[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
User requested variable id 6485.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6485	7994620	NM_007317	KIF22		kinesin family member 22

Fetching correlation data, please wait...
Getting list of correlations for id 6485.
Getting list of p-values for id 6485.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.070 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7994620	8003583	NM_007317	KIF22	0.991329	1.301332e-92	2.254817e-88	2.254817e-88
2	7994620	8025788	NM_001128849	SMARCA4	0.607090	6.630306e-12	1.148833e-7	5.744165e-8
3	7994620	7994541	NM_014387	LAT	0.604980	8.192398e-12	1.419497e-7	4.731656e-8
4	7994620	8036525	NM_001042600	MAP4K1	0.602553	1.042775e-11	1.806816e-7	4.517040e-8
5	7994620	8032576	NM_198969	AES	0.594751	2.234762e-11	3.872172e-7	7.744343e-8
6	7994620	7941136	NM_013265	C11orf2	0.587387	4.504445e-11	7.804852e-7	1.300809e-7
7	7994620	8163525	NR_027261	POLE3	0.586449	4.918840e-11	8.522875e-7	1.217554e-7
8	7994620	7992021	NM_005861	STUB1	0.581874	7.525827e-11	1.304000e-6	1.630000e-7
9	7994620	7992828	NM_001012631	IL32	0.575415	1.356778e-10	2.350890e-6	2.612100e-7
10	7994620	8001924	NR_024525	FAM96B	0.574644	1.454414e-10	2.520063e-6	2.520063e-7
11	7994620	7967202	NM_019034	RHOF	0.570421	2.121400e-10	3.675749e-6	3.341590e-7
12	7994620	7951896	NM_004716	PCSK7	0.568663	2.478551e-10	4.294585e-6	3.578821e-7
13	7994620	7964522	NM_000075	CDK4	0.563832	3.782754e-10	6.554377e-6	5.041829e-7
14	7994620	8029969	NM_003009	SEPW1	0.558642	5.913221e-10	1.024584e-5	7.318455e-7
15	7994620	8000869	NM_052838	SEPT1	0.558048	6.220096e-10	1.077756e-5	7.185040e-7
16	7994620	8019376	NM_022156	DUS1L	0.557862	6.319456e-10	1.094972e-5	6.843576e-7
17	7994620	7906185	NM_144772	APOA1BP	0.556732	6.956398e-10	1.205335e-5	7.090207e-7
18	7994620	7937802	NM_004356	CD81	0.556341	7.190778e-10	1.245946e-5	6.921923e-7
19	7994620	8079772	NM_001640	APEH	0.552895	9.611621e-10	1.665405e-5	8.765292e-7
20	7994620	8034806	NM_005804	DDX39	0.552873	9.629516e-10	1.668506e-5	8.342531e-7
21	7994620	8010747	NM_212492	GPS1	0.551515	1.078627e-9	1.868937e-5	8.899700e-7
22	7994620	7974249	NM_001663	ARF6	0.551407	1.088362e-9	1.885805e-5	8.571840e-7
23	7994620	7941879	NM_198517	TBC1D10C	0.550046	1.218726e-9	2.111686e-5	9.181245e-7
24	7994620	7899753	NM_005356	LCK	0.549866	1.237061e-9	2.143456e-5	8.931067e-7
25	7994620	8158568	NM_006676	USP20	0.545920	1.712042e-9	2.966456e-5	1.186582e-6
26	7994620	8043725	NM_001079	ZAP70	0.545856	1.721089e-9	2.982131e-5	1.146973e-6
27	7994620	8119648	NM_057161	KLHDC3	0.543305	2.118727e-9	3.671118e-5	1.359673e-6
28	7994620	7945349	NM_016526	BET1L	0.542876	2.193700e-9	3.801023e-5	1.357508e-6
29	7994620	8132964	NM_015411	SUMF2	0.541525	2.446869e-9	4.239690e-5	1.461962e-6
30	7994620	8005171	NM_016113	TRPV2	0.541396	2.472472e-9	4.284052e-5	1.428017e-6
31	7994620	7929243	NM_017838	NHP2	0.539620	2.851932e-9	4.941543e-5	1.594046e-6
32	7994620	8126474	NM_014623	MEA1	0.533717	4.556772e-9	7.895519e-5	2.467350e-6
33	7994620	8145085	NM_001722	POLR3D	0.533239	4.731176e-9	8.197709e-5	2.484154e-6
34	7994620	7949792	NM_005608	PTPRCAP	0.531553	5.398549e-9	9.354065e-5	2.751196e-6
35	7994620	8024282	NM_170711	DAZAP1	0.531507	5.418340e-9	9.388358e-5	2.682388e-6
36	7994620	8053584	NR_027353	CD8A	0.530088	6.051289e-9	1.048507e-4	2.912519e-6
37	7994620	8076137	NM_015374	SUN2	0.529580	6.294992e-9	1.090733e-4	2.947928e-6
38	7994620	7952056	NM_000732	CD3D	0.528853	6.659473e-9	1.153887e-4	3.036545e-6
39	7994620	7996919	NM_013245	VPS4A	0.528307	6.946724e-9	1.203659e-4	3.086305e-6
40	7994620	7952145	NM_006389	HYOU1	0.528082	7.068493e-9	1.224758e-4	3.061894e-6
41	7994620	7900962	NM_019100	DMAP1	0.527061	7.647017e-9	1.324999e-4	3.231704e-6
42	7994620	8110803	NM_030782	CLPTM1L	0.526857	7.767923e-9	1.345948e-4	3.204638e-6
43	7994620	8080084	NM_006010	MANF	0.525348	8.721381e-9	1.511154e-4	3.514311e-6
44	7994620	7956930	NM_006482	DYRK2	0.525324	8.737600e-9	1.513964e-4	3.440827e-6
45	7994620	7986323	NM_015710	GLTSCR2	0.523958	9.697754e-9	1.680330e-4	3.734066e-6
46	7994620	8175900	NM_001666	ARHGAP4	0.523878	9.757418e-9	1.690668e-4	3.675365e-6
47	7994620	8060539	NM_002836	PTPRA	0.522653	1.070938e-8	1.855614e-4	3.948115e-6
48	7994620	7911359	NM_015658	NOC2L	0.522267	1.102747e-8	1.910730e-4	3.980688e-6
49	7994620	7994603	NM_001030288	SPN	0.518113	1.507434e-8	2.611930e-4	5.330470e-6
50	7994620	7991374	NM_002168	IDH2	0.515573	1.821345e-8	3.155845e-4	6.311690e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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