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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
15118 8164883 NM_033161 SURF4 link to infopage surfeit 4

Fetching correlation data, please wait...
Getting list of correlations for id 15118.
Getting list of p-values for id 15118.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.155 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8164883 8099340 NM_017491 WDR1 link to infopage 0.839072 5.461495e-29 9.463133e-25 9.463133e-25
2 8164883 8160914 NM_007126 VCP link to infopage 0.833835 2.468780e-28 4.277655e-24 2.138827e-24
3 8164883 8019250 NM_000918 P4HB link to infopage 0.830609 6.091549e-28 1.055483e-23 3.518276e-24
4 8164883 7914834 NM_002794 PSMB2 link to infopage 0.822898 4.896885e-27 8.484832e-23 2.121208e-23
5 8164883 8024019 NM_002819 PTBP1 link to infopage 0.821913 6.344712e-27 1.099348e-22 2.198696e-23
6 8164883 8009164 NM_005828 DCAF7 link to infopage 0.813144 5.943807e-26 1.029883e-21 1.716472e-22
7 8164883 7952557 NM_003139 SRPR link to infopage 0.811008 1.007101e-25 1.745004e-21 2.492863e-22
8 8164883 8062349 NM_002951 RPN2 link to infopage 0.808981 1.650615e-25 2.860020e-21 3.575025e-22
9 8164883 8090490 NM_002950 RPN1 link to infopage 0.808817 1.717539e-25 2.975980e-21 3.306645e-22
10 8164883 7949496 NM_005507 CFL1 link to infopage 0.808816 1.717832e-25 2.976488e-21 2.976488e-22
11 8164883 7913169 NM_004930 CAPZB link to infopage 0.802978 6.894263e-25 1.194569e-20 1.085972e-21
12 8164883 7955908 NM_005337 NCKAP1L link to infopage 0.794261 5.047368e-24 8.745574e-20 7.287979e-21
13 8164883 8157283 NM_004697 PRPF4 link to infopage 0.791884 8.541902e-24 1.480055e-19 1.138504e-20
14 8164883 8138773 NM_022170 EIF4H link to infopage 0.789737 1.365929e-23 2.366745e-19 1.690532e-20
15 8164883 8053890 NM_020151 STARD7 link to infopage 0.789395 1.471384e-23 2.549467e-19 1.699645e-20
16 8164883 8073192 NM_006003 UQCRFS1 link to infopage 0.788588 1.752252e-23 3.036126e-19 1.897579e-20
17 8164883 7898328 NM_001114600 C1orf144 link to infopage 0.788529 1.774739e-23 3.075090e-19 1.808876e-20
18 8164883 8086028 NM_000404 GLB1 link to infopage 0.788239 1.889486e-23 3.273912e-19 1.818840e-20
19 8164883 7911619 NM_002074 GNB1 link to infopage 0.786788 2.580408e-23 4.471073e-19 2.353196e-20
20 8164883 8015460 NM_001096 ACLY link to infopage 0.785956 3.081525e-23 5.339358e-19 2.669679e-20
21 8164883 7990211 NM_000520 HEXA link to infopage 0.783380 5.314331e-23 9.208141e-19 4.384829e-20
22 8164883 8076465 NM_032311 POLDIP3 link to infopage 0.782425 6.492655e-23 1.124982e-18 5.113556e-20
23 8164883 8064522 NM_174856 IDH3B link to infopage 0.781909 7.230928e-23 1.252903e-18 5.447404e-20
24 8164883 8139433 NM_033054 MYO1G link to infopage 0.779914 1.093522e-22 1.894746e-18 7.894776e-20
25 8164883 7948696 NM_004739 MTA2 link to infopage 0.778940 1.336301e-22 2.315408e-18 9.261632e-20
26 8164883 8152628 NM_024295 DERL1 link to infopage 0.778169 1.564955e-22 2.711597e-18 1.042922e-19
27 8164883 7949765 NM_001008709 PPP1CA link to infopage 0.777848 1.670977e-22 2.895302e-18 1.072334e-19
28 8164883 7915504 NM_022821 ELOVL1 link to infopage 0.777734 1.710148e-22 2.963173e-18 1.058276e-19
29 8164883 8013696 NM_014680 KIAA0100 link to infopage 0.775833 2.515822e-22 4.359165e-18 1.503160e-19
30 8164883 8052925 NM_144582 TEX261 link to infopage 0.773469 4.043746e-22 7.006599e-18 2.335533e-19
31 8164883 8179298 NM_001320 CSNK2B link to infopage 0.772490 4.913904e-22 8.514321e-18 2.746555e-19
32 8164883 8016099 NM_004247 EFTUD2 link to infopage 0.772136 5.271219e-22 9.133441e-18 2.854200e-19
33 8164883 7975976 NM_012111 AHSA1 link to infopage 0.770380 7.453897e-22 1.291537e-17 3.913747e-19
34 8164883 7919856 NM_181746 LASS2 link to infopage 0.768486 1.079436e-21 1.870339e-17 5.500998e-19
35 8164883 7940051 NM_015457 ZDHHC5 link to infopage 0.767914 1.206498e-21 2.090500e-17 5.972857e-19
36 8164883 8150112 NM_000637 GSR link to infopage 0.767684 1.261490e-21 2.185784e-17 6.071623e-19
37 8164883 7944991 NM_152713 STT3A link to infopage 0.767465 1.316184e-21 2.280553e-17 6.163656e-19
38 8164883 8116096 NM_016222 DDX41 link to infopage 0.767111 1.409419e-21 2.442101e-17 6.426580e-19
39 8164883 8133434 NM_022170 EIF4H link to infopage 0.766634 1.545309e-21 2.677558e-17 6.865532e-19
40 8164883 8118218 NM_001320 CSNK2B link to infopage 0.765343 1.980457e-21 3.431537e-17 8.578843e-19
41 8164883 7982326 NM_015995 KLF13 link to infopage 0.764072 2.524497e-21 4.374196e-17 1.066877e-18
42 8164883 8068974 NM_003274 TRAPPC10 link to infopage 0.763570 2.777174e-21 4.812009e-17 1.145716e-18
43 8164883 8009932 NM_013260 SAP30BP link to infopage 0.762861 3.176772e-21 5.504394e-17 1.280092e-18
44 8164883 7999791 NM_001004067 NOMO3 link to infopage 0.762454 3.430512e-21 5.944048e-17 1.350920e-18
45 8164883 7993371 NM_001004067 NOMO3 link to infopage 0.762454 3.430512e-21 5.944048e-17 1.320900e-18
46 8164883 7993511 NM_001004067 NOMO3 link to infopage 0.762454 3.430512e-21 5.944048e-17 1.292184e-18
47 8164883 8178050 NM_001320 CSNK2B link to infopage 0.761991 3.743598e-21 6.486532e-17 1.380113e-18
48 8164883 8006392 NM_002815 PSMD11 link to infopage 0.761056 4.463783e-21 7.734397e-17 1.611333e-18
49 8164883 7933164 NM_004966 HNRNPF link to infopage 0.758853 6.732501e-21 1.166540e-16 2.380695e-18
50 8164883 8082408 NM_013336 SEC61A1 link to infopage 0.758627 7.020142e-21 1.216380e-16 2.432760e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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