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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
14523 8027621 NM_000175 GPI link to infopage glucose-6-phosphate isomerase

Fetching correlation data, please wait...
Getting list of correlations for id 14523.
Getting list of p-values for id 14523.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.135 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8027621 7913256 NM_005216 DDOST link to infopage 0.840607 3.473936e-29 6.019288e-25 6.019288e-25
2 8027621 8110803 NM_030782 CLPTM1L link to infopage 0.815706 3.130149e-26 5.423608e-22 2.711804e-22
3 8027621 8030881 NM_014225 PPP2R1A link to infopage 0.813555 5.366964e-26 9.299338e-22 3.099779e-22
4 8027621 8040908 NM_014748 SNX17 link to infopage 0.803171 6.590103e-25 1.141867e-20 2.854668e-21
5 8027621 7956166 NM_015292 ESYT1 link to infopage 0.800252 1.298531e-24 2.249965e-20 4.499930e-21
6 8027621 8136849 NM_001143679 GSTK1 link to infopage 0.795711 3.649113e-24 6.322818e-20 1.053803e-20
7 8027621 7948744 NM_198335 GANAB link to infopage 0.795334 3.970431e-24 6.879567e-20 9.827952e-21
8 8027621 7964064 NM_004077 CS link to infopage 0.784593 4.115867e-23 7.131563e-19 8.914454e-20
9 8027621 7948696 NM_004739 MTA2 link to infopage 0.783737 4.930087e-23 8.542362e-19 9.491513e-20
10 8027621 7914563 NM_003680 YARS link to infopage 0.782674 6.162041e-23 1.067697e-18 1.067697e-19
11 8027621 7963614 NM_000889 ITGB7 link to infopage 0.782369 6.568171e-23 1.138067e-18 1.034606e-19
12 8027621 8084439 NM_182917 EIF4G1 link to infopage 0.778717 1.398988e-22 2.424026e-18 2.020022e-19
13 8027621 7916590 NM_001625 AK2 link to infopage 0.776992 1.989131e-22 3.446568e-18 2.651206e-19
14 8027621 8119648 NM_057161 KLHDC3 link to infopage 0.774370 3.377080e-22 5.851466e-18 4.179619e-19
15 8027621 8004247 NM_001142798 C17orf49 link to infopage 0.774169 3.515653e-22 6.091572e-18 4.061048e-19
16 8027621 7990151 NM_182470 PKM2 link to infopage 0.773782 3.798943e-22 6.582429e-18 4.114018e-19
17 8027621 8072687 NM_006739 MCM5 link to infopage 0.773604 3.935907e-22 6.819746e-18 4.011615e-19
18 8027621 7904974 NR_003242 C1orf152 link to infopage 0.773301 4.181326e-22 7.244983e-18 4.024990e-19
19 8027621 8026106 NM_004343 CALR link to infopage 0.771808 5.624605e-22 9.745753e-18 5.129344e-19
20 8027621 8064522 NM_174856 IDH3B link to infopage 0.769849 8.272442e-22 1.433366e-17 7.166830e-19
21 8027621 8016099 NM_004247 EFTUD2 link to infopage 0.767912 1.206766e-21 2.090963e-17 9.956967e-19
22 8027621 8007715 NM_021079 NMT1 link to infopage 0.764701 2.238994e-21 3.879505e-17 1.763411e-18
23 8027621 7939767 NM_003682 MADD link to infopage 0.760049 5.388451e-21 9.336569e-17 4.059378e-18
24 8027621 8084423 NM_002808 PSMD2 link to infopage 0.755892 1.161664e-20 2.012815e-16 8.386729e-18
25 8027621 8143781 NM_024711 GIMAP6 link to infopage 0.753257 1.875419e-20 3.249538e-16 1.299815e-17
26 8027621 8013696 NM_014680 KIAA0100 link to infopage 0.751846 2.417853e-20 4.189415e-16 1.611313e-17
27 8027621 8179112 NM_001025091 ABCF1 link to infopage 0.751058 2.783957e-20 4.823762e-16 1.786579e-17
28 8027621 8177797 NM_001025091 ABCF1 link to infopage 0.751058 2.783957e-20 4.823762e-16 1.722772e-17
29 8027621 8117929 NM_001025091 ABCF1 link to infopage 0.751058 2.783957e-20 4.823762e-16 1.663366e-17
30 8027621 7995843 NM_014669 NUP93 link to infopage 0.751033 2.796810e-20 4.846033e-16 1.615344e-17
31 8027621 8004497 NM_001416 EIF4A1 link to infopage 0.751021 2.802420e-20 4.855753e-16 1.566372e-17
32 8027621 8164644 NM_033387 FAM78A link to infopage 0.750371 3.147045e-20 5.452885e-16 1.704027e-17
33 8027621 8149638 NM_003974 DOK2 link to infopage 0.749414 3.730809e-20 6.464373e-16 1.958901e-17
34 8027621 7949496 NM_005507 CFL1 link to infopage 0.749059 3.973141e-20 6.884262e-16 2.024783e-17
35 8027621 7903619 NM_006513 SARS link to infopage 0.747360 5.361135e-20 9.289238e-16 2.654068e-17
36 8027621 8139433 NM_033054 MYO1G link to infopage 0.743004 1.143467e-19 1.981285e-15 5.503570e-17
37 8027621 7941382 NM_182710 KAT5 link to infopage 0.742720 1.200878e-19 2.080762e-15 5.623680e-17
38 8027621 7959205 NM_014730 MLEC link to infopage 0.742099 1.335935e-19 2.314775e-15 6.091513e-17
39 8027621 8024019 NM_002819 PTBP1 link to infopage 0.741803 1.405335e-19 2.435024e-15 6.243652e-17
40 8027621 8073645 NM_015380 SAMM50 link to infopage 0.741121 1.579204e-19 2.736287e-15 6.840717e-17
41 8027621 7948192 NM_003146 SSRP1 link to infopage 0.740308 1.813797e-19 3.142766e-15 7.665282e-17
42 8027621 8019250 NM_000918 P4HB link to infopage 0.740148 1.863698e-19 3.229229e-15 7.688641e-17
43 8027621 8073192 NM_006003 UQCRFS1 link to infopage 0.739938 1.931418e-19 3.346568e-15 7.782717e-17
44 8027621 7915504 NM_022821 ELOVL1 link to infopage 0.738906 2.300244e-19 3.985633e-15 9.058256e-17
45 8027621 8104166 NM_004168 SDHA link to infopage 0.738789 2.346045e-19 4.064992e-15 9.033316e-17
46 8027621 7912198 NM_001428 ENO1 link to infopage 0.735278 4.224501e-19 7.319793e-15 1.591259e-16
47 8027621 7919950 NM_002651 PI4KB link to infopage 0.735235 4.254538e-19 7.371838e-15 1.568476e-16
48 8027621 8030007 NM_001425 EMP3 link to infopage 0.734852 4.534042e-19 7.856135e-15 1.636695e-16
49 8027621 8079563 NM_138615 DHX30 link to infopage 0.733793 5.402484e-19 9.360883e-15 1.910384e-16
50 8027621 8062349 NM_002951 RPN2 link to infopage 0.732296 6.910537e-19 1.197389e-14 2.394777e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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