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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
14218 8110803 NM_030782 CLPTM1L link to infopage CLPTM1-like

Fetching correlation data, please wait...
Getting list of correlations for id 14218.
Getting list of p-values for id 14218.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.544 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8110803 7913256 NM_005216 DDOST link to infopage 0.882164 1.833728e-35 3.177301e-31 3.177301e-31
2 8110803 8040908 NM_014748 SNX17 link to infopage 0.844451 1.095347e-29 1.897908e-25 9.489538e-26
3 8110803 8119648 NM_057161 KLHDC3 link to infopage 0.830947 5.547305e-28 9.611815e-24 3.203938e-24
4 8110803 7990211 NM_000520 HEXA link to infopage 0.829388 8.531977e-28 1.478336e-23 3.695839e-24
5 8110803 8026106 NM_004343 CALR link to infopage 0.829089 9.261855e-28 1.604802e-23 3.209603e-24
6 8110803 7978208 NM_012461 TINF2 link to infopage 0.828186 1.185938e-27 2.054875e-23 3.424792e-24
7 8110803 8013696 NM_014680 KIAA0100 link to infopage 0.827254 1.527783e-27 2.647190e-23 3.781700e-24
8 8110803 8006392 NM_002815 PSMD11 link to infopage 0.820989 8.078109e-27 1.399694e-22 1.749617e-23
9 8110803 8007715 NM_021079 NMT1 link to infopage 0.816594 2.500071e-26 4.331873e-22 4.813192e-23
10 8110803 8133434 NM_022170 EIF4H link to infopage 0.815962 2.934216e-26 5.084116e-22 5.084116e-23
11 8110803 8027621 NM_000175 GPI link to infopage 0.815706 3.130149e-26 5.423608e-22 4.930553e-23
12 8110803 7904974 NR_003242 C1orf152 link to infopage 0.815681 3.149738e-26 5.457551e-22 4.547959e-23
13 8110803 7928369 NM_004922 SEC24C link to infopage 0.805688 3.638305e-25 6.304091e-21 4.849301e-22
14 8110803 8164644 NM_033387 FAM78A link to infopage 0.802321 8.037969e-25 1.392739e-20 9.948135e-22
15 8110803 8075924 NM_002405 MFNG link to infopage 0.799127 1.681354e-24 2.913282e-20 1.942188e-21
16 8110803 7958152 NM_002629 PGAM1 link to infopage 0.798365 2.001093e-24 3.467294e-20 2.167059e-21
17 8110803 8073192 NM_006003 UQCRFS1 link to infopage 0.795970 3.442289e-24 5.964454e-20 3.508502e-21
18 8110803 7948744 NM_198335 GANAB link to infopage 0.795638 3.709034e-24 6.426642e-20 3.570357e-21
19 8110803 7929624 NM_002629 PGAM1 link to infopage 0.794657 4.620365e-24 8.005706e-20 4.213530e-21
20 8110803 7948696 NM_004739 MTA2 link to infopage 0.792708 7.123825e-24 1.234345e-19 6.171726e-21
21 8110803 8138773 NM_022170 EIF4H link to infopage 0.790721 1.102209e-23 1.909797e-19 9.094273e-21
22 8110803 7965480 NM_002629 PGAM1 link to infopage 0.789082 1.574749e-23 2.728567e-19 1.240258e-20
23 8110803 8125850 NM_024294 C6orf106 link to infopage 0.789036 1.590318e-23 2.755543e-19 1.198062e-20
24 8110803 8099340 NM_017491 WDR1 link to infopage 0.788174 1.916008e-23 3.319867e-19 1.383278e-20
25 8110803 8066716 NM_133171 ELMO2 link to infopage 0.786864 2.538532e-23 4.398514e-19 1.759406e-20
26 8110803 8032730 NM_001961 EEF2 link to infopage 0.784443 4.248503e-23 7.361381e-19 2.831301e-20
27 8110803 7914563 NM_003680 YARS link to infopage 0.782450 6.458926e-23 1.119138e-18 4.144956e-20
28 8110803 7920515 NM_017582 UBE2Q1 link to infopage 0.782398 6.528335e-23 1.131165e-18 4.039874e-20
29 8110803 8143781 NM_024711 GIMAP6 link to infopage 0.781988 7.111752e-23 1.232253e-18 4.249149e-20
30 8110803 8019250 NM_000918 P4HB link to infopage 0.780575 9.539259e-23 1.652867e-18 5.509558e-20
31 8110803 7989619 NM_000942 PPIB link to infopage 0.780105 1.051394e-22 1.821750e-18 5.876613e-20
32 8110803 8173729 NM_001029891 PGAM4 link to infopage 0.779888 1.099445e-22 1.905009e-18 5.953154e-20
33 8110803 8176282 NM_001029891 PGAM4 link to infopage 0.779888 1.099445e-22 1.905009e-18 5.772755e-20
34 8110803 8082478 NM_016128 COPG link to infopage 0.779805 1.118565e-22 1.938138e-18 5.700406e-20
35 8110803 7958414 NM_014301 ISCU link to infopage 0.779360 1.225729e-22 2.123820e-18 6.068058e-20
36 8110803 8104166 NM_004168 SDHA link to infopage 0.775351 2.772849e-22 4.804515e-18 1.334587e-19
37 8110803 8062349 NM_002951 RPN2 link to infopage 0.774511 3.282628e-22 5.687810e-18 1.537246e-19
38 8110803 7948192 NM_003146 SSRP1 link to infopage 0.774277 3.440535e-22 5.961416e-18 1.568794e-19
39 8110803 8163784 NM_012164 FBXW2 link to infopage 0.773229 4.242349e-22 7.350718e-18 1.884800e-19
40 8110803 8068974 NM_003274 TRAPPC10 link to infopage 0.772504 4.899978e-22 8.490193e-18 2.122548e-19
41 8110803 7963935 NM_032364 DNAJC14 link to infopage 0.772357 5.045079e-22 8.741608e-18 2.132099e-19
42 8110803 7941214 NM_002689 POLA2 link to infopage 0.772278 5.125048e-22 8.880171e-18 2.114326e-19
43 8110803 8053890 NM_020151 STARD7 link to infopage 0.771450 6.037881e-22 1.046184e-17 2.432985e-19
44 8110803 7999233 NM_032569 GLYR1 link to infopage 0.771038 6.549427e-22 1.134819e-17 2.579135e-19
45 8110803 8077550 NM_001077525 MTMR14 link to infopage 0.770050 7.953100e-22 1.378034e-17 3.062297e-19
46 8110803 8062174 NM_198398 ERGIC3 link to infopage 0.768741 1.027209e-21 1.779844e-17 3.869227e-19
47 8110803 7972946 NM_007368 RASA3 link to infopage 0.767782 1.237673e-21 2.144516e-17 4.562801e-19
48 8110803 8123609 NM_004155 SERPINB9 link to infopage 0.766273 1.656445e-21 2.870123e-17 5.979422e-19
49 8110803 8136849 NM_001143679 GSTK1 link to infopage 0.765490 1.925407e-21 3.336152e-17 6.808473e-19
50 8110803 7998033 NM_014972 TCF25 link to infopage 0.765025 2.104873e-21 3.647114e-17 7.294227e-19

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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