[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
15395	8025741	NM_001005360	DNM2		dynamin 2

Fetching correlation data, please wait...
Getting list of correlations for id 15395.
Getting list of p-values for id 15395.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.138 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8025741	8132592	NM_002541	OGDH	0.783321	5.380366e-23	9.322560e-19	9.322560e-19
2	8025741	8006820	NM_006148	LASP1	0.779362	1.225193e-22	2.122892e-18	1.061446e-18
3	8025741	8014189	NM_057178	RFFL	0.771571	5.894664e-22	1.021368e-17	3.404562e-18
4	8025741	8017675	NR_024386	PLEKHM1P	0.765739	1.835779e-21	3.180854e-17	7.952134e-18
5	8025741	7941797	NM_001619	ADRBK1	0.765439	1.944502e-21	3.369239e-17	6.738478e-18
6	8025741	8115783	NM_005990	STK10	0.760146	5.292047e-21	9.169529e-17	1.528255e-17
7	8025741	8019463	NM_139062	CSNK1D	0.758294	7.467103e-21	1.293825e-16	1.848321e-17
8	8025741	7986214	NM_013272	SLCO3A1	0.757081	9.340210e-21	1.618378e-16	2.022973e-17
9	8025741	8011759	NM_005022	PFN1	0.756440	1.050689e-20	1.820528e-16	2.022809e-17
10	8025741	8003773	NM_015085	RAP1GAP2	0.748267	4.570227e-20	7.918832e-16	7.918832e-17
11	8025741	8030049	NM_017457	CYTH2	0.747898	4.876940e-20	8.450273e-16	7.682067e-17
12	8025741	8176133	NM_000402	G6PD	0.745482	7.445987e-20	1.290166e-15	1.075138e-16
13	8025741	8024358	NM_001319	CSNK1G2	0.743732	1.008601e-19	1.747603e-15	1.344310e-16
14	8025741	8028524	NM_004924	ACTN4	0.743242	1.097674e-19	1.901940e-15	1.358529e-16
15	8025741	8075728	NM_002473	MYH9	0.739379	2.123287e-19	3.679020e-15	2.452680e-16
16	8025741	7970287	NM_005561	LAMP1	0.738857	2.319450e-19	4.018911e-15	2.511819e-16
17	8025741	7897877	NM_001066	TNFRSF1B	0.738706	2.379380e-19	4.122752e-15	2.425148e-16
18	8025741	8172827	NM_004187	KDM5C	0.736904	3.221032e-19	5.581083e-15	3.100602e-16
19	8025741	8007757	NM_005892	FMNL1	0.735237	4.253527e-19	7.370087e-15	3.878993e-16
20	8025741	8034420	NM_000528	MAN2B1	0.732044	7.202109e-19	1.247909e-14	6.239547e-16
21	8025741	8033605	NM_012335	MYO1F	0.731671	7.655027e-19	1.326387e-14	6.316127e-16
22	8025741	7899394	NM_001105556	C1orf38	0.731615	7.725660e-19	1.338625e-14	6.084660e-16
23	8025741	8074647	NM_058004	PI4KA	0.730851	8.752445e-19	1.516536e-14	6.593636e-16
24	8025741	8145490	NM_173174	PTK2B	0.730320	9.541413e-19	1.653241e-14	6.888503e-16
25	8025741	7934733	NM_145869	ANXA11	0.728942	1.192804e-18	2.066772e-14	8.267087e-16
26	8025741	7900030	NM_012199	EIF2C1	0.728885	1.203894e-18	2.085987e-14	8.023025e-16
27	8025741	7949496	NM_005507	CFL1	0.727716	1.453424e-18	2.518347e-14	9.327213e-16
28	8025741	8049246	NM_001017915	INPP5D	0.727532	1.497047e-18	2.593933e-14	9.264046e-16
29	8025741	7909236	NM_004759	MAPKAPK2	0.725008	2.239590e-18	3.880537e-14	1.338116e-15
30	8025741	7997427	NM_198390	CMIP	0.720814	4.332041e-18	7.506128e-14	2.502043e-15
31	8025741	8162236	NM_006378	SEMA4D	0.720213	4.757042e-18	8.242527e-14	2.658880e-15
32	8025741	7966127	NM_003006	SELPLG	0.717116	7.675219e-18	1.329885e-13	4.155891e-15
33	8025741	8136589	ENST00000410791		-0.715943	9.183455e-18	1.591217e-13	4.821870e-15
34	8025741	8176026	NM_001456	FLNA	0.715603	9.672530e-18	1.675959e-13	4.929292e-15
35	8025741	8053901	NM_017849	TMEM127	0.714239	1.190114e-17	2.062110e-13	5.891744e-15
36	8025741	8026638	NM_004145	MYO9B	0.713783	1.275173e-17	2.209493e-13	6.137481e-15
37	8025741	8019250	NM_000918	P4HB	0.713127	1.407893e-17	2.439456e-13	6.593123e-15
38	8025741	8167797	NM_019067	GNL3L	0.711694	1.746480e-17	3.026127e-13	7.963491e-15
39	8025741	8169806			-0.711606	1.769602e-17	3.066189e-13	7.862022e-15
40	8025741	7996976	NM_007014	WWP2	0.710810	1.993355e-17	3.453887e-13	8.634718e-15
41	8025741	8007212	NM_003152	STAT5A	0.709847	2.301004e-17	3.986949e-13	9.724266e-15
42	8025741	7923659	NM_032833	PPP1R15B	0.709450	2.440987e-17	4.229498e-13	1.007023e-14
43	8025741	7905789	NM_000565	IL6R	0.707855	3.090379e-17	5.354700e-13	1.245279e-14
44	8025741	8079950	NM_002070	GNAI2	0.707417	3.296767e-17	5.712308e-13	1.298252e-14
45	8025741	8163569	NM_030767	AKNA	0.704400	5.125889e-17	8.881627e-13	1.973695e-14
46	8025741	7921014	NM_005920	MEF2D	0.703660	5.707284e-17	9.889010e-13	2.149785e-14
47	8025741	8066848	NM_020820	PREX1	0.702353	6.893198e-17	1.194384e-12	2.541243e-14
48	8025741	7906576	NM_015331	NCSTN	0.701838	7.423924e-17	1.286343e-12	2.679882e-14
49	8025741	7995492	NM_001114	ADCY7	0.700616	8.847364e-17	1.532983e-12	3.128536e-14
50	8025741	7967002	NM_001080855	PXN	0.698932	1.124835e-16	1.949001e-12	3.898002e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
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