[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
5560 8087596 NM_003549 HYAL3 link to infopage hyaluronoglucosaminidase 3

Fetching correlation data, please wait...
Getting list of correlations for id 5560.
Getting list of p-values for id 5560.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.139 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8087596 7998015 NM_032451 SPIRE2 link to infopage 0.809620 1.413553e-25 2.449263e-21 2.449263e-21
2 8087596 8073449 NM_014460 CSDC2 link to infopage 0.787732 2.107318e-23 3.651349e-19 1.825675e-19
3 8087596 7952893 BC024764 IQSEC3 link to infopage 0.784826 3.917716e-23 6.788227e-19 2.262742e-19
4 8087596 7934544 NM_144589 COMTD1 link to infopage 0.784638 4.076277e-23 7.062965e-19 1.765741e-19
5 8087596 8125234 NM_019105 TNXB link to infopage 0.782996 5.760492e-23 9.981204e-19 1.996241e-19
6 8087596 8062948 NM_014276 RBPJL link to infopage 0.782354 6.588693e-23 1.141623e-18 1.902705e-19
7 8087596 8131056 NM_017781 CYP2W1 link to infopage 0.776871 2.038882e-22 3.532770e-18 5.046814e-19
8 8087596 8076169 NM_014293 NPTXR link to infopage 0.776486 2.204344e-22 3.819467e-18 4.774334e-19
9 8087596 8153704 NM_031309 SCRT1 link to infopage 0.775690 2.589453e-22 4.486746e-18 4.985273e-19
10 8087596 8150928 NM_003580 NSMAF link to infopage -0.775617 2.627901e-22 4.553363e-18 4.553363e-19
11 8087596 8016168 NM_133373 PLCD3 link to infopage 0.771459 6.027306e-22 1.044351e-17 9.494103e-19
12 8087596 8163599 NM_015404 DFNB31 link to infopage 0.770786 6.882205e-22 1.192480e-17 9.937330e-19
13 8087596 8126018 NM_007271 STK38 link to infopage -0.769760 8.418743e-22 1.458716e-17 1.122089e-18
14 8087596 8087907 NM_020163 SEMA3G link to infopage 0.768871 1.001502e-21 1.735303e-17 1.239502e-18
15 8087596 7935535 NM_018058 CRTAC1 link to infopage 0.768761 1.023169e-21 1.772846e-17 1.181897e-18
16 8087596 7945162 NM_003658 BARX2 link to infopage 0.768738 1.027758e-21 1.780796e-17 1.112998e-18
17 8087596 8153346 NM_023946 LYNX1 link to infopage 0.768056 1.173571e-21 2.033446e-17 1.196145e-18
18 8087596 8074131 NM_001080420 SHANK3 link to infopage 0.767046 1.427067e-21 2.472679e-17 1.373710e-18
19 8087596 8169519 NM_019045 WDR44 link to infopage -0.766920 1.462333e-21 2.533784e-17 1.333570e-18
20 8087596 8035648 NM_001001524 TM6SF2 link to infopage 0.765125 2.064962e-21 3.577960e-17 1.788980e-18
21 8087596 7998668 NM_144603 NOXO1 link to infopage 0.764596 2.284629e-21 3.958577e-17 1.885037e-18
22 8087596 8074063 NM_024866 ADM2 link to infopage 0.762427 3.448499e-21 5.975214e-17 2.716007e-18
23 8087596 7911413 NM_003327 TNFRSF4 link to infopage 0.761283 4.277398e-21 7.411448e-17 3.222369e-18
24 8087596 8078187 NM_015184 PLCL2 link to infopage -0.760919 4.579518e-21 7.934931e-17 3.306221e-18
25 8087596 7991459 NM_020211 RGMA link to infopage 0.760345 5.099161e-21 8.835317e-17 3.534127e-18
26 8087596 7949080 NM_015080 NRXN2 link to infopage 0.759510 5.958550e-21 1.032438e-16 3.970915e-18
27 8087596 8137151 NM_198455 SSPO link to infopage 0.759245 6.259941e-21 1.084660e-16 4.017259e-18
28 8087596 8159036 NM_139025 ADAMTS13 link to infopage 0.758791 6.810150e-21 1.179995e-16 4.214267e-18
29 8087596 7971820 NM_016075 VPS36 link to infopage -0.758683 6.947523e-21 1.203797e-16 4.151025e-18
30 8087596 7931519 NM_152643 KNDC1 link to infopage 0.756828 9.785433e-21 1.695522e-16 5.651740e-18
31 8087596 8128669 NM_014028 OSTM1 link to infopage -0.756648 1.011388e-20 1.752433e-16 5.653009e-18
32 8087596 7911941 NM_015557 CHD5 link to infopage 0.756310 1.076034e-20 1.864444e-16 5.826387e-18
33 8087596 8165406 NM_015392 NPDC1 link to infopage 0.756135 1.111070e-20 1.925150e-16 5.833789e-18
34 8087596 8170965 NM_139250 CTAG1A link to infopage 0.756087 1.120847e-20 1.942092e-16 5.712035e-18
35 8087596 8176149 NM_139250 CTAG1A link to infopage 0.756087 1.120847e-20 1.942092e-16 5.548834e-18
36 8087596 8036252 NM_015526 CLIP3 link to infopage 0.755998 1.139234e-20 1.973951e-16 5.483197e-18
37 8087596 7912004 NM_207370 GPR153 link to infopage 0.755247 1.306968e-20 2.264583e-16 6.120495e-18
38 8087596 7927367 NM_001040084 ANXA8 link to infopage 0.755181 1.322790e-20 2.291998e-16 6.031575e-18
39 8087596 7986822 NM_000814 GABRB3 link to infopage 0.754623 1.464226e-20 2.537064e-16 6.505291e-18
40 8087596 7966189 NM_213596 FOXN4 link to infopage 0.754220 1.575209e-20 2.729365e-16 6.823412e-18
41 8087596 8000467 NM_001109763 GSG1L link to infopage 0.753102 1.928420e-20 3.341373e-16 8.149690e-18
42 8087596 7949015 NM_001144936 C11orf95 link to infopage 0.752979 1.971693e-20 3.416352e-16 8.134172e-18
43 8087596 7923762 NM_018203 KLHDC8A link to infopage 0.752961 1.978234e-20 3.427685e-16 7.971361e-18
44 8087596 8049598 NM_194312 ESPNL link to infopage 0.752938 1.986509e-20 3.442024e-16 7.822781e-18
45 8087596 7975113 NM_145165 CHURC1 link to infopage -0.752900 2.000041e-20 3.465471e-16 7.701047e-18
46 8087596 7896822 NM_198576 AGRN link to infopage 0.752107 2.306867e-20 3.997109e-16 8.689368e-18
47 8087596 8178322 NM_006937 SUMO2 link to infopage -0.751561 2.544209e-20 4.408351e-16 9.379471e-18
48 8087596 8060134 NM_004321 KIF1A link to infopage 0.751484 2.579553e-20 4.469592e-16 9.311649e-18
49 8087596 7923372 NM_012396 PHLDA3 link to infopage 0.751418 2.610305e-20 4.522875e-16 9.230357e-18
50 8087596 8074223 NM_031890 CECR6 link to infopage 0.751284 2.673710e-20 4.632737e-16 9.265473e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!