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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
13675 8034420 NM_000528 MAN2B1 link to infopage mannosidase, alpha, class 2B, member 1

Fetching correlation data, please wait...
Getting list of correlations for id 13675.
Getting list of p-values for id 13675.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.117 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8034420 8019250 NM_000918 P4HB link to infopage 0.801867 8.934273e-25 1.548041e-20 1.548041e-20
2 8034420 8132592 NM_002541 OGDH link to infopage 0.781563 7.770370e-23 1.346372e-18 6.731860e-19
3 8034420 8176026 NM_001456 FLNA link to infopage 0.774192 3.499790e-22 6.064086e-18 2.021362e-18
4 8034420 7990151 NM_182470 PKM2 link to infopage 0.771405 6.091607e-22 1.055493e-17 2.638732e-18
5 8034420 8139433 NM_033054 MYO1G link to infopage 0.770103 7.870625e-22 1.363743e-17 2.727486e-18
6 8034420 7900030 NM_012199 EIF2C1 link to infopage 0.757250 9.053703e-21 1.568735e-16 2.614559e-17
7 8034420 8086028 NM_000404 GLB1 link to infopage 0.756098 1.118701e-20 1.938374e-16 2.769105e-17
8 8034420 8015460 NM_001096 ACLY link to infopage 0.746839 5.874390e-20 1.017856e-15 1.272320e-16
9 8034420 8045289 NM_012249 RHOQ link to infopage 0.743455 1.058112e-19 1.833390e-15 2.037100e-16
10 8034420 8084439 NM_182917 EIF4G1 link to infopage 0.741267 1.540208e-19 2.668718e-15 2.668718e-16
11 8034420 8032418 NM_003938 AP3D1 link to infopage 0.741145 1.572684e-19 2.724989e-15 2.477263e-16
12 8034420 8030049 NM_017457 CYTH2 link to infopage 0.732172 7.052418e-19 1.221972e-14 1.018310e-15
13 8034420 8025741 NM_001005360 DNM2 link to infopage 0.732044 7.202109e-19 1.247909e-14 9.599303e-16
14 8034420 8024019 NM_002819 PTBP1 link to infopage 0.729148 1.153908e-18 1.999376e-14 1.428126e-15
15 8034420 7898328 NM_001114600 C1orf144 link to infopage 0.727912 1.408349e-18 2.440246e-14 1.626831e-15
16 8034420 8024358 NM_001319 CSNK1G2 link to infopage 0.724182 2.553133e-18 4.423814e-14 2.764884e-15
17 8034420 8037005 NM_000660 TGFB1 link to infopage 0.720009 4.910661e-18 8.508702e-14 5.005119e-15
18 8034420 7940869 NM_178443 FERMT3 link to infopage 0.717365 7.386662e-18 1.279887e-13 7.110483e-15
19 8034420 8019211 NM_017921 NPLOC4 link to infopage 0.715094 1.045208e-17 1.811032e-13 9.531750e-15
20 8034420 7995492 NM_001114 ADCY7 link to infopage 0.714104 1.214721e-17 2.104747e-13 1.052374e-14
21 8034420 7970287 NM_005561 LAMP1 link to infopage 0.713322 1.367016e-17 2.368628e-13 1.127918e-14
22 8034420 8011759 NM_005022 PFN1 link to infopage 0.713304 1.370794e-17 2.375175e-13 1.079625e-14
23 8034420 7950473 NM_004041 ARRB1 link to infopage 0.710012 2.245063e-17 3.890022e-13 1.691314e-14
24 8034420 7965480 NM_002629 PGAM1 link to infopage 0.709137 2.556667e-17 4.429937e-13 1.845807e-14
25 8034420 7949496 NM_005507 CFL1 link to infopage 0.704943 4.736437e-17 8.206825e-13 3.282730e-14
26 8034420 8016099 NM_004247 EFTUD2 link to infopage 0.700827 8.583591e-17 1.487279e-12 5.720303e-14
27 8034420 8164883 NM_033161 SURF4 link to infopage 0.699819 9.914260e-17 1.717844e-12 6.362385e-14
28 8034420 8150112 NM_000637 GSR link to infopage 0.699464 1.042790e-16 1.806843e-12 6.453010e-14
29 8034420 8138773 NM_022170 EIF4H link to infopage 0.697475 1.382763e-16 2.395913e-12 8.261770e-14
30 8034420 7964466 NM_006400 DCTN2 link to infopage 0.697398 1.397812e-16 2.421989e-12 8.073298e-14
31 8034420 8003180 NM_001145548 ZDHHC7 link to infopage 0.696553 1.574732e-16 2.728538e-12 8.801736e-14
32 8034420 7937175 NM_006659 TUBGCP2 link to infopage 0.692980 2.594503e-16 4.495496e-12 1.404842e-13
33 8034420 8173729 NM_001029891 PGAM4 link to infopage 0.692007 2.968519e-16 5.143553e-12 1.558652e-13
34 8034420 8176282 NM_001029891 PGAM4 link to infopage 0.692007 2.968519e-16 5.143553e-12 1.512810e-13
35 8034420 7948864 NM_003164 STX5 link to infopage 0.690401 3.703425e-16 6.416925e-12 1.833407e-13
36 8034420 8072687 NM_006739 MCM5 link to infopage 0.689011 4.479350e-16 7.761369e-12 2.155936e-13
37 8034420 8014189 NM_057178 RFFL link to infopage 0.688870 4.566264e-16 7.911965e-12 2.138369e-13
38 8034420 7945275 NM_052875 VPS26B link to infopage 0.688254 4.966129e-16 8.604811e-12 2.264424e-13
39 8034420 7929624 NM_002629 PGAM1 link to infopage 0.685783 6.940063e-16 1.202505e-11 3.083345e-13
40 8034420 8028524 NM_004924 ACTN4 link to infopage 0.685086 7.622758e-16 1.320795e-11 3.301988e-13
41 8034420 7958152 NM_002629 PGAM1 link to infopage 0.684610 8.124768e-16 1.407778e-11 3.433606e-13
42 8034420 8049246 NM_001017915 INPP5D link to infopage 0.684006 8.809866e-16 1.526486e-11 3.634489e-13
43 8034420 8006984 NM_002809 PSMD3 link to infopage 0.683981 8.840016e-16 1.531710e-11 3.562115e-13
44 8034420 8073192 NM_006003 UQCRFS1 link to infopage 0.683298 9.683789e-16 1.677910e-11 3.813432e-13
45 8034420 7941478 NM_005146 SART1 link to infopage 0.681882 1.169110e-15 2.025717e-11 4.501593e-13
46 8034420 7976876 NM_001376 DYNC1H1 link to infopage 0.681242 1.272606e-15 2.205044e-11 4.793574e-13
47 8034420 8029029 NM_007040 HNRNPUL1 link to infopage 0.680547 1.395083e-15 2.417261e-11 5.143108e-13
48 8034420 8013696 NM_014680 KIAA0100 link to infopage 0.679993 1.500733e-15 2.600319e-11 5.417332e-13
49 8034420 8076403 NM_000262 NAGA link to infopage 0.679815 1.536327e-15 2.661993e-11 5.432639e-13
50 8034420 8099340 NM_017491 WDR1 link to infopage 0.678656 1.789015e-15 3.099826e-11 6.199653e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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