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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id Label1 AccNum GeneSym Info Gene Name
1943 8029273 NM_001410 MEGF8 link to infopage multiple EGF-like-domains 8
6645 8029236 NM_001410 MEGF8 link to infopage multiple EGF-like-domains 8

Fetching correlation data, please wait...
Getting list of correlations for id 1943.
Getting list of p-values for id 1943.
1 of 2 done.
Getting list of correlations for id 6645.
Getting list of p-values for id 6645.
2 of 2 done.
Calculating corrections for multiple testing (n=34654), please wait...
Done; whole program took 0.193 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8029236 8084929 NM_152672 OSTalpha link to infopage 0.728121 1.361696e-18 4.718821e-14 4.718821e-14
2 8029236 8046922 NM_000090 COL3A1 link to infopage 0.727549 1.492843e-18 5.173297e-14 2.586648e-14
3 8029236 7913450 NM_005529 HSPG2 link to infopage 0.726841 1.672238e-18 5.794973e-14 1.931658e-14
4 8029236 8019585 NM_030966 KRTAP1-3 link to infopage 0.724869 2.289805e-18 7.935089e-14 1.983772e-14
5 8029236 8015189 NM_030966 KRTAP1-3 link to infopage 0.724869 2.289805e-18 7.935089e-14 1.587018e-14
6 8029236 7946860 NM_000352 ABCC8 link to infopage 0.717950 6.752029e-18 2.339848e-13 3.899747e-14
7 8029236 8163548 NM_138424 KIF12 link to infopage 0.715155 1.035597e-17 3.588757e-13 5.126796e-14
8 8029236 8157818 NM_001045476 WDR38 link to infopage 0.713342 1.362945e-17 4.723150e-13 5.903938e-14
9 8029236 7951859 NM_000482 APOA4 link to infopage 0.712271 1.601608e-17 5.550211e-13 6.166901e-14
10 8029236 7957008 NM_007007 CPSF6 link to infopage -0.711769 1.726936e-17 5.984524e-13 5.984524e-14
11 8029236 8066757 NM_022829 SLC13A3 link to infopage 0.711535 1.788595e-17 6.198198e-13 5.634725e-14
12 8029236 7903632 NM_001408 CELSR2 link to infopage 0.709374 2.468374e-17 8.553902e-13 7.128252e-14
13 8029236 7936762 NM_001001976 ATE1 link to infopage -0.709034 2.596291e-17 8.997187e-13 6.920913e-14
14 8029236 8170716 NM_005393 PLXNB3 link to infopage 0.707292 3.358075e-17 1.163707e-12 8.312194e-14
15 8029236 8119435 NM_004828 NCR2 link to infopage 0.705195 4.565181e-17 1.582018e-12 1.054679e-13
16 8029236 8077192 NM_000482 APOA4 link to infopage 0.704498 5.053147e-17 1.751117e-12 1.094448e-13
17 8029236 8128356 NM_012160 FBXL4 link to infopage -0.704297 5.202721e-17 1.802951e-12 1.060559e-13
18 8029236 8067820 BC024764 IQSEC3 link to infopage 0.702832 6.433354e-17 2.229415e-12 1.238564e-13
19 8029236 8163086 NM_032012 C9orf5 link to infopage -0.702416 6.831474e-17 2.367379e-12 1.245989e-13
20 8029236 7992954 AK098732 TRAP1 link to infopage 0.702225 7.022385e-17 2.433537e-12 1.216769e-13
21 8029236 7918300 NM_001032290 PSRC1 link to infopage 0.700176 9.421776e-17 3.265022e-12 1.554773e-13
22 8029236 8116384 NM_175062 RASGEF1C link to infopage 0.698910 1.128367e-16 3.910244e-12 1.777384e-13
23 8029236 8125805 NM_000841 GRM4 link to infopage 0.698739 1.156108e-16 4.006377e-12 1.741903e-13
24 8029236 7987701 NM_016642 SPTBN5 link to infopage 0.698646 1.171540e-16 4.059854e-12 1.691606e-13
25 8029236 7973510 NM_006032 CPNE6 link to infopage 0.698482 1.199119e-16 4.155426e-12 1.662170e-13
26 8029236 8107897 NM_003687 PDLIM4 link to infopage 0.697026 1.473163e-16 5.105099e-12 1.963499e-13
27 8029236 7970262 NM_001008895 CUL4A link to infopage -0.697024 1.473638e-16 5.106747e-12 1.891388e-13
28 8029236 8137783 NM_001097620 TMEM184A link to infopage 0.696949 1.489290e-16 5.160987e-12 1.843210e-13
29 8029236 7896921 NM_152228 TAS1R3 link to infopage 0.695383 1.855881e-16 6.431371e-12 2.217714e-13
30 8029236 7995334 link to infopage 0.694228 2.181151e-16 7.558559e-12 2.519520e-13
31 8029236 7955305 NM_001652 AQP6 link to infopage 0.693667 2.358101e-16 8.171762e-12 2.636052e-13
32 8029236 8034643 NM_001127221 CACNA1A link to infopage 0.692573 2.745090e-16 9.512835e-12 2.972761e-13
33 8029236 8092201 NM_024665 TBL1XR1 link to infopage -0.692206 2.888081e-16 1.000836e-11 3.032835e-13
34 8029236 7940508 NM_006133 DAGLA link to infopage 0.692012 2.966259e-16 1.027927e-11 3.023316e-13
35 8029236 8147123 NM_005181 CA3 link to infopage 0.691730 3.084360e-16 1.068854e-11 3.053869e-13
36 8029236 7910265 NM_001098623 OBSCN link to infopage 0.688851 4.578130e-16 1.586505e-11 4.406959e-13
37 8029236 7998872 NR_026864 PRSS30P link to infopage 0.687813 5.272909e-16 1.827274e-11 4.938578e-13
38 8029236 7920616 NM_144622 DCST2 link to infopage 0.687812 5.273650e-16 1.827531e-11 4.809291e-13
39 8029236 7928937 NM_004897 MINPP1 link to infopage -0.686618 6.199950e-16 2.148531e-11 5.509053e-13
40 8029236 8092473 NM_004366 CLCN2 link to infopage 0.686454 6.338845e-16 2.196663e-11 5.491658e-13
41 8029236 8001014 NM_173502 PRSS36 link to infopage 0.685415 7.292560e-16 2.527164e-11 6.163814e-13
42 8029236 8148658 NM_014789 ZNF623 link to infopage -0.685009 7.701291e-16 2.668805e-11 6.354298e-13
43 8029236 8017488 NM_022640 CSH1 link to infopage 0.685002 7.708618e-16 2.671344e-11 6.212429e-13
44 8029236 8049509 NM_015893 PRLH link to infopage 0.684937 7.776830e-16 2.694983e-11 6.124961e-13
45 8029236 8135099 NM_133457 EMID2 link to infopage 0.684833 7.885840e-16 2.732759e-11 6.072798e-13
46 8029236 8166661 ENST00000327781 link to infopage 0.684546 8.195816e-16 2.840178e-11 6.174300e-13
47 8029236 8024768 NM_133475 ANKRD24 link to infopage 0.684123 8.673698e-16 3.005783e-11 6.395284e-13
48 8029236 7899562 NM_133178 PTPRU link to infopage 0.684044 8.765169e-16 3.037482e-11 6.328087e-13
49 8029236 8131205 NM_152744 SDK1 link to infopage 0.683760 9.105020e-16 3.155254e-11 6.439293e-13
50 8029236 7937560 NM_002457 MUC2 link to infopage 0.683438 9.505055e-16 3.293882e-11 6.587764e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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