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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
6699 8015955 NM_020218 ATXN7L3 link to infopage ataxin 7-like 3

Fetching correlation data, please wait...
Getting list of correlations for id 6699.
Getting list of p-values for id 6699.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.127 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8015955 8082478 NM_016128 COPG link to infopage 0.799476 1.552022e-24 2.689189e-20 2.689189e-20
2 8015955 7921752 NM_001025598 ARHGAP30 link to infopage 0.797060 2.691956e-24 4.664353e-20 2.332176e-20
3 8015955 8009183 NM_203351 MAP3K3 link to infopage 0.782416 6.503745e-23 1.126904e-18 3.756346e-19
4 8015955 8115783 NM_005990 STK10 link to infopage 0.781435 7.981084e-23 1.382882e-18 3.457206e-19
5 8015955 8099340 NM_017491 WDR1 link to infopage 0.775970 2.447044e-22 4.239992e-18 8.479985e-19
6 8015955 7967841 NM_001161344 CHFR link to infopage 0.767256 1.370390e-21 2.374475e-17 3.957459e-18
7 8015955 8025076 NM_005428 VAV1 link to infopage 0.767207 1.383539e-21 2.397259e-17 3.424655e-18
8 8015955 8004030 NM_015528 RNF167 link to infopage 0.766720 1.519818e-21 2.633389e-17 3.291736e-18
9 8015955 7956443 NM_004990 MARS link to infopage 0.765346 1.979373e-21 3.429659e-17 3.810732e-18
10 8015955 8013191 NM_002018 FLII link to infopage 0.763375 2.881731e-21 4.993176e-17 4.993176e-18
11 8015955 8006820 NM_006148 LASP1 link to infopage 0.762583 3.348326e-21 5.801645e-17 5.274223e-18
12 8015955 7922669 NM_005819 STX6 link to infopage 0.762178 3.614330e-21 6.262549e-17 5.218791e-18
13 8015955 8044584 NM_012455 PSD4 link to infopage 0.761632 4.005616e-21 6.940531e-17 5.338870e-18
14 8015955 7925851 NM_014023 WDR37 link to infopage 0.761031 4.484587e-21 7.770444e-17 5.550317e-18
15 8015955 8079950 NM_002070 GNAI2 link to infopage 0.760804 4.679164e-21 8.107587e-17 5.405058e-18
16 8015955 8011542 NM_015113 ZZEF1 link to infopage 0.759863 5.579289e-21 9.667234e-17 6.042021e-18
17 8015955 7941797 NM_001619 ADRBK1 link to infopage 0.759764 5.682919e-21 9.846793e-17 5.792231e-18
18 8015955 8018364 NM_002086 GRB2 link to infopage 0.756315 1.075091e-20 1.862810e-16 1.034895e-17
19 8015955 8160914 NM_007126 VCP link to infopage 0.754310 1.549823e-20 2.685378e-16 1.413357e-17
20 8015955 7940051 NM_015457 ZDHHC5 link to infopage 0.751079 2.773868e-20 4.806280e-16 2.403140e-17
21 8015955 8176282 NM_001029891 PGAM4 link to infopage 0.750776 2.927822e-20 5.073037e-16 2.415732e-17
22 8015955 8173729 NM_001029891 PGAM4 link to infopage 0.750776 2.927822e-20 5.073037e-16 2.305926e-17
23 8015955 7928369 NM_004922 SEC24C link to infopage 0.750151 3.272719e-20 5.670640e-16 2.465495e-17
24 8015955 8080487 NM_006254 PRKCD link to infopage 0.748854 4.120156e-20 7.138995e-16 2.974581e-17
25 8015955 7958152 NM_002629 PGAM1 link to infopage 0.748471 4.408865e-20 7.639240e-16 3.055696e-17
26 8015955 7909214 NM_182663 RASSF5 link to infopage 0.745755 7.100429e-20 1.230291e-15 4.731890e-17
27 8015955 7956593 NM_006812 OS9 link to infopage 0.744743 8.466822e-20 1.467046e-15 5.433505e-17
28 8015955 8077550 NM_001077525 MTMR14 link to infopage 0.743810 9.951095e-20 1.724226e-15 6.157951e-17
29 8015955 7913169 NM_004930 CAPZB link to infopage 0.743369 1.073870e-19 1.860695e-15 6.416190e-17
30 8015955 7934477 NM_172171 CAMK2G link to infopage 0.742829 1.178535e-19 2.042047e-15 6.806825e-17
31 8015955 7999233 NM_032569 GLYR1 link to infopage 0.741862 1.391333e-19 2.410762e-15 7.776653e-17
32 8015955 7923659 NM_032833 PPP1R15B link to infopage 0.741852 1.393560e-19 2.414622e-15 7.545692e-17
33 8015955 8170891 NM_001493 GDI1 link to infopage 0.740779 1.674004e-19 2.900546e-15 8.789534e-17
34 8015955 8026638 NM_004145 MYO9B link to infopage 0.739471 2.090678e-19 3.622518e-15 1.065446e-16
35 8015955 8146171 NM_001556 IKBKB link to infopage 0.738059 2.653110e-19 4.597044e-15 1.313441e-16
36 8015955 8064191 NM_199360 TPD52L2 link to infopage 0.737863 2.742236e-19 4.751473e-15 1.319854e-16
37 8015955 8153819 NM_138496 CYHR1 link to infopage 0.737579 2.876366e-19 4.983880e-15 1.346995e-16
38 8015955 8148674 NM_139021 MAPK15 link to infopage -0.736902 3.221842e-19 5.582485e-15 1.469075e-16
39 8015955 7963289 NM_016293 BIN2 link to infopage 0.736108 3.679361e-19 6.375229e-15 1.634674e-16
40 8015955 7964203 NM_013449 BAZ2A link to infopage 0.735852 3.839738e-19 6.653114e-15 1.663279e-16
41 8015955 7929624 NM_002629 PGAM1 link to infopage 0.735005 4.420642e-19 7.659647e-15 1.868207e-16
42 8015955 8165911 NM_005647 TBL1X link to infopage 0.734888 4.506782e-19 7.808901e-15 1.859262e-16
43 8015955 7982531 NM_006305 ANP32A link to infopage 0.734797 4.575793e-19 7.928476e-15 1.843832e-16
44 8015955 8003180 NM_001145548 ZDHHC7 link to infopage 0.734336 4.938326e-19 8.556638e-15 1.944691e-16
45 8015955 7953569 NM_080549 PTPN6 link to infopage 0.734080 5.152162e-19 8.927151e-15 1.983811e-16
46 8015955 8158783 NM_005085 NUP214 link to infopage 0.733423 5.742509e-19 9.950046e-15 2.163053e-16
47 8015955 7965480 NM_002629 PGAM1 link to infopage 0.733287 5.872499e-19 1.017528e-14 2.164953e-16
48 8015955 8034762 NM_002730 PRKACA link to infopage 0.732099 7.137928e-19 1.236789e-14 2.576643e-16
49 8015955 8013696 NM_014680 KIAA0100 link to infopage 0.731937 7.330194e-19 1.270103e-14 2.592046e-16
50 8015955 8009932 NM_013260 SAP30BP link to infopage 0.731670 7.656706e-19 1.326677e-14 2.653355e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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