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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 14670.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
14670 8062349 NM_002951 RPN2 link to infopage ribophorin II

Fetching correlation data, please wait...
Getting list of correlations for id 14670.
Getting list of p-values for id 14670.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.116 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8062349 8064351 NM_177559 CSNK2A1 link to infopage 0.879244 5.993193e-35 1.038441e-30 1.038441e-30
2 8062349 7903619 NM_006513 SARS link to infopage 0.869911 2.166723e-33 3.754281e-29 1.877141e-29
3 8062349 8101376 NM_014933 SEC31A link to infopage 0.867365 5.496376e-33 9.523571e-29 3.174524e-29
4 8062349 8018600 NM_014230 SRP68 link to infopage 0.860927 5.322123e-32 9.221642e-28 2.305410e-28
5 8062349 7904881 NR_002305 PDIA3P link to infopage 0.859099 9.934413e-32 1.721336e-27 3.442671e-28
6 8062349 7981032 NM_020414 DDX24 link to infopage 0.856116 2.699022e-31 4.676595e-27 7.794326e-28
7 8062349 7983274 NM_005313 PDIA3 link to infopage 0.854668 4.350334e-31 7.537824e-27 1.076832e-27
8 8062349 8109368 NM_005754 G3BP1 link to infopage 0.848104 3.552048e-30 6.154633e-26 7.693292e-27
9 8062349 7961489 NM_016312 WBP11 link to infopage 0.847039 4.947963e-30 8.573336e-26 9.525929e-27
10 8062349 7993680 BC050464 C16orf62 link to infopage 0.843596 1.419810e-29 2.460104e-25 2.460104e-26
11 8062349 8088247 NM_001128615 ARHGEF3 link to infopage 0.843123 1.637662e-29 2.837576e-25 2.579615e-26
12 8062349 7957746 NM_213611 SLC25A3 link to infopage 0.842552 1.944520e-29 3.369269e-25 2.807724e-26
13 8062349 8018315 NM_006937 SUMO2 link to infopage 0.837013 9.944928e-29 1.723158e-24 1.325506e-25
14 8062349 8006392 NM_002815 PSMD11 link to infopage 0.836975 1.005438e-28 1.742122e-24 1.244373e-25
15 8062349 8174636 NM_006937 SUMO2 link to infopage 0.836184 1.263092e-28 2.188559e-24 1.459039e-25
16 8062349 8070269 NM_006052 DSCR3 link to infopage 0.834691 1.935931e-28 3.354388e-24 2.096492e-25
17 8062349 8178322 NM_006937 SUMO2 link to infopage 0.834260 2.188456e-28 3.791938e-24 2.230552e-25
18 8062349 8162313 NM_013417 IARS link to infopage 0.834234 2.204455e-28 3.819659e-24 2.122033e-25
19 8062349 8117995 NM_178014 TUBB link to infopage 0.827875 1.290724e-27 2.236438e-23 1.177073e-24
20 8062349 8177858 NM_178014 TUBB link to infopage 0.827875 1.290724e-27 2.236438e-23 1.118219e-24
21 8062349 8179174 NM_178014 TUBB link to infopage 0.827875 1.290724e-27 2.236438e-23 1.064971e-24
22 8062349 7963244 NM_005653 TFCP2 link to infopage 0.827507 1.426473e-27 2.471649e-23 1.123477e-24
23 8062349 8073457 NM_001469 XRCC6 link to infopage 0.827435 1.454621e-27 2.520422e-23 1.095836e-24
24 8062349 7967149 NM_016237 ANAPC5 link to infopage 0.825223 2.640765e-27 4.575654e-23 1.906523e-24
25 8062349 8171516 NM_002893 RBBP7 link to infopage 0.824721 3.019407e-27 5.231726e-23 2.092690e-24
26 8062349 8143781 NM_024711 GIMAP6 link to infopage 0.823720 3.940113e-27 6.827035e-23 2.625783e-24
27 8062349 7948744 NM_198335 GANAB link to infopage 0.823275 4.432836e-27 7.680776e-23 2.844732e-24
28 8062349 7908732 NM_018085 IPO9 link to infopage 0.823213 4.506696e-27 7.808752e-23 2.788840e-24
29 8062349 8004497 NM_001416 EIF4A1 link to infopage 0.823025 4.736066e-27 8.206181e-23 2.829718e-24
30 8062349 7939242 NM_005898 CAPRIN1 link to infopage 0.821599 6.888013e-27 1.193486e-22 3.978287e-24
31 8062349 8147447 NM_014754 PTDSS1 link to infopage 0.820281 9.709671e-27 1.682395e-22 5.427080e-24
32 8062349 8068289 NM_138927 SON link to infopage 0.819412 1.215948e-26 2.106873e-22 6.583978e-24
33 8062349 8164177 NM_001006617 MAPKAP1 link to infopage 0.818137 1.687572e-26 2.924056e-22 8.860777e-24
34 8062349 8133434 NM_022170 EIF4H link to infopage 0.817870 1.806598e-26 3.130292e-22 9.206742e-24
35 8062349 7904254 NM_000701 ATP1A1 link to infopage 0.815969 2.928746e-26 5.074639e-22 1.449897e-23
36 8062349 7913169 NM_004930 CAPZB link to infopage 0.815172 3.580362e-26 6.203692e-22 1.723248e-23
37 8062349 7990211 NM_000520 HEXA link to infopage 0.815141 3.608655e-26 6.252717e-22 1.689924e-23
38 8062349 7898337 NM_018090 NECAP2 link to infopage 0.815122 3.625688e-26 6.282229e-22 1.653218e-23
39 8062349 7955908 NM_005337 NCKAP1L link to infopage 0.814718 4.012627e-26 6.952680e-22 1.782738e-23
40 8062349 7948997 NM_015459 ATL3 link to infopage 0.814458 4.283554e-26 7.422113e-22 1.855528e-23
41 8062349 8130505 NM_003379 EZR link to infopage 0.814424 4.320224e-26 7.485652e-22 1.825769e-23
42 8062349 8123524 NM_018303 EXOC2 link to infopage 0.814418 4.326450e-26 7.496440e-22 1.784867e-23
43 8062349 7948696 NM_004739 MTA2 link to infopage 0.813932 4.885274e-26 8.464715e-22 1.968538e-23
44 8062349 8050908 NM_000182 HADHA link to infopage 0.812803 6.468384e-26 1.120777e-21 2.547220e-23
45 8062349 8047641 NM_177538 CYP20A1 link to infopage 0.810228 1.218731e-25 2.111695e-21 4.692656e-23
46 8062349 8166184 NM_007220 CA5B link to infopage 0.809886 1.324923e-25 2.295694e-21 4.990638e-23
47 8062349 7999520 NM_015659 RSL1D1 link to infopage 0.809498 1.456010e-25 2.522829e-21 5.367721e-23
48 8062349 8164883 NM_033161 SURF4 link to infopage 0.808981 1.650615e-25 2.860020e-21 5.958374e-23
49 8062349 8152782 NM_014846 KIAA0196 link to infopage 0.808624 1.799596e-25 3.118160e-21 6.363593e-23
50 8062349 7948332 NM_004811 LPXN link to infopage 0.808567 1.824486e-25 3.161287e-21 6.322575e-23

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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