[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
15242 7903619 NM_006513 SARS link to infopage seryl-tRNA synthetase

Fetching correlation data, please wait...
Getting list of correlations for id 15242.
Getting list of p-values for id 15242.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.123 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7903619 8018600 NM_014230 SRP68 link to infopage 0.885249 5.072719e-36 8.789500e-32 8.789500e-32
2 7903619 8073457 NM_001469 XRCC6 link to infopage 0.883251 1.171179e-35 2.029302e-31 1.014651e-31
3 7903619 8064351 NM_177559 CSNK2A1 link to infopage 0.874263 4.214035e-34 7.301659e-30 2.433886e-30
4 7903619 8062349 NM_002951 RPN2 link to infopage 0.869911 2.166723e-33 3.754281e-29 9.385703e-30
5 7903619 8114396 NM_004661 CDC23 link to infopage 0.861992 3.685343e-32 6.385594e-28 1.277119e-28
6 7903619 8109368 NM_005754 G3BP1 link to infopage 0.846714 5.471337e-30 9.480186e-26 1.580031e-26
7 7903619 8104166 NM_004168 SDHA link to infopage 0.846311 6.196943e-30 1.073744e-25 1.533921e-26
8 7903619 7899774 NM_004964 HDAC1 link to infopage 0.843678 1.384805e-29 2.399451e-25 2.999314e-26
9 7903619 7957746 NM_213611 SLC25A3 link to infopage 0.841339 2.795053e-29 4.842989e-25 5.381099e-26
10 7903619 8171516 NM_002893 RBBP7 link to infopage 0.835450 1.558871e-28 2.701056e-24 2.701056e-25
11 7903619 8101376 NM_014933 SEC31A link to infopage 0.834139 2.264694e-28 3.924035e-24 3.567305e-25
12 7903619 8042720 NM_006429 CCT7 link to infopage 0.828086 1.218616e-27 2.111495e-23 1.759579e-24
13 7903619 8006392 NM_002815 PSMD11 link to infopage 0.827428 1.457347e-27 2.525146e-23 1.942420e-24
14 7903619 7920317 NM_004515 ILF2 link to infopage 0.826736 1.757736e-27 3.045628e-23 2.175449e-24
15 7903619 8147447 NM_014754 PTDSS1 link to infopage 0.826571 1.837905e-27 3.184538e-23 2.123025e-24
16 7903619 8048120 NM_004044 ATIC link to infopage 0.824205 3.464461e-27 6.002871e-23 3.751795e-24
17 7903619 8145586 NM_018091 ELP3 link to infopage 0.823677 3.985672e-27 6.905973e-23 4.062337e-24
18 7903619 8072946 NM_016091 EIF3L link to infopage 0.823075 4.673409e-27 8.097615e-23 4.498675e-24
19 7903619 7912198 NM_001428 ENO1 link to infopage 0.819692 1.130941e-26 1.959582e-22 1.031359e-23
20 7903619 7948744 NM_198335 GANAB link to infopage 0.819173 1.293272e-26 2.240853e-22 1.120426e-23
21 7903619 8168280 NM_001145408 NONO link to infopage 0.817485 1.993155e-26 3.453540e-22 1.644543e-23
22 7903619 7981032 NM_020414 DDX24 link to infopage 0.817064 2.218829e-26 3.844564e-22 1.747529e-23
23 7903619 8179174 NM_178014 TUBB link to infopage 0.815605 3.210966e-26 5.563641e-22 2.418974e-23
24 7903619 8117995 NM_178014 TUBB link to infopage 0.815605 3.210966e-26 5.563641e-22 2.318184e-23
25 7903619 8177858 NM_178014 TUBB link to infopage 0.815605 3.210966e-26 5.563641e-22 2.225456e-23
26 7903619 8050908 NM_000182 HADHA link to infopage 0.815586 3.226323e-26 5.590250e-22 2.150096e-23
27 7903619 7993680 BC050464 C16orf62 link to infopage 0.814795 3.935908e-26 6.819748e-22 2.525832e-23
28 7903619 7914563 NM_003680 YARS link to infopage 0.814529 4.208074e-26 7.291329e-22 2.604046e-23
29 7903619 7931187 NM_004725 BUB3 link to infopage 0.814120 4.661360e-26 8.076739e-22 2.785082e-23
30 7903619 7983274 NM_005313 PDIA3 link to infopage 0.812380 7.182494e-26 1.244511e-21 4.148369e-23
31 7903619 7941709 NM_002896 RBM4 link to infopage 0.811999 7.891194e-26 1.367307e-21 4.410668e-23
32 7903619 7944991 NM_152713 STT3A link to infopage 0.811524 8.871680e-26 1.537196e-21 4.803738e-23
33 7903619 8025429 NM_005968 HNRNPM link to infopage 0.811323 9.320248e-26 1.614919e-21 4.893695e-23
34 7903619 8105153 NM_012343 NNT link to infopage 0.810774 1.066395e-25 1.847742e-21 5.434536e-23
35 7903619 8016099 NM_004247 EFTUD2 link to infopage 0.810635 1.103460e-25 1.911964e-21 5.462755e-23
36 7903619 7948332 NM_004811 LPXN link to infopage 0.810615 1.108869e-25 1.921338e-21 5.337051e-23
37 7903619 8143781 NM_024711 GIMAP6 link to infopage 0.810485 1.144777e-25 1.983555e-21 5.360959e-23
38 7903619 8018922 NM_004762 CYTH1 link to infopage 0.809105 1.601760e-25 2.775369e-21 7.303603e-23
39 7903619 7967149 NM_016237 ANAPC5 link to infopage 0.808665 1.781970e-25 3.087620e-21 7.916974e-23
40 7903619 7904881 NR_002305 PDIA3P link to infopage 0.807806 2.192414e-25 3.798795e-21 9.496988e-23
41 7903619 8073645 NM_015380 SAMM50 link to infopage 0.807204 2.533456e-25 4.389719e-21 1.070663e-22
42 7903619 7899504 NM_006582 GMEB1 link to infopage 0.806744 2.828231e-25 4.900476e-21 1.166780e-22
43 7903619 8152628 NM_024295 DERL1 link to infopage 0.806139 3.268447e-25 5.663238e-21 1.317032e-22
44 7903619 7904254 NM_000701 ATP1A1 link to infopage 0.805921 3.442163e-25 5.964235e-21 1.355508e-22
45 7903619 7930498 NM_016234 ACSL5 link to infopage 0.804245 5.119710e-25 8.870922e-21 1.971316e-22
46 7903619 7948997 NM_015459 ATL3 link to infopage 0.804227 5.141479e-25 8.908641e-21 1.936661e-22
47 7903619 7939242 NM_005898 CAPRIN1 link to infopage 0.804078 5.326138e-25 9.228600e-21 1.963532e-22
48 7903619 8164177 NM_001006617 MAPKAP1 link to infopage 0.803802 5.682849e-25 9.846673e-21 2.051390e-22
49 7903619 7989834 AK296134 C15orf44 link to infopage 0.802252 8.168028e-25 1.415274e-20 2.888315e-22
50 7903619 8162313 NM_013417 IARS link to infopage 0.801688 9.315631e-25 1.614119e-20 3.228239e-22

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!