[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
User requested variable id 13776.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
13776	7941797	NM_001619	ADRBK1		adrenergic, beta, receptor kinase 1

Fetching correlation data, please wait...
Getting list of correlations for id 13776.
Getting list of p-values for id 13776.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.098 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7941797	8079950	NM_002070	GNAI2	0.841039	3.056227e-29	5.295524e-25	5.295524e-25
2	7941797	7950197	NM_015242	ARAP1	0.839141	5.351388e-29	9.272351e-25	4.636175e-25
3	7941797	8006820	NM_006148	LASP1	0.817776	1.850675e-26	3.206665e-22	1.068888e-22
4	7941797	8003773	NM_015085	RAP1GAP2	0.808943	1.665901e-25	2.886507e-21	7.216268e-22
5	7941797	7920877	NM_004723	ARHGEF2	0.808566	1.825168e-25	3.162468e-21	6.324936e-22
6	7941797	8170891	NM_001493	GDI1	0.808517	1.846939e-25	3.200190e-21	5.333651e-22
7	7941797	8115783	NM_005990	STK10	0.806682	2.871079e-25	4.974719e-21	7.106742e-22
8	7941797	8013191	NM_002018	FLII	0.804128	5.263830e-25	9.120638e-21	1.140080e-21
9	7941797	8026638	NM_004145	MYO9B	0.799832	1.430417e-24	2.478484e-20	2.753871e-21
10	7941797	8004030	NM_015528	RNF167	0.794991	4.288216e-24	7.430192e-20	7.430192e-21
11	7941797	7947681	NM_004308	ARHGAP1	0.792303	7.789910e-24	1.349758e-19	1.227052e-20
12	7941797	7905631	NM_023015	INTS3	0.790055	1.274800e-23	2.208846e-19	1.840705e-20
13	7941797	8132539	NM_014063	DBNL	0.789990	1.292925e-23	2.240251e-19	1.723270e-20
14	7941797	7964203	NM_013449	BAZ2A	0.789266	1.513109e-23	2.621764e-19	1.872688e-20
15	7941797	7997427	NM_198390	CMIP	0.788365	1.838492e-23	3.185555e-19	2.123703e-20
16	7941797	8024170	NM_012292	HMHA1	0.786742	2.605908e-23	4.515257e-19	2.822036e-20
17	7941797	8082478	NM_016128	COPG	0.786453	2.771921e-23	4.802908e-19	2.825240e-20
18	7941797	8019463	NM_139062	CSNK1D	0.785096	3.700114e-23	6.411188e-19	3.561771e-20
19	7941797	7921752	NM_001025598	ARHGAP30	0.783485	5.198942e-23	9.008207e-19	4.741162e-20
20	7941797	8009183	NM_203351	MAP3K3	0.783289	5.416859e-23	9.385791e-19	4.692896e-20
21	7941797	7949264	NM_006795	EHD1	0.782826	5.969327e-23	1.034305e-18	4.925263e-20
22	7941797	8024358	NM_001319	CSNK1G2	0.781327	8.160930e-23	1.414044e-18	6.427474e-20
23	7941797	8044584	NM_012455	PSD4	0.778942	1.335695e-22	2.314358e-18	1.006243e-19
24	7941797	8132592	NM_002541	OGDH	0.777949	1.636844e-22	2.836159e-18	1.181733e-19
25	7941797	7897482	NM_005026	PIK3CD	0.776263	2.305947e-22	3.995515e-18	1.598206e-19
26	7941797	8125360	NM_002586	PBX2	0.775505	2.688007e-22	4.657510e-18	1.791350e-19
27	7941797	8018324	NM_138619	GGA3	0.774675	3.176147e-22	5.503310e-18	2.038263e-19
28	7941797	7964579	NM_005730	CTDSP2	0.773832	3.760775e-22	6.516296e-18	2.327248e-19
29	7941797	8036720	NM_019088	PAF1	0.773506	4.014028e-22	6.955106e-18	2.398312e-19
30	7941797	7905789	NM_000565	IL6R	0.771952	5.466821e-22	9.472361e-18	3.157454e-19
31	7941797	7996976	NM_007014	WWP2	0.771395	6.103928e-22	1.057628e-17	3.411702e-19
32	7941797	7898161	NM_024329	EFHD2	0.769637	8.622537e-22	1.494027e-17	4.668834e-19
33	7941797	8017675	NR_024386	PLEKHM1P	0.767414	1.329265e-21	2.303218e-17	6.979449e-19
34	7941797	7905028	CR541728	LSP1	0.766513	1.581702e-21	2.740615e-17	8.060631e-19
35	7941797	7934733	NM_145869	ANXA11	0.766220	1.673514e-21	2.899698e-17	8.284850e-19
36	7941797	8080487	NM_006254	PRKCD	0.765639	1.871058e-21	3.241981e-17	9.005504e-19
37	7941797	8025741	NM_001005360	DNM2	0.765439	1.944502e-21	3.369239e-17	9.106052e-19
38	7941797	7998033	NM_014972	TCF25	0.764934	2.141473e-21	3.710531e-17	9.764555e-19
39	7941797	7953569	NM_080549	PTPN6	0.764740	2.222600e-21	3.851099e-17	9.874614e-19
40	7941797	8077550	NM_001077525	MTMR14	0.763368	2.885755e-21	5.000148e-17	1.250037e-18
41	7941797	8034762	NM_002730	PRKACA	0.762905	3.150700e-21	5.459219e-17	1.331517e-18
42	7941797	8066848	NM_020820	PREX1	0.762892	3.158099e-21	5.472038e-17	1.302866e-18
43	7941797	8049317	NM_152879	DGKD	0.762577	3.351957e-21	5.807936e-17	1.350683e-18
44	7941797	8013696	NM_014680	KIAA0100	0.762551	3.368367e-21	5.836370e-17	1.326448e-18
45	7941797	8083221	NM_002586	PBX2	0.762245	3.568557e-21	6.183239e-17	1.374053e-18
46	7941797	8003180	NM_001145548	ZDHHC7	0.760655	4.811823e-21	8.337447e-17	1.812488e-18
47	7941797	8079462	NM_015175	NBEAL2	0.760621	4.842471e-21	8.390549e-17	1.785223e-18
48	7941797	8161056	NM_006289	TLN1	0.760421	5.027269e-21	8.710749e-17	1.814739e-18
49	7941797	8004431	NM_000937	POLR2A	0.759916	5.523800e-21	9.571088e-17	1.953283e-18
50	7941797	8015955	NM_020218	ATXN7L3	0.759764	5.682919e-21	9.846793e-17	1.969359e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
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