[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
10556 7948864 NM_003164 STX5 link to infopage syntaxin 5

Fetching correlation data, please wait...
Getting list of correlations for id 10556.
Getting list of p-values for id 10556.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.243 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7948864 7964466 NM_006400 DCTN2 link to infopage 0.761790 3.888541e-21 6.737676e-17 6.737676e-17
2 7948864 7965480 NM_002629 PGAM1 link to infopage 0.759379 6.105883e-21 1.057966e-16 5.289831e-17
3 7948864 8030049 NM_017457 CYTH2 link to infopage 0.757838 8.123399e-21 1.407541e-16 4.691805e-17
4 7948864 7978208 NM_012461 TINF2 link to infopage 0.755091 1.344566e-20 2.329730e-16 5.824326e-17
5 7948864 8072687 NM_006739 MCM5 link to infopage 0.751110 2.758267e-20 4.779250e-16 9.558500e-17
6 7948864 7958152 NM_002629 PGAM1 link to infopage 0.750848 2.890598e-20 5.008540e-16 8.347566e-17
7 7948864 7929624 NM_002629 PGAM1 link to infopage 0.750759 2.936924e-20 5.088808e-16 7.269726e-17
8 7948864 7966829 NM_018639 WSB2 link to infopage 0.746350 6.399373e-20 1.108819e-15 1.386024e-16
9 7948864 7999233 NM_032569 GLYR1 link to infopage 0.744252 9.218599e-20 1.597307e-15 1.774785e-16
10 7948864 8004030 NM_015528 RNF167 link to infopage 0.742526 1.241619e-19 2.151353e-15 2.151353e-16
11 7948864 7941797 NM_001619 ADRBK1 link to infopage 0.740370 1.794571e-19 3.109453e-15 2.826775e-16
12 7948864 8116020 NM_006816 LMAN2 link to infopage 0.739938 1.931408e-19 3.346551e-15 2.788793e-16
13 7948864 8110392 NM_017510 TMED9 link to infopage 0.739291 2.155084e-19 3.734113e-15 2.872395e-16
14 7948864 8019250 NM_000918 P4HB link to infopage 0.736633 3.370416e-19 5.839919e-15 4.171371e-16
15 7948864 8132592 NM_002541 OGDH link to infopage 0.731561 7.794777e-19 1.350601e-14 9.004007e-16
16 7948864 8176282 NM_001029891 PGAM4 link to infopage 0.729466 1.095945e-18 1.898944e-14 1.186840e-15
17 7948864 8173729 NM_001029891 PGAM4 link to infopage 0.729466 1.095945e-18 1.898944e-14 1.117026e-15
18 7948864 8011759 NM_005022 PFN1 link to infopage 0.725386 2.109033e-18 3.654322e-14 2.030179e-15
19 7948864 8119648 NM_057161 KLHDC3 link to infopage 0.719223 5.547169e-18 9.611579e-14 5.058726e-15
20 7948864 8139433 NM_033054 MYO1G link to infopage 0.717722 6.993126e-18 1.211699e-13 6.058494e-15
21 7948864 7919564 ENST00000365297 link to infopage -0.715678 9.563183e-18 1.657013e-13 7.890536e-15
22 7948864 8061966 NM_016732 RALY link to infopage 0.715579 9.708636e-18 1.682215e-13 7.646434e-15
23 7948864 7904974 NR_003242 C1orf152 link to infopage 0.714955 1.067455e-17 1.849579e-13 8.041647e-15
24 7948864 8077550 NM_001077525 MTMR14 link to infopage 0.714536 1.137612e-17 1.971141e-13 8.213086e-15
25 7948864 7969372 ENST00000362412 link to infopage -0.712237 1.609740e-17 2.789197e-13 1.115679e-14
26 7948864 8007715 NM_021079 NMT1 link to infopage 0.711236 1.870440e-17 3.240911e-13 1.246504e-14
27 7948864 8019211 NM_017921 NPLOC4 link to infopage 0.711092 1.911086e-17 3.311338e-13 1.226421e-14
28 7948864 7995843 NM_014669 NUP93 link to infopage 0.710723 2.019305e-17 3.498850e-13 1.249589e-14
29 7948864 8099340 NM_017491 WDR1 link to infopage 0.709004 2.607681e-17 4.518329e-13 1.558045e-14
30 7948864 8040018 NM_016030 TTC15 link to infopage 0.707502 3.255618e-17 5.641009e-13 1.880336e-14
31 7948864 7920515 NM_017582 UBE2Q1 link to infopage 0.706073 4.015582e-17 6.957799e-13 2.244451e-14
32 7948864 8145977 NM_021623 PLEKHA2 link to infopage 0.703238 6.066145e-17 1.051081e-12 3.284628e-14
33 7948864 8177717 NM_018950 HLA-F link to infopage 0.702647 6.607257e-17 1.144839e-12 3.469210e-14
34 7948864 8153819 NM_138496 CYHR1 link to infopage 0.702337 6.909246e-17 1.197165e-12 3.521074e-14
35 7948864 8134552 NM_005720 ARPC1B link to infopage 0.701659 7.617891e-17 1.319952e-12 3.771292e-14
36 7948864 8024358 NM_001319 CSNK1G2 link to infopage 0.701398 7.908246e-17 1.370262e-12 3.806283e-14
37 7948864 8179019 NM_018950 HLA-F link to infopage 0.699760 9.997898e-17 1.732336e-12 4.681989e-14
38 7948864 8015955 NM_020218 ATXN7L3 link to infopage 0.699264 1.072938e-16 1.859079e-12 4.892314e-14
39 7948864 7913256 NM_005216 DDOST link to infopage 0.698570 1.184239e-16 2.051931e-12 5.261360e-14
40 7948864 8110803 NM_030782 CLPTM1L link to infopage 0.697913 1.299791e-16 2.252147e-12 5.630369e-14
41 7948864 7941478 NM_005146 SART1 link to infopage 0.697851 1.311152e-16 2.271833e-12 5.541055e-14
42 7948864 8003939 NM_003963 TM4SF5 link to infopage -0.697812 1.318455e-16 2.284487e-12 5.439254e-14
43 7948864 8117760 NM_001098479 HLA-F link to infopage 0.697292 1.419017e-16 2.458731e-12 5.717979e-14
44 7948864 8019762 link to infopage 0.695766 1.758983e-16 3.047789e-12 6.926794e-14
45 7948864 8019772 NM_005782 THOC4 link to infopage 0.693085 2.556956e-16 4.430437e-12 9.845416e-14
46 7948864 8045289 NM_012249 RHOQ link to infopage 0.692858 2.638792e-16 4.572235e-12 9.939642e-14
47 7948864 7915758 NM_021639 GPBP1L1 link to infopage 0.692748 2.679094e-16 4.642065e-12 9.876735e-14
48 7948864 8138773 NM_022170 EIF4H link to infopage 0.692067 2.943778e-16 5.100685e-12 1.062643e-13
49 7948864 8019273 NM_005782 THOC4 link to infopage 0.692053 2.949675e-16 5.110902e-12 1.043041e-13
50 7948864 8132539 NM_014063 DBNL link to infopage 0.691440 3.209865e-16 5.561733e-12 1.112347e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!