[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6810	7918300	NM_001032290	PSRC1		proline/serine-rich coiled-coil 1

Fetching correlation data, please wait...
Getting list of correlations for id 6810.
Getting list of p-values for id 6810.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.134 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7918300	7996393	NM_001755	CBFB	-0.756993	9.492203e-21	1.644714e-16	1.644714e-16
2	7918300	7917156	NM_003902	FUBP1	-0.751401	2.618244e-20	4.536631e-16	2.268315e-16
3	7918300	7903239	NM_000028	AGL	-0.746967	5.744326e-20	9.953193e-16	3.317731e-16
4	7918300	7936762	NM_001001976	ATE1	-0.744846	8.316721e-20	1.441038e-15	3.602596e-16
5	7918300	7913450	NM_005529	HSPG2	0.742714	1.202106e-19	2.082890e-15	4.165779e-16
6	7918300	7910265	NM_001098623	OBSCN	0.736992	3.173784e-19	5.499215e-15	9.165358e-16
7	7918300	8173713	NM_032121	MAGT1	-0.735431	4.118343e-19	7.135853e-15	1.019408e-15
8	7918300	7988713	NM_017672	TRPM7	-0.735089	4.359015e-19	7.552865e-15	9.441081e-16
9	7918300	8097373	BC034253	C4orf29	-0.734211	5.042142e-19	8.736519e-15	9.707243e-16
10	7918300	8054614	NM_022662	ANAPC1	-0.734021	5.202709e-19	9.014735e-15	9.014735e-16
11	7918300	7975562	NM_173462	PAPLN	0.732582	6.594468e-19	1.142624e-14	1.038749e-15
12	7918300	7974771	NM_022495	C14orf135	-0.732126	7.106330e-19	1.231314e-14	1.026095e-15
13	7918300	8000192	ENST00000198767		-0.731927	7.341683e-19	1.272093e-14	9.785334e-16
14	7918300	8048014	NM_199229	RPE	-0.731794	7.502546e-19	1.299966e-14	9.285473e-16
15	7918300	8087596	NM_003549	HYAL3	0.730977	8.573393e-19	1.485512e-14	9.903412e-16
16	7918300	8053725	NM_000798	DRD5	0.729494	1.090990e-18	1.890358e-14	1.181474e-15
17	7918300	8163795	NM_005047	PSMD5	-0.728902	1.200592e-18	2.080266e-14	1.223686e-15
18	7918300	8047641	NM_177538	CYP20A1	-0.725724	1.998559e-18	3.462904e-14	1.923835e-15
19	7918300	7971150	NM_005780	LHFP	0.724562	2.403752e-18	4.164981e-14	2.192095e-15
20	7918300	7952290	NM_012101	TRIM29	0.723465	2.858837e-18	4.953506e-14	2.476753e-15
21	7918300	8001666	NM_001896	CSNK2A2	-0.722765	3.192098e-18	5.530948e-14	2.633785e-15
22	7918300	8056909	NM_001880	ATF2	-0.722510	3.322662e-18	5.757177e-14	2.616899e-15
23	7918300	8096556	NM_015143	METAP1	-0.722140	3.521189e-18	6.101164e-14	2.652680e-15
24	7918300	7957008	NM_007007	CPSF6	-0.722051	3.570782e-18	6.187093e-14	2.577956e-15
25	7918300	7906852	NM_175866	UHMK1	-0.721971	3.615783e-18	6.265067e-14	2.506027e-15
26	7918300	7913300	NM_016287	HP1BP3	-0.721298	4.017006e-18	6.960267e-14	2.677026e-15
27	7918300	8156783	NM_001855	COL15A1	0.721284	4.026109e-18	6.976039e-14	2.583718e-15
28	7918300	7979367	NM_006544	EXOC5	-0.720966	4.231038e-18	7.331120e-14	2.618257e-15
29	7918300	8084971	NM_152699	SENP5	-0.720887	4.283406e-18	7.421858e-14	2.559261e-15
30	7918300	8135576	NM_015641	TES	-0.720860	4.301092e-18	7.452503e-14	2.484168e-15
31	7918300	7903281	NM_012243	SLC35A3	-0.720647	4.446695e-18	7.704788e-14	2.485416e-15
32	7918300	8104838	NM_194283	DNAJC21	-0.720635	4.454998e-18	7.719174e-14	2.412242e-15
33	7918300	8132070	NM_002047	GARS	-0.719420	5.380267e-18	9.322388e-14	2.824966e-15
34	7918300	7905025	NM_000798	DRD5	0.719228	5.542235e-18	9.603030e-14	2.824421e-15
35	7918300	7904340	NM_006699	MAN1A2	-0.719186	5.578719e-18	9.666247e-14	2.761785e-15
36	7918300	8046604	NM_003659	AGPS	-0.718940	5.795240e-18	1.004141e-13	2.789281e-15
37	7918300	8024754	NM_032607	CREB3L3	0.718871	5.857566e-18	1.014941e-13	2.743082e-15
38	7918300	7903369	NM_133496	SLC30A7	-0.718118	6.579474e-18	1.140025e-13	3.000067e-15
39	7918300	8107406	ENST00000410774		0.718099	6.598605e-18	1.143340e-13	2.931642e-15
40	7918300	8101228	NM_144571	CNOT6L	-0.718081	6.616851e-18	1.146502e-13	2.866254e-15
41	7918300	8034643	NM_001127221	CACNA1A	0.717933	6.768915e-18	1.172850e-13	2.860609e-15
42	7918300	8104998	NM_018034	WDR70	-0.717778	6.932194e-18	1.201141e-13	2.859860e-15
43	7918300	8051622	NM_001031684	SRSF7	-0.717575	7.152275e-18	1.239275e-13	2.882034e-15
44	7918300	7947991	NM_015231	NUP160	-0.717094	7.700680e-18	1.334297e-13	3.032493e-15
45	7918300	8159624	BC052297	C9orf169	0.717057	7.744952e-18	1.341968e-13	2.982151e-15
46	7918300	8049934	NM_022134	GAL3ST2	0.716983	7.832826e-18	1.357194e-13	2.950421e-15
47	7918300	8009353	NM_181671	PITPNC1	-0.716723	8.150964e-18	1.412318e-13	3.004931e-15
48	7918300	7916443	NM_015306	USP24	-0.716534	8.391175e-18	1.453939e-13	3.029039e-15
49	7918300	8108453	NM_032289	PSD2	0.716392	8.574827e-18	1.485760e-13	3.032164e-15
50	7918300	8120698	NM_133645	MTO1	-0.716375	8.597241e-18	1.489644e-13	2.979288e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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