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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 14632.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
14632 8004030 NM_015528 RNF167 link to infopage ring finger protein 167

Fetching correlation data, please wait...
Getting list of correlations for id 14632.
Getting list of p-values for id 14632.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.113 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8004030 8116020 NM_006816 LMAN2 link to infopage 0.804495 4.827219e-25 8.364122e-21 8.364122e-21
2 8004030 7978208 NM_012461 TINF2 link to infopage 0.799761 1.453891e-24 2.519158e-20 1.259579e-20
3 8004030 8119648 NM_057161 KLHDC3 link to infopage 0.797983 2.183167e-24 3.782773e-20 1.260924e-20
4 8004030 7949264 NM_006795 EHD1 link to infopage 0.795656 3.693981e-24 6.400561e-20 1.600140e-20
5 8004030 7941797 NM_001619 ADRBK1 link to infopage 0.794991 4.288216e-24 7.430192e-20 1.486038e-20
6 8004030 7904974 NR_003242 C1orf152 link to infopage 0.790591 1.133957e-23 1.964808e-19 3.274680e-20
7 8004030 8011759 NM_005022 PFN1 link to infopage 0.788679 1.718164e-23 2.977063e-19 4.252947e-20
8 8004030 7920877 NM_004723 ARHGEF2 link to infopage 0.781063 8.622152e-23 1.493960e-18 1.867450e-19
9 8004030 8009932 NM_013260 SAP30BP link to infopage 0.780088 1.054996e-22 1.827991e-18 2.031101e-19
10 8004030 8013191 NM_002018 FLII link to infopage 0.778747 1.390376e-22 2.409105e-18 2.409105e-19
11 8004030 8026548 NM_001130524 AP1M1 link to infopage 0.778314 1.519081e-22 2.632111e-18 2.392828e-19
12 8004030 7970287 NM_005561 LAMP1 link to infopage 0.777876 1.661571e-22 2.879003e-18 2.399169e-19
13 8004030 7921752 NM_001025598 ARHGAP30 link to infopage 0.777351 1.849044e-22 3.203838e-18 2.464491e-19
14 8004030 7898161 NM_024329 EFHD2 link to infopage 0.776563 2.170243e-22 3.760380e-18 2.685985e-19
15 8004030 7994756 NM_002720 PPP4C link to infopage 0.775279 2.813133e-22 4.874316e-18 3.249544e-19
16 8004030 8173729 NM_001029891 PGAM4 link to infopage 0.768262 1.127466e-21 1.953560e-17 1.220975e-18
17 8004030 8176282 NM_001029891 PGAM4 link to infopage 0.768262 1.127466e-21 1.953560e-17 1.149153e-18
18 8004030 8015955 NM_020218 ATXN7L3 link to infopage 0.766720 1.519818e-21 2.633389e-17 1.462994e-18
19 8004030 7967841 NM_001161344 CHFR link to infopage 0.763974 2.572110e-21 4.456695e-17 2.345629e-18
20 8004030 7958152 NM_002629 PGAM1 link to infopage 0.763433 2.850686e-21 4.939384e-17 2.469692e-18
21 8004030 7929624 NM_002629 PGAM1 link to infopage 0.762149 3.634013e-21 6.296655e-17 2.998407e-18
22 8004030 8025076 NM_005428 VAV1 link to infopage 0.761691 3.961389e-21 6.863899e-17 3.119954e-18
23 8004030 8134552 NM_005720 ARPC1B link to infopage 0.761498 4.108067e-21 7.118048e-17 3.094804e-18
24 8004030 8040018 NM_016030 TTC15 link to infopage 0.760717 4.756330e-21 8.241293e-17 3.433872e-18
25 8004030 8024358 NM_001319 CSNK1G2 link to infopage 0.757733 8.282252e-21 1.435066e-16 5.740264e-18
26 8004030 7965480 NM_002629 PGAM1 link to infopage 0.756898 9.659814e-21 1.673756e-16 6.437523e-18
27 8004030 8153819 NM_138496 CYHR1 link to infopage 0.756013 1.136142e-20 1.968593e-16 7.291084e-18
28 8004030 8099340 NM_017491 WDR1 link to infopage 0.754395 1.525934e-20 2.643986e-16 9.442808e-18
29 8004030 8115783 NM_005990 STK10 link to infopage 0.753867 1.679393e-20 2.909884e-16 1.003408e-17
30 8004030 7966929 NM_006861 RAB35 link to infopage 0.752976 1.972823e-20 3.418310e-16 1.139437e-17
31 8004030 8082478 NM_016128 COPG link to infopage 0.750723 2.955705e-20 5.121351e-16 1.652049e-17
32 8004030 7928369 NM_004922 SEC24C link to infopage 0.750143 3.277614e-20 5.679122e-16 1.774726e-17
33 8004030 8031536 NM_007279 U2AF2 link to infopage 0.750090 3.308528e-20 5.732686e-16 1.737178e-17
34 8004030 8079950 NM_002070 GNAI2 link to infopage 0.748962 4.042164e-20 7.003857e-16 2.059958e-17
35 8004030 8013696 NM_014680 KIAA0100 link to infopage 0.748788 4.168219e-20 7.222273e-16 2.063506e-17
36 8004030 8012099 NM_024297 PHF23 link to infopage 0.743330 1.081178e-19 1.873356e-15 5.203768e-17
37 8004030 7948864 NM_003164 STX5 link to infopage 0.742526 1.241619e-19 2.151353e-15 5.814468e-17
38 8004030 7920515 NM_017582 UBE2Q1 link to infopage 0.742088 1.338387e-19 2.319023e-15 6.102692e-17
39 8004030 8117760 NM_001098479 HLA-F link to infopage 0.739782 1.983192e-19 3.436276e-15 8.810965e-17
40 8004030 8110803 NM_030782 CLPTM1L link to infopage 0.738488 2.468203e-19 4.276656e-15 1.069164e-16
41 8004030 8179019 NM_018950 HLA-F link to infopage 0.737913 2.719164e-19 4.711496e-15 1.149145e-16
42 8004030 7964466 NM_006400 DCTN2 link to infopage 0.735759 3.899286e-19 6.756293e-15 1.608641e-16
43 8004030 8034762 NM_002730 PRKACA link to infopage 0.735716 3.927474e-19 6.805134e-15 1.582589e-16
44 8004030 7998033 NM_014972 TCF25 link to infopage 0.735444 4.109349e-19 7.120269e-15 1.618243e-16
45 8004030 7906235 NM_005973 PRCC link to infopage 0.735205 4.275690e-19 7.408489e-15 1.646331e-16
46 8004030 8030049 NM_017457 CYTH2 link to infopage 0.735052 4.385881e-19 7.599415e-15 1.652047e-16
47 8004030 8036720 NM_019088 PAF1 link to infopage 0.732372 6.825370e-19 1.182632e-14 2.516238e-16
48 8004030 8177717 NM_018950 HLA-F link to infopage 0.731941 7.325007e-19 1.269204e-14 2.644175e-16
49 8004030 8003322 NM_000101 CYBA link to infopage 0.731770 7.532357e-19 1.305132e-14 2.663534e-16
50 8004030 8013486 NM_015276 USP22 link to infopage 0.730778 8.855997e-19 1.534479e-14 3.068957e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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