[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
14975	7995492	NM_001114	ADCY7		adenylate cyclase 7

Fetching correlation data, please wait...
Getting list of correlations for id 14975.
Getting list of p-values for id 14975.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.147 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7995492	8176026	NM_001456	FLNA	0.816395	2.629771e-26	4.556605e-22	4.556605e-22
2	7995492	8132592	NM_002541	OGDH	0.776901	2.026491e-22	3.511301e-18	1.755650e-18
3	7995492	7994826	NM_002209	ITGAL	0.774739	3.135655e-22	5.433149e-18	1.811050e-18
4	7995492	8003773	NM_015085	RAP1GAP2	0.763549	2.788517e-21	4.831664e-17	1.207916e-17
5	7995492	8139433	NM_033054	MYO1G	0.761144	4.390392e-21	7.607233e-17	1.521447e-17
6	7995492	8032137	NM_001033026	C19orf6	0.755679	1.207761e-20	2.092687e-16	3.487811e-17
7	7995492	8163569	NM_030767	AKNA	0.752645	2.094120e-20	3.628481e-16	5.183544e-17
8	7995492	7941797	NM_001619	ADRBK1	0.752492	2.152532e-20	3.729692e-16	4.662115e-17
9	7995492	8084439	NM_182917	EIF4G1	0.751228	2.700550e-20	4.679242e-16	5.199158e-17
10	7995492	8013696	NM_014680	KIAA0100	0.740112	1.875284e-19	3.249304e-15	3.249304e-16
11	7995492	8172827	NM_004187	KDM5C	0.733974	5.243099e-19	9.084718e-15	8.258835e-16
12	7995492	8011759	NM_005022	PFN1	0.732885	6.274077e-19	1.087109e-14	9.059244e-16
13	7995492	7977511	NM_007110	TEP1	0.730898	8.684642e-19	1.504788e-14	1.157529e-15
14	7995492	8110841	NM_024830	LPCAT1	0.729739	1.048555e-18	1.816832e-14	1.297737e-15
15	7995492	7950473	NM_004041	ARRB1	0.725892	1.946078e-18	3.371970e-14	2.247980e-15
16	7995492	8169859	NM_018990	SASH3	0.723059	3.047907e-18	5.281108e-14	3.300692e-15
17	7995492	7968890	NM_003646	DGKZ	0.721972	3.615354e-18	6.264324e-14	3.684896e-15
18	7995492	8051814	NM_006887	ZFP36L2	0.720095	4.845264e-18	8.395389e-14	4.664105e-15
19	7995492	8034420	NM_000528	MAN2B1	0.714104	1.214721e-17	2.104747e-13	1.107762e-14
20	7995492	8026315	NM_213560	PKN1	0.713557	1.319498e-17	2.286295e-13	1.143147e-14
21	7995492	7995926	NM_032206	NLRC5	0.711321	1.846732e-17	3.199833e-13	1.523730e-14
22	7995492	7944152	NM_001558	IL10RA	0.710491	2.090544e-17	3.622286e-13	1.646493e-14
23	7995492	7998033	NM_014972	TCF25	0.709509	2.419591e-17	4.192426e-13	1.822794e-14
24	7995492	7939767	NM_003682	MADD	0.708250	2.915456e-17	5.051610e-13	2.104838e-14
25	7995492	8032418	NM_003938	AP3D1	0.706630	3.701042e-17	6.412795e-13	2.565118e-14
26	7995492	8093230	NM_001145642	KIAA0226	0.705189	4.569222e-17	7.917092e-13	3.045035e-14
27	7995492	8074647	NM_058004	PI4KA	0.704644	4.946858e-17	8.571420e-13	3.174600e-14
28	7995492	8029147	NM_199002	ARHGEF1	0.703801	5.591811e-17	9.688931e-13	3.460332e-14
29	7995492	8025741	NM_001005360	DNM2	0.700616	8.847364e-17	1.532983e-12	5.286147e-14
30	7995492	7976876	NM_001376	DYNC1H1	0.698705	1.161735e-16	2.012939e-12	6.709796e-14
31	7995492	7945275	NM_052875	VPS26B	0.697598	1.358948e-16	2.354649e-12	7.595642e-14
32	7995492	7994603	NM_001030288	SPN	0.695832	1.742811e-16	3.019769e-12	9.436777e-14
33	7995492	8024358	NM_001319	CSNK1G2	0.693309	2.478421e-16	4.294360e-12	1.301321e-13
34	7995492	7904974	NR_003242	C1orf152	0.690892	3.461799e-16	5.998259e-12	1.764194e-13
35	7995492	7981494	NM_001014432	AKT1	0.689993	3.916210e-16	6.785617e-12	1.938748e-13
36	7995492	8115783	NM_005990	STK10	0.688936	4.525597e-16	7.841502e-12	2.178195e-13
37	7995492	7947681	NM_004308	ARHGAP1	0.688624	4.722217e-16	8.182186e-12	2.211402e-13
38	7995492	8004431	NM_000937	POLR2A	0.688069	5.093142e-16	8.824887e-12	2.322339e-13
39	7995492	7920877	NM_004723	ARHGEF2	0.687376	5.595756e-16	9.695766e-12	2.486094e-13
40	7995492	8017675	NR_024386	PLEKHM1P	0.685331	7.375354e-16	1.277928e-11	3.194819e-13
41	7995492	8019250	NM_000918	P4HB	0.683168	9.853441e-16	1.707306e-11	4.164160e-13
42	7995492	8131143	NM_001040167	LFNG	0.682271	1.110398e-15	1.923987e-11	4.580923e-13
43	7995492	7994506	NM_032815	NFATC2IP	0.682216	1.118514e-15	1.938050e-11	4.507093e-13
44	7995492	8049317	NM_152879	DGKD	0.680052	1.489254e-15	2.580431e-11	5.864615e-13
45	7995492	7941311	NM_153253	SIPA1	0.679951	1.509122e-15	2.614856e-11	5.810791e-13
46	7995492	7897877	NM_001066	TNFRSF1B	0.679197	1.666488e-15	2.887524e-11	6.277226e-13
47	7995492	7912412	NM_004958	MTOR	0.679169	1.672485e-15	2.897915e-11	6.165777e-13
48	7995492	7970287	NM_005561	LAMP1	0.679047	1.699489e-15	2.944704e-11	6.134800e-13
49	7995492	8040753	NM_017727	TMEM214	0.677844	1.989287e-15	3.446838e-11	7.034364e-13
50	7995492	8024019	NM_002819	PTBP1	0.676926	2.242176e-15	3.885018e-11	7.770035e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
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