_005804 DDX39 link to infopage 0.552873 9.629516e-10 3.337012e-5 8.139055e-7
42 8003583 8043725 NM_001079 ZAP70 link to infopage 0.552315 1.008961e-9 3.496452e-5 8.324886e-7
43 8003583 7941879 NM_198517 TBC1D10C link to infopage 0.552080 1.028909e-9 3.565580e-5 8.292046e-7
44 7994620 8010747 NM_212492 GPS1 link to infopage 0.551515 1.078627e-9 3.737874e-5 8.495168e-7
45 7994620 7974249 NM_001663 ARF6 link to infopage 0.551407 1.088362e-9 3.771610e-5 8.381355e-7
46 8003583 7945349 NM_016526 BET1L link to infopage 0.550111 1.212172e-9 4.200660e-5 9.131869e-7
47 7994620 7941879 NM_198517 TBC1D10C link to infopage 0.550046 1.218726e-9 4.223372e-5 8.985899e-7
48 7994620 7899753 NM_005356 LCK link to infopage 0.549866 1.237061e-9 4.286912e-5 8.931067e-7
49 8003583 8010747 NM_212492 GPS1 link to infopage 0.548696 1.362833e-9 4.722763e-5 9.638291e-7
50 8003583 8019376 NM_022156 DUS1L link to infopage 0.548069 1.435085e-9 4.973143e-5 9.946286e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!