[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
12367	8084439	NM_182917	EIF4G1		eukaryotic translation initiation factor 4 gamma, 1

Fetching correlation data, please wait...
Getting list of correlations for id 12367.
Getting list of p-values for id 12367.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.160 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8084439	8172914	NM_031407	HUWE1	0.839106	5.407314e-29	9.369254e-25	9.369254e-25
2	8084439	8093685	NM_002111	HTT	0.830593	6.119009e-28	1.060241e-23	5.301203e-24
3	8084439	8009164	NM_005828	DCAF7	0.823930	3.726652e-27	6.457171e-23	2.152390e-23
4	8084439	7930031	NM_004193	GBF1	0.819828	1.091892e-26	1.891921e-22	4.729804e-23
5	8084439	8029029	NM_007040	HNRNPUL1	0.816270	2.714270e-26	4.703015e-22	9.406030e-23
6	8084439	8133275	NM_172020	POM121	0.815483	3.310969e-26	5.736917e-22	9.561528e-23
7	8084439	8013696	NM_014680	KIAA0100	0.814292	4.464708e-26	7.735999e-22	1.105143e-22
8	8084439	7972946	NM_007368	RASA3	0.809239	1.550592e-25	2.686712e-21	3.358389e-22
9	8084439	8176026	NM_001456	FLNA	0.805662	3.660769e-25	6.343015e-21	7.047795e-22
10	8084439	7939767	NM_003682	MADD	0.804628	4.678049e-25	8.105656e-21	8.105656e-22
11	8084439	8132592	NM_002541	OGDH	0.801948	8.767808e-25	1.519198e-20	1.381089e-21
12	8084439	7990151	NM_182470	PKM2	0.798566	1.911324e-24	3.311751e-20	2.759792e-21
13	8084439	8019250	NM_000918	P4HB	0.796812	2.847236e-24	4.933406e-20	3.794928e-21
14	8084439	7904974	NR_003242	C1orf152	0.794557	4.725061e-24	8.187113e-20	5.847938e-21
15	8084439	7998033	NM_014972	TCF25	0.789405	1.468203e-23	2.543956e-19	1.695971e-20
16	8084439	8080100	NM_015106	RAD54L2	0.788451	1.804687e-23	3.126980e-19	1.954363e-20
17	8084439	7912412	NM_004958	MTOR	0.787996	1.990891e-23	3.449617e-19	2.029187e-20
18	8084439	7948696	NM_004739	MTA2	0.787612	2.162320e-23	3.746651e-19	2.081473e-20
19	8084439	8140297	NM_001099415	POM121C	0.787573	2.180611e-23	3.778345e-19	1.988603e-20
20	8084439	8015460	NM_001096	ACLY	0.787125	2.400647e-23	4.159600e-19	2.079800e-20
21	8084439	8032418	NM_003938	AP3D1	0.785898	3.119926e-23	5.405896e-19	2.574236e-20
22	8084439	8012257	NM_000546	TP53	0.784435	4.255203e-23	7.372991e-19	3.351359e-20
23	8084439	8005903	NM_003170	SUPT6H	0.783585	5.090226e-23	8.819834e-19	3.834710e-20
24	8084439	8024019	NM_002819	PTBP1	0.783479	5.204721e-23	9.018219e-19	3.757591e-20
25	8084439	8037005	NM_000660	TGFB1	0.782599	6.259685e-23	1.084616e-18	4.338462e-20
26	8084439	7976876	NM_001376	DYNC1H1	0.781016	8.705922e-23	1.508475e-18	5.801827e-20
27	8084439	8085431	NM_024923	NUP210	0.779666	1.151037e-22	1.994401e-18	7.386672e-20
28	8084439	8027621	NM_000175	GPI	0.778717	1.398988e-22	2.424026e-18	8.657237e-20
29	8084439	7948192	NM_003146	SSRP1	0.777726	1.713021e-22	2.968151e-18	1.023500e-19
30	8084439	8164644	NM_033387	FAM78A	0.777095	1.948129e-22	3.375523e-18	1.125174e-19
31	8084439	8076465	NM_032311	POLDIP3	0.774835	3.076089e-22	5.329940e-18	1.719335e-19
32	8084439	8025697	NM_012218	ILF3	0.773045	4.400165e-22	7.624166e-18	2.382552e-19
33	8084439	8115783	NM_005990	STK10	0.772244	5.159712e-22	8.940234e-18	2.709162e-19
34	8084439	7994826	NM_002209	ITGAL	0.771065	6.514400e-22	1.128750e-17	3.319853e-19
35	8084439	8026106	NM_004343	CALR	0.766854	1.481023e-21	2.566169e-17	7.331913e-19
36	8084439	7952557	NM_003139	SRPR	0.766345	1.633820e-21	2.830919e-17	7.863665e-19
37	8084439	7948744	NM_198335	GANAB	0.766136	1.700752e-21	2.946892e-17	7.964573e-19
38	8084439	8139433	NM_033054	MYO1G	0.765560	1.899586e-21	3.291413e-17	8.661612e-19
39	8084439	8013486	NM_015276	USP22	0.763702	2.708231e-21	4.692552e-17	1.203219e-18
40	8084439	7944152	NM_001558	IL10RA	0.763020	3.082471e-21	5.340998e-17	1.335250e-18
41	8084439	8158829	NM_013318	BAT2L1	0.761336	4.235065e-21	7.338097e-17	1.789780e-18
42	8084439	8018324	NM_138619	GGA3	0.760422	5.026453e-21	8.709335e-17	2.073651e-18
43	8084439	7928369	NM_004922	SEC24C	0.759688	5.764132e-21	9.987512e-17	2.322677e-18
44	8084439	8051075	NM_001521	GTF3C2	0.758479	7.215977e-21	1.250312e-16	2.841619e-18
45	8084439	8019263	NM_004309	ARHGDIA	0.758110	7.725611e-21	1.338617e-16	2.974703e-18
46	8084439	8136849	NM_001143679	GSTK1	0.757128	9.259873e-21	1.604458e-16	3.487953e-18
47	8084439	8110803	NM_030782	CLPTM1L	0.756362	1.065833e-20	1.846768e-16	3.929294e-18
48	8084439	8012376	NM_014232	VAMP2	0.755627	1.219378e-20	2.112817e-16	4.401701e-18
49	8084439	7970287	NM_005561	LAMP1	0.755131	1.334831e-20	2.312862e-16	4.720126e-18
50	8084439	7956166	NM_015292	ESYT1	0.753882	1.674796e-20	2.901920e-16	5.803840e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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