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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 16706.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
16706 7928630 link to infopage

Fetching correlation data, please wait...
Getting list of correlations for id 16706.
Getting list of p-values for id 16706.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.113 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7928630 7928600 NM_001099692 EIF5AL1 link to infopage 0.996181 6.744842e-111 1.168679e-106 1.168679e-106
2 7928630 7934753 NM_001099692 EIF5AL1 link to infopage 0.995819 7.048564e-109 1.221305e-104 6.106523e-105
3 7928630 7973067 NM_000270 PNP link to infopage 0.838789 5.933046e-29 1.028019e-24 3.426730e-25
4 7928630 7958414 NM_014301 ISCU link to infopage 0.828288 1.153351e-27 1.998412e-23 4.996029e-24
5 7928630 8006392 NM_002815 PSMD11 link to infopage 0.813395 5.583834e-26 9.675109e-22 1.935022e-22
6 7928630 8062174 NM_198398 ERGIC3 link to infopage 0.804799 4.492743e-25 7.784576e-21 1.297429e-21
7 7928630 8084345 NM_004068 AP2M1 link to infopage 0.801247 1.031774e-24 1.787755e-20 2.553936e-21
8 7928630 8060225 NM_203346 HDLBP link to infopage 0.797379 2.504004e-24 4.338688e-20 5.423360e-21
9 7928630 7934326 NM_016065 MRPS16 link to infopage 0.796137 3.315568e-24 5.744885e-20 6.383206e-21
10 7928630 7913665 ENST00000410831 link to infopage 0.780932 8.859896e-23 1.535154e-18 1.535154e-19
11 7928630 8010768 link to infopage -0.775315 2.793029e-22 4.839482e-18 4.399529e-19
12 7928630 8125850 NM_024294 C6orf106 link to infopage 0.774318 3.412243e-22 5.912393e-18 4.926994e-19
13 7928630 7906662 NM_016406 UFC1 link to infopage 0.770619 7.111864e-22 1.232273e-17 9.479021e-19
14 7928630 8151621 AF495523 REXO1L1 link to infopage -0.765433 1.946406e-21 3.372538e-17 2.408956e-18
15 7928630 8151613 AF495523 REXO1L1 link to infopage -0.765433 1.946406e-21 3.372538e-17 2.248359e-18
16 7928630 8151605 AF495523 REXO1L1 link to infopage -0.765433 1.946406e-21 3.372538e-17 2.107837e-18
17 7928630 8151617 AF495523 REXO1L1 link to infopage -0.765433 1.946406e-21 3.372538e-17 1.983846e-18
18 7928630 8151625 AF495523 REXO1L1 link to infopage -0.765433 1.946406e-21 3.372538e-17 1.873632e-18
19 7928630 8168280 NM_001145408 NONO link to infopage 0.764128 2.497612e-21 4.327613e-17 2.277691e-18
20 7928630 8049574 NM_080678 UBE2F link to infopage 0.760894 4.601016e-21 7.972180e-17 3.986090e-18
21 7928630 7955896 NM_016057 COPZ1 link to infopage 0.760507 4.947033e-21 8.571725e-17 4.081774e-18
22 7928630 7913256 NM_005216 DDOST link to infopage 0.760159 5.279472e-21 9.147741e-17 4.158064e-18
23 7928630 8055261 NM_032144 RAB6C link to infopage 0.758961 6.598539e-21 1.143329e-16 4.970995e-18
24 7928630 8156750 NM_006401 ANP32B link to infopage 0.758855 6.729593e-21 1.166037e-16 4.858486e-18
25 7928630 8134699 NM_006833 COPS6 link to infopage 0.757478 8.681722e-21 1.504282e-16 6.017128e-18
26 7928630 8110803 NM_030782 CLPTM1L link to infopage 0.756365 1.065304e-20 1.845853e-16 7.099435e-18
27 7928630 8039961 NR_024080 ACP1 link to infopage 0.756181 1.101807e-20 1.909101e-16 7.070744e-18
28 7928630 7948534 NM_001923 DDB1 link to infopage 0.753678 1.737926e-20 3.011304e-16 1.075466e-17
29 7928630 8050908 NM_000182 HADHA link to infopage 0.753048 1.947312e-20 3.374108e-16 1.163485e-17
30 7928630 8131111 NM_001037283 EIF3B link to infopage 0.751885 2.400684e-20 4.159665e-16 1.386555e-17
31 7928630 8137252 NM_130759 GIMAP1 link to infopage 0.751862 2.410729e-20 4.177069e-16 1.347442e-17
32 7928630 8164155 NM_001123355 PPP6C link to infopage 0.748088 4.717013e-20 8.173168e-16 2.554115e-17
33 7928630 7898211 NM_032341 DDI2 link to infopage 0.747085 5.626533e-20 9.749093e-16 2.954271e-17
34 7928630 7946439 NM_020644 TMEM9B link to infopage 0.746962 5.749770e-20 9.962627e-16 2.930184e-17
35 7928630 7964466 NM_006400 DCTN2 link to infopage 0.745713 7.152906e-20 1.239384e-15 3.541097e-17
36 7928630 8072153 NM_173510 CCDC117 link to infopage 0.743383 1.071327e-19 1.856288e-15 5.156355e-17
37 7928630 8117888 NM_006325 RAN link to infopage 0.743088 1.127189e-19 1.953081e-15 5.278596e-17
38 7928630 8132070 NM_002047 GARS link to infopage 0.742796 1.185252e-19 2.053685e-15 5.404435e-17
39 7928630 7910229 NM_001024226 ARF1 link to infopage 0.741627 1.448377e-19 2.509603e-15 6.434879e-17
40 7928630 8123148 NM_014161 MRPL18 link to infopage 0.740645 1.712702e-19 2.967599e-15 7.418998e-17
41 7928630 8133434 NM_022170 EIF4H link to infopage 0.740469 1.764753e-19 3.057787e-15 7.458018e-17
42 7928630 7914563 NM_003680 YARS link to infopage 0.740038 1.898838e-19 3.290116e-15 7.833609e-17
43 7928630 8005512 NM_002767 PRPSAP2 link to infopage 0.739243 2.172826e-19 3.764855e-15 8.755477e-17
44 7928630 7916590 NM_001625 AK2 link to infopage 0.738502 2.462380e-19 4.266566e-15 9.696741e-17
45 7928630 8159642 NM_006088 TUBB2C link to infopage 0.738169 2.604835e-19 4.513398e-15 1.002977e-16
46 7928630 8139706 NM_014302 SEC61G link to infopage 0.737716 2.811027e-19 4.870666e-15 1.058840e-16
47 7928630 7967976 NM_005870 SAP18 link to infopage 0.737164 3.083621e-19 5.342990e-15 1.136806e-16
48 7928630 8144669 NM_004462 FDFT1 link to infopage 0.736445 3.478149e-19 6.026589e-15 1.255539e-16
49 7928630 8073192 NM_006003 UQCRFS1 link to infopage 0.736292 3.568180e-19 6.182586e-15 1.261752e-16
50 7928630 8085263 NM_018447 TMEM111 link to infopage 0.735843 3.845064e-19 6.662343e-15 1.332469e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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