[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
14087	7913256	NM_005216	DDOST		dolichyl-diphosphooligosaccharide--protein glycosyltransferase

Fetching correlation data, please wait...
Getting list of correlations for id 14087.
Getting list of p-values for id 14087.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.124 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7913256	8110803	NM_030782	CLPTM1L	0.882164	1.833728e-35	3.177301e-31	3.177301e-31
2	7913256	8119648	NM_057161	KLHDC3	0.881008	2.942185e-35	5.097925e-31	2.548962e-31
3	7913256	8040908	NM_014748	SNX17	0.869875	2.195925e-33	3.804879e-29	1.268293e-29
4	7913256	8030007	NM_001425	EMP3	0.848533	3.106357e-30	5.382385e-26	1.345596e-26
5	7913256	8027621	NM_000175	GPI	0.840607	3.473936e-29	6.019288e-25	1.203858e-25
6	7913256	8007715	NM_021079	NMT1	0.840541	3.542519e-29	6.138122e-25	1.023020e-25
7	7913256	8133434	NM_022170	EIF4H	0.837466	8.723765e-29	1.511567e-24	2.159381e-25
8	7913256	8138773	NM_022170	EIF4H	0.831210	5.155651e-28	8.933196e-24	1.116650e-24
9	7913256	7989619	NM_000942	PPIB	0.826507	1.869996e-27	3.240143e-23	3.600159e-24
10	7913256	8073192	NM_006003	UQCRFS1	0.825210	2.649376e-27	4.590573e-23	4.590573e-24
11	7913256	8064522	NM_174856	IDH3B	0.824650	3.077578e-27	5.332520e-23	4.847745e-24
12	7913256	7978208	NM_012461	TINF2	0.818877	1.395535e-26	2.418043e-22	2.015036e-23
13	7913256	7990211	NM_000520	HEXA	0.816667	2.454534e-26	4.252971e-22	3.271516e-23
14	7913256	8028514	NM_013234	EIF3K	0.816532	2.539988e-26	4.401037e-22	3.143598e-23
15	7913256	7948696	NM_004739	MTA2	0.813205	5.855030e-26	1.014501e-21	6.763341e-23
16	7913256	7899737	NM_003757	EIF3I	0.812335	7.263605e-26	1.258565e-21	7.866030e-23
17	7913256	7914563	NM_003680	YARS	0.810739	1.075647e-25	1.863774e-21	1.096337e-22
18	7913256	7916590	NM_001625	AK2	0.807177	2.550037e-25	4.418450e-21	2.454694e-22
19	7913256	8075924	NM_002405	MFNG	0.806404	3.068046e-25	5.316003e-21	2.797896e-22
20	7913256	7948744	NM_198335	GANAB	0.805541	3.767944e-25	6.528717e-21	3.264359e-22
21	7913256	8004247	NM_001142798	C17orf49	0.804605	4.703333e-25	8.149465e-21	3.880698e-22
22	7913256	8143781	NM_024711	GIMAP6	0.803964	5.470376e-25	9.478521e-21	4.308418e-22
23	7913256	8116020	NM_006816	LMAN2	0.803325	6.356347e-25	1.101364e-20	4.788540e-22
24	7913256	8004497	NM_001416	EIF4A1	0.802127	8.410584e-25	1.457302e-20	6.072091e-22
25	7913256	8165309	NM_003792	EDF1	0.798415	1.978363e-24	3.427909e-20	1.371163e-21
26	7913256	7915504	NM_022821	ELOVL1	0.797587	2.388851e-24	4.139163e-20	1.591986e-21
27	7913256	8062174	NM_198398	ERGIC3	0.797336	2.528727e-24	4.381525e-20	1.622787e-21
28	7913256	7941382	NM_182710	KAT5	0.796970	2.746893e-24	4.759542e-20	1.699837e-21
29	7913256	8134699	NM_006833	COPS6	0.795839	3.545272e-24	6.142893e-20	2.118239e-21
30	7913256	8016099	NM_004247	EFTUD2	0.792300	7.794467e-24	1.350547e-19	4.501824e-21
31	7913256	8104166	NM_004168	SDHA	0.791808	8.685255e-24	1.504894e-19	4.854497e-21
32	7913256	8030881	NM_014225	PPP2R1A	0.791500	9.294956e-24	1.610537e-19	5.032928e-21
33	7913256	8149638	NM_003974	DOK2	0.789953	1.303410e-23	2.258418e-19	6.843692e-21
34	7913256	7903619	NM_006513	SARS	0.789077	1.576477e-23	2.731561e-19	8.034004e-21
35	7913256	8073645	NM_015380	SAMM50	0.787298	2.312974e-23	4.007691e-19	1.145054e-20
36	7913256	7958152	NM_002629	PGAM1	0.786786	2.581114e-23	4.472296e-19	1.242305e-20
37	7913256	7990151	NM_182470	PKM2	0.786273	2.880295e-23	4.990688e-19	1.348835e-20
38	7913256	7912198	NM_001428	ENO1	0.784987	3.785824e-23	6.559697e-19	1.726236e-20
39	7913256	8148270	NM_005005	NDUFB9	0.784912	3.846967e-23	6.665640e-19	1.709138e-20
40	7913256	7911559	NM_017971	MRPL20	0.784224	4.449093e-23	7.708944e-19	1.927236e-20
41	7913256	8039939	NM_017971	MRPL20	0.784224	4.449093e-23	7.708944e-19	1.880230e-20
42	7913256	8015712	NM_001040431	CCDC56	0.784018	4.646753e-23	8.051429e-19	1.917007e-20
43	7913256	8032730	NM_001961	EEF2	0.782372	6.564498e-23	1.137431e-18	2.645187e-20
44	7913256	7965480	NM_002629	PGAM1	0.781814	7.375507e-23	1.277954e-18	2.904441e-20
45	7913256	7929624	NM_002629	PGAM1	0.781456	7.945495e-23	1.376716e-18	3.059369e-20
46	7913256	8026106	NM_004343	CALR	0.780143	1.043193e-22	1.807540e-18	3.929435e-20
47	7913256	8062349	NM_002951	RPN2	0.779669	1.150171e-22	1.992901e-18	4.240216e-20
48	7913256	8136849	NM_001143679	GSTK1	0.778669	1.412658e-22	2.447712e-18	5.099401e-20
49	7913256	7904974	NR_003242	C1orf152	0.777037	1.971125e-22	3.415369e-18	6.970141e-20
50	7913256	8123148	NM_014161	MRPL18	0.775477	2.703160e-22	4.683765e-18	9.367530e-20

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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