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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 15449.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
15449 8019250 NM_000918 P4HB link to infopage prolyl 4-hydroxylase, beta polypeptide

Fetching correlation data, please wait...
Getting list of correlations for id 15449.
Getting list of p-values for id 15449.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.106 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8019250 8019762 link to infopage 0.897177 2.430546e-38 4.211406e-34 4.211406e-34
2 8019250 8164883 NM_033161 SURF4 link to infopage 0.830609 6.091549e-28 1.055483e-23 5.277414e-24
3 8019250 8015460 NM_001096 ACLY link to infopage 0.825300 2.586701e-27 4.481977e-23 1.493992e-23
4 8019250 8160914 NM_007126 VCP link to infopage 0.823188 4.536253e-27 7.859965e-23 1.964991e-23
5 8019250 7904974 NR_003242 C1orf152 link to infopage 0.822365 5.635311e-27 9.764303e-23 1.952861e-23
6 8019250 7920515 NM_017582 UBE2Q1 link to infopage 0.821259 7.527652e-27 1.304316e-22 2.173860e-23
7 8019250 8099340 NM_017491 WDR1 link to infopage 0.820346 9.547954e-27 1.654374e-22 2.363391e-23
8 8019250 8053890 NM_020151 STARD7 link to infopage 0.818422 1.568661e-26 2.718019e-22 3.397524e-23
9 8019250 7949496 NM_005507 CFL1 link to infopage 0.818156 1.679297e-26 2.909719e-22 3.233021e-23
10 8019250 8011759 NM_005022 PFN1 link to infopage 0.816761 2.396339e-26 4.152137e-22 4.152137e-23
11 8019250 7948192 NM_003146 SSRP1 link to infopage 0.816718 2.422946e-26 4.198238e-22 3.816580e-23
12 8019250 7952557 NM_003139 SRPR link to infopage 0.811509 8.903545e-26 1.542717e-21 1.285598e-22
13 8019250 7948696 NM_004739 MTA2 link to infopage 0.809030 1.631263e-25 2.826489e-21 2.174222e-22
14 8019250 8172876 NM_006306 SMC1A link to infopage 0.808915 1.677112e-25 2.905932e-21 2.075666e-22
15 8019250 7993371 NM_001004067 NOMO3 link to infopage 0.808646 1.789979e-25 3.101496e-21 2.067664e-22
16 8019250 7993511 NM_001004067 NOMO3 link to infopage 0.808646 1.789979e-25 3.101496e-21 1.938435e-22
17 8019250 7999791 NM_001004067 NOMO3 link to infopage 0.808646 1.789979e-25 3.101496e-21 1.824409e-22
18 8019250 8024019 NM_002819 PTBP1 link to infopage 0.808498 1.855357e-25 3.214776e-21 1.785987e-22
19 8019250 8090490 NM_002950 RPN1 link to infopage 0.808183 2.002006e-25 3.468876e-21 1.825724e-22
20 8019250 8139433 NM_033054 MYO1G link to infopage 0.807582 2.313913e-25 4.009317e-21 2.004658e-22
21 8019250 7990151 NM_182470 PKM2 link to infopage 0.802645 7.453861e-25 1.291530e-20 6.150145e-22
22 8019250 7898328 NM_001114600 C1orf144 link to infopage 0.802175 8.316168e-25 1.440942e-20 6.549738e-22
23 8019250 8034420 NM_000528 MAN2B1 link to infopage 0.801867 8.934273e-25 1.548041e-20 6.730615e-22
24 8019250 7933164 NM_004966 HNRNPF link to infopage 0.801442 9.862162e-25 1.708817e-20 7.120070e-22
25 8019250 7976876 NM_001376 DYNC1H1 link to infopage 0.799711 1.470606e-24 2.548118e-20 1.019247e-21
26 8019250 8132592 NM_002541 OGDH link to infopage 0.798196 2.079590e-24 3.603305e-20 1.385887e-21
27 8019250 7958644 NM_170665 ATP2A2 link to infopage 0.797559 2.404180e-24 4.165722e-20 1.542860e-21
28 8019250 8026106 NM_004343 CALR link to infopage 0.797367 2.511144e-24 4.351059e-20 1.553950e-21
29 8019250 8084439 NM_182917 EIF4G1 link to infopage 0.796812 2.847236e-24 4.933406e-20 1.701175e-21
30 8019250 8033479 NM_001419 ELAVL1 link to infopage 0.795310 3.992422e-24 6.917670e-20 2.305890e-21
31 8019250 7965480 NM_002629 PGAM1 link to infopage 0.795264 4.033890e-24 6.989521e-20 2.254684e-21
32 8019250 8037005 NM_000660 TGFB1 link to infopage 0.794997 4.281833e-24 7.419131e-20 2.318479e-21
33 8019250 8009164 NM_005828 DCAF7 link to infopage 0.789858 1.330572e-23 2.305483e-19 6.986311e-21
34 8019250 8176026 NM_001456 FLNA link to infopage 0.789143 1.553922e-23 2.692480e-19 7.919059e-21
35 8019250 7970287 NM_005561 LAMP1 link to infopage 0.788807 1.671226e-23 2.895733e-19 8.273524e-21
36 8019250 8029029 NM_007040 HNRNPUL1 link to infopage 0.785747 3.222137e-23 5.582996e-19 1.550832e-20
37 8019250 7964466 NM_006400 DCTN2 link to infopage 0.785378 3.484717e-23 6.037969e-19 1.631884e-20
38 8019250 8066668 NM_020967 NCOA5 link to infopage 0.784776 3.959494e-23 6.860615e-19 1.805425e-20
39 8019250 8025697 NM_012218 ILF3 link to infopage 0.782636 6.211164e-23 1.076208e-18 2.759509e-20
40 8019250 8006392 NM_002815 PSMD11 link to infopage 0.781320 8.173261e-23 1.416181e-18 3.540452e-20
41 8019250 7975747 NM_001933 DLST link to infopage 0.781227 8.333350e-23 1.443920e-18 3.521755e-20
42 8019250 8110803 NM_030782 CLPTM1L link to infopage 0.780575 9.539259e-23 1.652867e-18 3.935399e-20
43 8019250 8173729 NM_001029891 PGAM4 link to infopage 0.777559 1.772615e-22 3.071410e-18 7.142813e-20
44 8019250 8176282 NM_001029891 PGAM4 link to infopage 0.777559 1.772615e-22 3.071410e-18 6.980476e-20
45 8019250 8138773 NM_022170 EIF4H link to infopage 0.777175 1.916694e-22 3.321055e-18 7.380123e-20
46 8019250 8115168 NM_018047 RBM22 link to infopage 0.774194 3.498176e-22 6.061290e-18 1.317672e-19
47 8019250 8019211 NM_017921 NPLOC4 link to infopage 0.773792 3.791200e-22 6.569013e-18 1.397662e-19
48 8019250 8086028 NM_000404 GLB1 link to infopage 0.773490 4.026679e-22 6.977026e-18 1.453547e-19
49 8019250 8073192 NM_006003 UQCRFS1 link to infopage 0.773223 4.246791e-22 7.358414e-18 1.501717e-19
50 8019250 8076465 NM_032311 POLDIP3 link to infopage 0.773112 4.341985e-22 7.523357e-18 1.504671e-19

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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