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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
3298 7963545 NM_175834 KRT79 link to infopage keratin 79

Fetching correlation data, please wait...
Getting list of correlations for id 3298.
Getting list of p-values for id 3298.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.156 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7963545 8032699 NM_015174 ZFR2 link to infopage 0.765808 1.811302e-21 3.138443e-17 3.138443e-17
2 7963545 8153322 NM_015193 ARC link to infopage 0.760061 5.376490e-21 9.315844e-17 4.657922e-17
3 7963545 7997801 NM_013278 IL17C link to infopage 0.748571 4.331582e-20 7.505332e-16 2.501777e-16
4 7963545 8000467 NM_001109763 GSG1L link to infopage 0.744340 9.079500e-20 1.573205e-15 3.933012e-16
5 7963545 8024605 NM_021938 CELF5 link to infopage 0.741660 1.440230e-19 2.495486e-15 4.990971e-16
6 7963545 7968265 NM_000209 PDX1 link to infopage 0.741344 1.520122e-19 2.633915e-15 4.389859e-16
7 7963545 8162472 NM_021570 BARX1 link to infopage 0.739761 1.990296e-19 3.448586e-15 4.926552e-16
8 7963545 7987701 NM_016642 SPTBN5 link to infopage 0.739714 2.006304e-19 3.476323e-15 4.345404e-16
9 7963545 8137151 NM_198455 SSPO link to infopage 0.736027 3.729351e-19 6.461846e-15 7.179829e-16
10 7963545 7995310 ENST00000319817 link to infopage 0.734576 4.746200e-19 8.223741e-15 8.223741e-16
11 7963545 7955578 NM_181711 GRASP link to infopage 0.733109 6.046846e-19 1.047737e-14 9.524882e-16
12 7963545 8038109 NM_017708 FAM83E link to infopage 0.732827 6.333918e-19 1.097478e-14 9.145650e-16
13 7963545 8087145 NM_001407 CELSR3 link to infopage 0.731772 7.530435e-19 1.304798e-14 1.003691e-15
14 7963545 8037785 NM_033258 GNG8 link to infopage 0.729349 1.116875e-18 1.935210e-14 1.382293e-15
15 7963545 8170648 NM_001711 BGN link to infopage 0.728969 1.187658e-18 2.057855e-14 1.371904e-15
16 7963545 8125568 NM_080680 COL11A2 link to infopage 0.728670 1.246496e-18 2.159804e-14 1.349878e-15
17 7963545 8049942 NM_080741 NEU4 link to infopage 0.727725 1.451345e-18 2.514746e-14 1.479262e-15
18 7963545 8165538 NM_001033113 ENTPD8 link to infopage 0.727654 1.468000e-18 2.543604e-14 1.413113e-15
19 7963545 8028407 NM_000540 RYR1 link to infopage 0.727168 1.586816e-18 2.749476e-14 1.447093e-15
20 7963545 8008228 NM_138281 DLX4 link to infopage 0.726731 1.702044e-18 2.949131e-14 1.474565e-15
21 7963545 7977418 NM_001134875 C14orf80 link to infopage 0.725413 2.100246e-18 3.639097e-14 1.732903e-15
22 7963545 7981447 NM_001100119 XRCC3 link to infopage 0.725148 2.190628e-18 3.795700e-14 1.725318e-15
23 7963545 7992302 NM_020825 CRAMP1L link to infopage 0.725001 2.242325e-18 3.885277e-14 1.689251e-15
24 7963545 7923372 NM_012396 PHLDA3 link to infopage 0.724420 2.458433e-18 4.259726e-14 1.774886e-15
25 7963545 7973468 NM_138360 LRRC16B link to infopage 0.723588 2.804021e-18 4.858528e-14 1.943411e-15
26 7963545 8131056 NM_017781 CYP2W1 link to infopage 0.723062 3.046274e-18 5.278280e-14 2.030108e-15
27 7963545 8016320 NM_203400 RPRML link to infopage 0.723032 3.061032e-18 5.303851e-14 1.964389e-15
28 7963545 8036151 NM_144617 HSPB6 link to infopage 0.722044 3.574613e-18 6.193732e-14 2.212047e-15
29 7963545 8116033 NM_000505 F12 link to infopage 0.721623 3.818122e-18 6.615660e-14 2.281262e-15
30 7963545 8112072 NM_021147 CCNO link to infopage 0.721552 3.860904e-18 6.689788e-14 2.229929e-15
31 7963545 8159670 NM_006647 NOXA1 link to infopage 0.721103 4.141590e-18 7.176133e-14 2.314882e-15
32 7963545 7921773 NM_030916 PVRL4 link to infopage 0.720847 4.310281e-18 7.468423e-14 2.333882e-15
33 7963545 8049536 NM_001137550 LRRFIP1 link to infopage 0.719189 5.576343e-18 9.662130e-14 2.927918e-15
34 7963545 7966189 NM_213596 FOXN4 link to infopage 0.719010 5.733000e-18 9.933569e-14 2.921638e-15
35 7963545 7937112 NM_017609 C10orf92 link to infopage 0.718565 6.141252e-18 1.064095e-13 3.040271e-15
36 7963545 8099406 NM_001189 NKX3-2 link to infopage 0.718333 6.365019e-18 1.102867e-13 3.063519e-15
37 7963545 7912004 NM_207370 GPR153 link to infopage 0.718242 6.454868e-18 1.118435e-13 3.022797e-15
38 7963545 8151623 NR_003594 REXO1L2P link to infopage 0.718107 6.589999e-18 1.141849e-13 3.004866e-15
39 7963545 8151607 NR_003594 REXO1L2P link to infopage 0.718107 6.589999e-18 1.141849e-13 2.927818e-15
40 7963545 8151603 NR_003594 REXO1L2P link to infopage 0.718107 6.589999e-18 1.141849e-13 2.854623e-15
41 7963545 7927307 NM_001630 ANXA8L2 link to infopage 0.718062 6.635898e-18 1.149802e-13 2.804395e-15
42 7963545 7913226 NM_012400 PLA2G2D link to infopage 0.718022 6.676746e-18 1.156880e-13 2.754476e-15
43 7963545 7937560 NM_002457 MUC2 link to infopage 0.716862 7.979682e-18 1.382639e-13 3.215441e-15
44 7963545 8142971 NM_138693 KLF14 link to infopage 0.715599 9.678065e-18 1.676918e-13 3.811178e-15
45 7963545 7919582 XR_039086 LOC100133075 link to infopage 0.715573 9.717302e-18 1.683717e-13 3.741593e-15
46 7963545 7949033 NM_014067 MACROD1 link to infopage 0.715366 1.002860e-17 1.737656e-13 3.777513e-15
47 7963545 8024754 NM_032607 CREB3L3 link to infopage 0.714722 1.106041e-17 1.916437e-13 4.077525e-15
48 7963545 8013465 NM_005557 KRT16 link to infopage 0.714641 1.119599e-17 1.939930e-13 4.041520e-15
49 7963545 8125383 NM_004557 NOTCH4 link to infopage 0.714610 1.124867e-17 1.949057e-13 3.977668e-15
50 7963545 7899075 NM_004455 EXTL1 link to infopage 0.714183 1.200153e-17 2.079506e-13 4.159012e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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