[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
14834 8149638 NM_003974 DOK2 link to infopage docking protein 2, 56kDa

Fetching correlation data, please wait...
Getting list of correlations for id 14834.
Getting list of p-values for id 14834.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.159 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8149638 7913256 NM_005216 DDOST link to infopage 0.789953 1.303410e-23 2.258418e-19 2.258418e-19
2 8149638 8030007 NM_001425 EMP3 link to infopage 0.756796 9.842231e-21 1.705363e-16 8.526817e-17
3 8149638 8027621 NM_000175 GPI link to infopage 0.749414 3.730809e-20 6.464373e-16 2.154791e-16
4 8149638 8026106 NM_004343 CALR link to infopage 0.745499 7.423990e-20 1.286355e-15 3.215887e-16
5 8149638 8040908 NM_014748 SNX17 link to infopage 0.743679 1.017918e-19 1.763746e-15 3.527491e-16
6 8149638 7991374 NM_002168 IDH2 link to infopage 0.736053 3.713100e-19 6.433689e-15 1.072281e-15
7 8149638 8110803 NM_030782 CLPTM1L link to infopage 0.735315 4.198725e-19 7.275131e-15 1.039304e-15
8 8149638 8138773 NM_022170 EIF4H link to infopage 0.732807 6.355171e-19 1.101161e-14 1.376451e-15
9 8149638 8133434 NM_022170 EIF4H link to infopage 0.724105 2.584300e-18 4.477816e-14 4.975351e-15
10 8149638 8119648 NM_057161 KLHDC3 link to infopage 0.723858 2.687122e-18 4.655975e-14 4.655975e-15
11 8149638 8019273 NM_005782 THOC4 link to infopage 0.722807 3.171049e-18 5.494477e-14 4.994979e-15
12 8149638 8060758 NM_000311 PRNP link to infopage 0.718000 6.699666e-18 1.160851e-13 9.673760e-15
13 8149638 8116020 NM_006816 LMAN2 link to infopage 0.712095 1.644500e-17 2.849425e-13 2.191865e-14
14 8149638 7965480 NM_002629 PGAM1 link to infopage 0.710514 2.083255e-17 3.609656e-13 2.578326e-14
15 8149638 7914563 NM_003680 YARS link to infopage 0.709472 2.432877e-17 4.215446e-13 2.810297e-14
16 8149638 7990151 NM_182470 PKM2 link to infopage 0.708850 2.667813e-17 4.622520e-13 2.889075e-14
17 8149638 7989619 NM_000942 PPIB link to infopage 0.707807 3.112341e-17 5.392753e-13 3.172208e-14
18 8149638 8134552 NM_005720 ARPC1B link to infopage 0.706058 4.024676e-17 6.973556e-13 3.874198e-14
19 8149638 7913883 NM_000437 PAFAH2 link to infopage 0.705307 4.491259e-17 7.782005e-13 4.095792e-14
20 8149638 7929624 NM_002629 PGAM1 link to infopage 0.705207 4.557225e-17 7.896303e-13 3.948152e-14
21 8149638 8139433 NM_033054 MYO1G link to infopage 0.704205 5.273214e-17 9.136898e-13 4.350904e-14
22 8149638 7941382 NM_182710 KAT5 link to infopage 0.702829 6.436046e-17 1.115174e-12 5.068971e-14
23 8149638 8007715 NM_021079 NMT1 link to infopage 0.702396 6.850846e-17 1.187046e-12 5.161070e-14
24 8149638 8019250 NM_000918 P4HB link to infopage 0.701247 8.081838e-17 1.400340e-12 5.834750e-14
25 8149638 8064522 NM_174856 IDH3B link to infopage 0.701216 8.118087e-17 1.406621e-12 5.626484e-14
26 8149638 7934753 NM_001099692 EIF5AL1 link to infopage 0.700973 8.406498e-17 1.456594e-12 5.602284e-14
27 8149638 7990211 NM_000520 HEXA link to infopage 0.697815 1.317835e-16 2.283413e-12 8.457086e-14
28 8149638 7958152 NM_002629 PGAM1 link to infopage 0.696105 1.677202e-16 2.906087e-12 1.037888e-13
29 8149638 7899737 NM_003757 EIF3I link to infopage 0.695562 1.809923e-16 3.136054e-12 1.081398e-13
30 8149638 7928630 link to infopage 0.694007 2.249106e-16 3.897026e-12 1.299009e-13
31 8149638 8163383 NM_022486 SUSD1 link to infopage 0.693125 2.542508e-16 4.405404e-12 1.421098e-13
32 8149638 8172905 NM_004493 HSD17B10 link to infopage 0.692537 2.758558e-16 4.779753e-12 1.493673e-13
33 8149638 8084423 NM_002808 PSMD2 link to infopage 0.692451 2.791634e-16 4.837065e-12 1.465777e-13
34 8149638 7916590 NM_001625 AK2 link to infopage 0.690210 3.801723e-16 6.587245e-12 1.937425e-13
35 8149638 7978208 NM_012461 TINF2 link to infopage 0.689731 4.059346e-16 7.033629e-12 2.009608e-13
36 8149638 7928600 NM_001099692 EIF5AL1 link to infopage 0.689673 4.091723e-16 7.089729e-12 1.969369e-13
37 8149638 8177717 NM_018950 HLA-F link to infopage 0.689447 4.220628e-16 7.313083e-12 1.976509e-13
38 8149638 8019772 NM_005782 THOC4 link to infopage 0.686856 6.003549e-16 1.040235e-11 2.737460e-13
39 8149638 7918593 NM_175744 RHOC link to infopage 0.686672 6.155305e-16 1.066530e-11 2.734691e-13
40 8149638 8004247 NM_001142798 C17orf49 link to infopage 0.686269 6.499388e-16 1.126149e-11 2.815373e-13
41 8149638 8011759 NM_005022 PFN1 link to infopage 0.686027 6.714871e-16 1.163486e-11 2.837770e-13
42 8149638 8165309 NM_003792 EDF1 link to infopage 0.683379 9.579708e-16 1.659876e-11 3.952086e-13
43 8149638 8179019 NM_018950 HLA-F link to infopage 0.683334 9.637499e-16 1.669889e-11 3.883464e-13
44 8149638 8072876 NM_002305 LGALS1 link to infopage 0.681322 1.259317e-15 2.182019e-11 4.959134e-13
45 8149638 8126371 NM_001760 CCND3 link to infopage 0.677600 2.053751e-15 3.558535e-11 7.907856e-13
46 8149638 8072687 NM_006739 MCM5 link to infopage 0.677174 2.170921e-15 3.761555e-11 8.177293e-13
47 8149638 8073192 NM_006003 UQCRFS1 link to infopage 0.676366 2.411404e-15 4.178239e-11 8.889871e-13
48 8149638 7990757 NM_004390 CTSH link to infopage 0.675065 2.853980e-15 4.945091e-11 1.030227e-12
49 8149638 8036636 NM_012237 SIRT2 link to infopage 0.674743 2.975039e-15 5.154849e-11 1.052010e-12
50 8149638 8176282 NM_001029891 PGAM4 link to infopage 0.674366 3.123351e-15 5.411830e-11 1.082366e-12

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!